RNA–Protein interactions for RNA: ENST00000468480.5

RNF6-204, Transcript of ring finger protein 6, human

TSL 1 (best)

Gene RNF6, Length 1,105 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF6-204	ENST00000468480	ANKRD35	Q8N283	1001 aa		18.2	■□□□□ 0.5
RNF6-204	ENST00000468480	MSL3	Q8N5Y2	521 aa	Known RBP	18.2	■□□□□ 0.5
RNF6-204	ENST00000468480	TC2N	Q8N9U0	490 aa		18.2	■□□□□ 0.5
RNF6-204	ENST00000468480	IL31RA	Q8NI17	732 aa		18.2	■□□□□ 0.5
RNF6-204	ENST00000468480	KHSRP	Q92945	711 aa	Known RBP eCLIP	18.2	■□□□□ 0.5
RNF6-204	ENST00000468480	ATP6V0A1	Q93050	837 aa		18.2	■□□□□ 0.5
RNF6-204	ENST00000468480	VTI1A	Q96AJ9	217 aa		18.2	■□□□□ 0.5
RNF6-204	ENST00000468480	MRPL44	Q9H9J2	332 aa	Known RBP	18.2	■□□□□ 0.5
RNF6-204	ENST00000468480	A1CF	Q9NQ94	594 aa	Known RBP	18.2	■□□□□ 0.5
RNF6-204	ENST00000468480	ANKEF1	Q9NU02	776 aa		18.2	■□□□□ 0.5
RNF6-204	ENST00000468480	ZNHIT6	Q9NWK9	470 aa	Known RBP	18.2	■□□□□ 0.5
RNF6-204	ENST00000468480	PCDHB13	Q9Y5F0	798 aa		18.2	■□□□□ 0.5
RNF6-204	ENST00000468480	RFXAP	O00287	272 aa		18.19	■□□□□ 0.5
RNF6-204	ENST00000468480	DHX15	O43143	795 aa	Known RBP	18.19	■□□□□ 0.5
RNF6-204	ENST00000468480	FGB	P02675	491 aa		18.19	■□□□□ 0.5
RNF6-204	ENST00000468480	MAPT	P10636	758 aa	Known RBP	18.19	■□□□□ 0.5
RNF6-204	ENST00000468480	GJA9	P57773	515 aa		18.19	■□□□□ 0.5
RNF6-204	ENST00000468480	RBL2	Q08999	1139 aa		18.19	■□□□□ 0.5
RNF6-204	ENST00000468480	ACVR2B	Q13705	512 aa		18.19	■□□□□ 0.5
RNF6-204	ENST00000468480	KNOP1	Q1ED39	458 aa	Known RBP	18.19	■□□□□ 0.5
RNF6-204	ENST00000468480	VWA3B	Q502W6	1294 aa		18.19	■□□□□ 0.5
RNF6-204	ENST00000468480	ZCWPW2	Q504Y3	356 aa		18.19	■□□□□ 0.5
RNF6-204	ENST00000468480	C1orf186	Q6ZWK4	172 aa		18.19	■□□□□ 0.5
RNF6-204	ENST00000468480	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	18.19	■□□□□ 0.5
RNF6-204	ENST00000468480	OTUD6A	Q7L8S5	288 aa		18.19	■□□□□ 0.5
RNF6-204	ENST00000468480	SFR1	Q86XK3	245 aa		18.19	■□□□□ 0.5
RNF6-204	ENST00000468480	PCSK9	Q8NBP7	692 aa	Known RBP	18.19	■□□□□ 0.5
RNF6-204	ENST00000468480	PCMTD1	Q96MG8	357 aa	Predicted RBP	18.19	■□□□□ 0.5
RNF6-204	ENST00000468480	ERGIC2	Q96RQ1	377 aa		18.19	■□□□□ 0.5
RNF6-204	ENST00000468480	C11orf16	Q9NQ32	467 aa		18.19	■□□□□ 0.5
RNF6-204	ENST00000468480	TYW1	Q9NV66	732 aa	Known RBP	18.19	■□□□□ 0.5
RNF6-204	ENST00000468480	LARS	Q9P2J5	1176 aa	Known RBP	18.19	■□□□□ 0.5
RNF6-204	ENST00000468480	KCNG1	Q9UIX4	513 aa		18.19	■□□□□ 0.5
RNF6-204	ENST00000468480	TRAF3IP3	Q9Y228	551 aa		18.19	■□□□□ 0.5
RNF6-204	ENST00000468480	LUC7L2	Q9Y383	392 aa	Known RBP	18.19	■□□□□ 0.5
RNF6-204	ENST00000468480	ARIH1	Q9Y4X5	557 aa	Predicted RBP	18.19	■□□□□ 0.5
RNF6-204	ENST00000468480	LOC102724159	A0A0B4J2E5	919 aa		18.18	■□□□□ 0.5
RNF6-204	ENST00000468480	DDX39A	O00148	427 aa	Known RBP	18.18	■□□□□ 0.5
RNF6-204	ENST00000468480	EIF3J	O75822	258 aa	Known RBP	18.18	■□□□□ 0.5
RNF6-204	ENST00000468480	PSAP	P07602	524 aa		18.18	■□□□□ 0.5
RNF6-204	ENST00000468480	ABCD1	P33897	745 aa		18.18	■□□□□ 0.5
RNF6-204	ENST00000468480	MARS	P56192	900 aa	Known RBP	18.18	■□□□□ 0.5
RNF6-204	ENST00000468480	ITGB3BP	Q13352	177 aa	Predicted RBP	18.18	■□□□□ 0.5
RNF6-204	ENST00000468480	PWP2	Q15269	919 aa	Known RBP	18.18	■□□□□ 0.5
RNF6-204	ENST00000468480	GNAS	Q5JWF2	1037 aa		18.18	■□□□□ 0.5
RNF6-204	ENST00000468480	PPP2R2D	Q66LE6	453 aa		18.18	■□□□□ 0.5
RNF6-204	ENST00000468480	CYP26C1	Q6V0L0	522 aa		18.18	■□□□□ 0.5
RNF6-204	ENST00000468480	ZC3H3	Q8IXZ2	948 aa	Known RBP	18.18	■□□□□ 0.5
RNF6-204	ENST00000468480	MYCT1	Q8N699	235 aa		18.18	■□□□□ 0.5
RNF6-204	ENST00000468480	TET1	Q8NFU7	2136 aa		18.18	■□□□□ 0.5
RNF6-204	ENST00000468480	ZNF507	Q8TCN5	953 aa		18.18	■□□□□ 0.5
RNF6-204	ENST00000468480	PIGO	Q8TEQ8	1089 aa		18.18	■□□□□ 0.5
RNF6-204	ENST00000468480	HPS3	Q969F9	1004 aa		18.18	■□□□□ 0.5
RNF6-204	ENST00000468480	DRC1	Q96MC2	740 aa		18.18	■□□□□ 0.5
RNF6-204	ENST00000468480	RUSC1	Q9BVN2	902 aa		18.18	■□□□□ 0.5
RNF6-204	ENST00000468480	EDEM3	Q9BZQ6	932 aa		18.18	■□□□□ 0.5
RNF6-204	ENST00000468480	WNT8A	Q9H1J5	351 aa		18.18	■□□□□ 0.5
RNF6-204	ENST00000468480	TSPYL2	Q9H2G4	693 aa	Predicted RBP	18.18	■□□□□ 0.5
RNF6-204	ENST00000468480	METTL14	Q9HCE5	456 aa	Known RBP	18.18	■□□□□ 0.5
RNF6-204	ENST00000468480	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	18.18	■□□□□ 0.5
RNF6-204	ENST00000468480	ASTN1	O14525	1302 aa		18.18	■□□□□ 0.5
RNF6-204	ENST00000468480	NPHP3-ACAD11	A0A0J9YXS1	232 aa		18.17	■□□□□ 0.5
RNF6-204	ENST00000468480		A0A1W2PQJ5	194 aa		18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	SLC16A3	O15427	465 aa	Known RBP	18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	TLR3	O15455	904 aa	Known RBP	18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	GCNT3	O95395	438 aa		18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	TNNT1	P13805	278 aa		18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	TRIM21	P19474	475 aa	Known RBP	18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	ZNF131	P52739	623 aa		18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	CCL23	P55773	120 aa		18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	BEX3	Q00994	111 aa		18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	NFIL3	Q16649	462 aa		18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	LRRC55	Q6ZSA7	311 aa		18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	EPM2AIP1	Q7L775	607 aa	Predicted RBP	18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	HS2ST1	Q7LGA3	356 aa		18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	C17orf53	Q8N3J3	647 aa	Predicted RBP	18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	SLC43A3	Q8NBI5	491 aa		18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	BANK1	Q8NDB2	785 aa		18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	OR8K1	Q8NGG5	319 aa		18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	SCFD1	Q8WVM8	642 aa		18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	KATNBL1	Q9H079	304 aa		18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	NDST4	Q9H3R1	872 aa		18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	HIPK3	Q9H422	1215 aa		18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	CGN	Q9P2M7	1197 aa	Known RBP	18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	CAPN11	Q9UMQ6	739 aa		18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	HCN4	Q9Y3Q4	1203 aa		18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	R3HCC1	Q9Y3T6	440 aa	Known RBP	18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	PCDHA10	Q9Y5I2	948 aa		18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	MTCH2	Q9Y6C9	303 aa		18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	GRIN2D	O15399	1336 aa		18.17	■□□□□ 0.5
RNF6-204	ENST00000468480	TANC1	Q9C0D5	1861 aa		18.16	■□□□□ 0.5
RNF6-204	ENST00000468480	EPOP	A6NHQ4	379 aa		18.16	■□□□□ 0.5
RNF6-204	ENST00000468480	GYPC	P04921	128 aa		18.16	■□□□□ 0.5
RNF6-204	ENST00000468480	FECH	P22830	423 aa		18.16	■□□□□ 0.5
RNF6-204	ENST00000468480	CASP14	P31944	242 aa		18.16	■□□□□ 0.5
RNF6-204	ENST00000468480	ICAM3	P32942	547 aa		18.16	■□□□□ 0.5
RNF6-204	ENST00000468480	ADK	P55263	362 aa	Known RBP	18.16	■□□□□ 0.5
RNF6-204	ENST00000468480	SNRPF	P62306	86 aa	Known RBP	18.16	■□□□□ 0.5
RNF6-204	ENST00000468480	RAD51AP2	Q09MP3	1159 aa		18.16	■□□□□ 0.5
RNF6-204	ENST00000468480	MIS18BP1	Q6P0N0	1132 aa		18.16	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 19 ms