RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 H0YCG3 227 aa22.52■■□□□ 1.2
TMEM53-207ENST00000468117 HOXD8P13378 290 aaPredicted RBP22.52■■□□□ 1.2
TMEM53-207ENST00000468117 CAPSQ13938 189 aa22.52■■□□□ 1.2
TMEM53-207ENST00000468117 MYBPC2Q14324 1141 aa22.52■■□□□ 1.2
TMEM53-207ENST00000468117 DGKDQ16760 1214 aa22.52■■□□□ 1.2
TMEM53-207ENST00000468117 IER5Q5VY09 327 aa22.52■■□□□ 1.2
TMEM53-207ENST00000468117 C12orf56Q8IXR9 622 aa22.52■■□□□ 1.2
TMEM53-207ENST00000468117 DEPTORQ8TB45 409 aa22.52■■□□□ 1.2
TMEM53-207ENST00000468117 PANX2Q96RD6 677 aa22.52■■□□□ 1.2
TMEM53-207ENST00000468117 TTYH3Q9C0H2 523 aa22.52■■□□□ 1.2
TMEM53-207ENST00000468117 HSPBP1Q9NZL4 362 aa22.52■■□□□ 1.2
TMEM53-207ENST00000468117 HTTP42858 3142 aa22.52■■□□□ 1.2
TMEM53-207ENST00000468117 YY1P25490 414 aa22.52■■□□□ 1.19
TMEM53-207ENST00000468117 ADSSP30520 456 aa22.52■■□□□ 1.19
TMEM53-207ENST00000468117 KRT9P35527 623 aa22.52■■□□□ 1.19
TMEM53-207ENST00000468117 SNRPFP62306 86 aaKnown RBP22.52■■□□□ 1.19
TMEM53-207ENST00000468117 KCNMA1Q12791 1236 aa22.52■■□□□ 1.19
TMEM53-207ENST00000468117 SLC39A4Q6P5W5 647 aa22.52■■□□□ 1.19
TMEM53-207ENST00000468117 TLK2Q86UE8 772 aa22.52■■□□□ 1.19
TMEM53-207ENST00000468117 EXOC8Q8IYI6 725 aa22.52■■□□□ 1.19
TMEM53-207ENST00000468117 ZSWIM2Q8NEG5 633 aa22.52■■□□□ 1.19
TMEM53-207ENST00000468117 TMEM174Q8WUU8 243 aa22.52■■□□□ 1.19
TMEM53-207ENST00000468117 SLC35C1Q96A29 364 aa22.52■■□□□ 1.19
TMEM53-207ENST00000468117 MMRN2Q9H8L6 949 aa22.52■■□□□ 1.19
TMEM53-207ENST00000468117 FAM207AQ9NSI2 230 aaPredicted RBP22.52■■□□□ 1.19
TMEM53-207ENST00000468117 ZNF215Q9UL58 517 aaPredicted RBP22.52■■□□□ 1.19
TMEM53-207ENST00000468117 HNRNPDLO14979 420 aaKnown RBP22.51■■□□□ 1.19
TMEM53-207ENST00000468117 GAS2O43903 313 aaKnown RBP22.51■■□□□ 1.19
TMEM53-207ENST00000468117 IRX5P78411 483 aaPredicted RBP22.51■■□□□ 1.19
TMEM53-207ENST00000468117 CAP1Q01518 475 aa22.51■■□□□ 1.19
TMEM53-207ENST00000468117 NOLC1Q14978 699 aaKnown RBP eCLIP22.51■■□□□ 1.193e-11■□□□□ 9.8
TMEM53-207ENST00000468117 TCP11Q8WWU5 503 aa22.51■■□□□ 1.19
TMEM53-207ENST00000468117 CRACR2AQ9BSW2 395 aa22.51■■□□□ 1.19
TMEM53-207ENST00000468117 NUP58Q9BVL2 599 aa22.51■■□□□ 1.19
TMEM53-207ENST00000468117 ABHD10Q9NUJ1 306 aa22.51■■□□□ 1.19
TMEM53-207ENST00000468117 AGPAT5Q9NUQ2 364 aa22.51■■□□□ 1.19
TMEM53-207ENST00000468117 CAPN11Q9UMQ6 739 aa22.51■■□□□ 1.19
TMEM53-207ENST00000468117 A6NJR5 290 aa22.5■■□□□ 1.19
TMEM53-207ENST00000468117 AFPP02771 609 aaKnown RBP22.5■■□□□ 1.19
TMEM53-207ENST00000468117 FLT3LGP49771 235 aa22.5■■□□□ 1.19
TMEM53-207ENST00000468117 PPP2R3AQ06190 1150 aa22.5■■□□□ 1.19
TMEM53-207ENST00000468117 ZNF484Q5JVG2 852 aa22.5■■□□□ 1.19
TMEM53-207ENST00000468117 EFCAB12Q6NXP0 572 aa22.5■■□□□ 1.19
TMEM53-207ENST00000468117 REM2Q8IYK8 340 aaPredicted RBP22.5■■□□□ 1.19
TMEM53-207ENST00000468117 METTL13Q8N6R0 699 aa22.5■■□□□ 1.19
TMEM53-207ENST00000468117 XXYLT1Q8NBI6 393 aa22.5■■□□□ 1.19
TMEM53-207ENST00000468117 RETREG2Q8NC44 543 aa22.5■■□□□ 1.19
TMEM53-207ENST00000468117 PSPC1Q8WXF1 523 aaKnown RBP22.5■■□□□ 1.19
TMEM53-207ENST00000468117 BICD1Q96G01 975 aa22.5■■□□□ 1.19
TMEM53-207ENST00000468117 USP20Q9Y2K6 914 aa22.5■■□□□ 1.19
TMEM53-207ENST00000468117 LUC7L2Q9Y383 392 aaKnown RBP22.5■■□□□ 1.19
TMEM53-207ENST00000468117 EPHB6O15197 1021 aa22.5■■□□□ 1.19
TMEM53-207ENST00000468117 C22orf31O95567 290 aa22.5■■□□□ 1.19
TMEM53-207ENST00000468117 LAMTOR4Q0VGL1 99 aa22.5■■□□□ 1.19
TMEM53-207ENST00000468117 JPH2Q9BR39 696 aaPredicted RBP22.5■■□□□ 1.19
TMEM53-207ENST00000468117 K7ERI5 159 aa22.49■■□□□ 1.19
TMEM53-207ENST00000468117 STX10O60499 249 aa22.49■■□□□ 1.19
TMEM53-207ENST00000468117 GJB1P08034 283 aa22.49■■□□□ 1.19
TMEM53-207ENST00000468117 ABCD1P33897 745 aa22.49■■□□□ 1.19
TMEM53-207ENST00000468117 CLCN3P51790 818 aa22.49■■□□□ 1.19
TMEM53-207ENST00000468117 STRN3Q13033 797 aa22.49■■□□□ 1.19
TMEM53-207ENST00000468117 BRDTQ58F21 947 aaPredicted RBP22.49■■□□□ 1.19
TMEM53-207ENST00000468117 TRIB2Q92519 343 aa22.49■■□□□ 1.19
TMEM53-207ENST00000468117 CCDC51Q96ER9 411 aa22.49■■□□□ 1.19
TMEM53-207ENST00000468117 SUCLA2Q9P2R7 463 aaPredicted RBP22.49■■□□□ 1.19
TMEM53-207ENST00000468117 CASP8AP2Q9UKL3 1982 aa22.49■■□□□ 1.19
TMEM53-207ENST00000468117 DNAH12Q6ZR08 3092 aa22.49■■□□□ 1.19
TMEM53-207ENST00000468117 GOLGA8IPA6NC78 632 aa22.48■■□□□ 1.19
TMEM53-207ENST00000468117 GOLGA8JA6NMD2 632 aa22.48■■□□□ 1.19
TMEM53-207ENST00000468117 ADCY3O60266 1144 aa22.48■■□□□ 1.19
TMEM53-207ENST00000468117 TRPA1O75762 1119 aa22.48■■□□□ 1.19
TMEM53-207ENST00000468117 SRGAP2CP0DJJ0 459 aa22.48■■□□□ 1.19
TMEM53-207ENST00000468117 SP3Q02447 781 aa22.48■■□□□ 1.19
TMEM53-207ENST00000468117 PRKCZQ05513 592 aa22.48■■□□□ 1.19
TMEM53-207ENST00000468117 MXD4Q14582 209 aaPredicted RBP22.48■■□□□ 1.19
TMEM53-207ENST00000468117 FIGNQ5HY92 759 aa22.48■■□□□ 1.19
TMEM53-207ENST00000468117 RHPN2Q8IUC4 686 aa22.48■■□□□ 1.19
TMEM53-207ENST00000468117 KLRC1P26715 233 aa22.48■■□□□ 1.19
TMEM53-207ENST00000468117 CLCN1P35523 988 aa22.48■■□□□ 1.19
TMEM53-207ENST00000468117 RNF149Q8NC42 400 aa22.48■■□□□ 1.19
TMEM53-207ENST00000468117 POMGNT1Q8WZA1 660 aa22.48■■□□□ 1.19
TMEM53-207ENST00000468117 KCNN1Q92952 543 aa22.48■■□□□ 1.19
TMEM53-207ENST00000468117 SAAL1Q96ER3 474 aa22.48■■□□□ 1.19
TMEM53-207ENST00000468117 ARHGAP6O43182 974 aa22.47■■□□□ 1.19
TMEM53-207ENST00000468117 TRIM49P0CI25 452 aa22.47■■□□□ 1.19
TMEM53-207ENST00000468117 TRIM49CP0CI26 452 aa22.47■■□□□ 1.19
TMEM53-207ENST00000468117 CHMP4BP1P59074 171 aa22.47■■□□□ 1.19
TMEM53-207ENST00000468117 BFSP1Q12934 665 aa22.47■■□□□ 1.19
TMEM53-207ENST00000468117 TRPV1Q8NER1 839 aa22.47■■□□□ 1.19
TMEM53-207ENST00000468117 ZNF668Q96K58 619 aaPredicted RBP22.47■■□□□ 1.19
TMEM53-207ENST00000468117 SPTLC3Q9NUV7 552 aa22.47■■□□□ 1.19
TMEM53-207ENST00000468117 EDN1P05305 212 aa22.47■■□□□ 1.19
TMEM53-207ENST00000468117 SCP2P22307 547 aa22.47■■□□□ 1.19
TMEM53-207ENST00000468117 LIG4P49917 911 aa22.47■■□□□ 1.19
TMEM53-207ENST00000468117 HTRA3P83110 453 aa22.47■■□□□ 1.19
TMEM53-207ENST00000468117 APBA1Q02410 837 aa22.47■■□□□ 1.19
TMEM53-207ENST00000468117 E4F1Q66K89 784 aaPredicted RBP22.47■■□□□ 1.19
TMEM53-207ENST00000468117 NEK11Q8NG66 645 aa22.47■■□□□ 1.19
TMEM53-207ENST00000468117 OR8K1Q8NGG5 319 aa22.47■■□□□ 1.19
TMEM53-207ENST00000468117 COL1A2P08123 1366 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms