RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 CSPP1Q1MSJ5 1256 aa16.51■□□□□ 0.23
ATPAF2-204ENST00000467560 UBXN11Q5T124 520 aa16.51■□□□□ 0.23
ATPAF2-204ENST00000467560 TPH2Q8IWU9 490 aa16.51■□□□□ 0.23
ATPAF2-204ENST00000467560 SLFN12Q8IYM2 578 aa16.51■□□□□ 0.23
ATPAF2-204ENST00000467560 BCL7CQ8WUZ0 217 aaPredicted RBP16.51■□□□□ 0.23
ATPAF2-204ENST00000467560 SLC7A3Q8WY07 619 aa16.51■□□□□ 0.23
ATPAF2-204ENST00000467560 MTMR9Q96QG7 549 aa16.51■□□□□ 0.23
ATPAF2-204ENST00000467560 NAP1L4Q99733 375 aaKnown RBP16.51■□□□□ 0.23
ATPAF2-204ENST00000467560 EIF2AK1Q9BQI3 630 aaKnown RBP16.51■□□□□ 0.23
ATPAF2-204ENST00000467560 TMEM60Q9H2L4 133 aa16.51■□□□□ 0.23
ATPAF2-204ENST00000467560 ZSWIM4Q9H7M6 989 aa16.51■□□□□ 0.23
ATPAF2-204ENST00000467560 FAM105AQ9NUU6 356 aa16.51■□□□□ 0.23
ATPAF2-204ENST00000467560 SPG21Q9NZD8 308 aa16.51■□□□□ 0.23
ATPAF2-204ENST00000467560 USP15Q9Y4E8 981 aaPredicted RBP16.51■□□□□ 0.23
ATPAF2-204ENST00000467560 DCXO43602 365 aa16.5■□□□□ 0.23
ATPAF2-204ENST00000467560 OFD1O75665 1012 aa16.5■□□□□ 0.23
ATPAF2-204ENST00000467560 RFC5P40937 340 aa16.5■□□□□ 0.23
ATPAF2-204ENST00000467560 BCAR1P56945 870 aa16.5■□□□□ 0.23
ATPAF2-204ENST00000467560 XKR9Q5GH70 373 aa16.5■□□□□ 0.23
ATPAF2-204ENST00000467560 LLGL2Q6P1M3 1020 aa16.5■□□□□ 0.23
ATPAF2-204ENST00000467560 ENTPD7Q9NQZ7 604 aa16.5■□□□□ 0.23
ATPAF2-204ENST00000467560 AGPAT5Q9NUQ2 364 aa16.5■□□□□ 0.23
ATPAF2-204ENST00000467560 TBC1D13Q9NVG8 400 aa16.5■□□□□ 0.23
ATPAF2-204ENST00000467560 MUTYHQ9UIF7 546 aa16.5■□□□□ 0.23
ATPAF2-204ENST00000467560 CDH22Q9UJ99 828 aa16.5■□□□□ 0.23
ATPAF2-204ENST00000467560 DKC1O60832 514 aaKnown RBP eCLIP16.49■□□□□ 0.23
ATPAF2-204ENST00000467560 ZNF623O75123 536 aa16.49■□□□□ 0.23
ATPAF2-204ENST00000467560 TXKP42681 527 aa16.49■□□□□ 0.23
ATPAF2-204ENST00000467560 CALCRLQ16602 461 aa16.49■□□□□ 0.23
ATPAF2-204ENST00000467560 SYCE2Q6PIF2 218 aa16.49■□□□□ 0.23
ATPAF2-204ENST00000467560 AGMOQ6ZNB7 445 aa16.49■□□□□ 0.23
ATPAF2-204ENST00000467560 FERMT3Q86UX7 667 aa16.49■□□□□ 0.23
ATPAF2-204ENST00000467560 RNF135Q8IUD6 432 aa16.49■□□□□ 0.23
ATPAF2-204ENST00000467560 RNF149Q8NC42 400 aa16.49■□□□□ 0.23
ATPAF2-204ENST00000467560 ASAP3Q8TDY4 903 aa16.49■□□□□ 0.23
ATPAF2-204ENST00000467560 PSPC1Q8WXF1 523 aaKnown RBP16.49■□□□□ 0.23
ATPAF2-204ENST00000467560 KIF2CQ99661 725 aa16.49■□□□□ 0.23
ATPAF2-204ENST00000467560 JPH2Q9BR39 696 aaPredicted RBP16.49■□□□□ 0.23
ATPAF2-204ENST00000467560 APOL5Q9BWW9 433 aa16.49■□□□□ 0.23
ATPAF2-204ENST00000467560 VN1R3Q9BXE9 311 aa16.49■□□□□ 0.23
ATPAF2-204ENST00000467560 INO80BQ9C086 356 aaPredicted RBP16.49■□□□□ 0.23
ATPAF2-204ENST00000467560 S1PR5Q9H228 398 aa16.49■□□□□ 0.23
ATPAF2-204ENST00000467560 NRDE2Q9H7Z3 1164 aa16.49■□□□□ 0.23
ATPAF2-204ENST00000467560 TTC12Q9H892 705 aaPredicted RBP16.49■□□□□ 0.23
ATPAF2-204ENST00000467560 BRMS1Q9HCU9 246 aa16.49■□□□□ 0.23
ATPAF2-204ENST00000467560 DNAJB4Q9UDY4 337 aa16.49■□□□□ 0.23
ATPAF2-204ENST00000467560 PUF60Q9UHX1 559 aaKnown RBP16.49■□□□□ 0.23
ATPAF2-204ENST00000467560 PCDHA12Q9UN75 941 aa16.49■□□□□ 0.23
ATPAF2-204ENST00000467560 INPP5FQ9Y2H2 1132 aa16.49■□□□□ 0.23
ATPAF2-204ENST00000467560 PCDHB2Q9Y5E7 798 aa16.49■□□□□ 0.23
ATPAF2-204ENST00000467560 C2orf71A6NGG8 1288 aa16.48■□□□□ 0.23
ATPAF2-204ENST00000467560 NEMFO60524 1076 aa16.48■□□□□ 0.23
ATPAF2-204ENST00000467560 ZC3H11AO75152 810 aaKnown RBP eCLIP16.48■□□□□ 0.23
ATPAF2-204ENST00000467560 BAG4O95429 457 aaKnown RBP16.48■□□□□ 0.23
ATPAF2-204ENST00000467560 ALADP13716 330 aa16.48■□□□□ 0.23
ATPAF2-204ENST00000467560 ATP2B1P20020 1258 aa16.48■□□□□ 0.23
ATPAF2-204ENST00000467560 PPM1AP35813 382 aa16.48■□□□□ 0.23
ATPAF2-204ENST00000467560 PDE12Q6L8Q7 609 aaKnown RBP16.48■□□□□ 0.23
ATPAF2-204ENST00000467560 TMEM184AQ6ZMB5 413 aa16.48■□□□□ 0.23
ATPAF2-204ENST00000467560 TMC7Q7Z402 723 aa16.48■□□□□ 0.23
ATPAF2-204ENST00000467560 ZNF280BQ86YH2 543 aa16.48■□□□□ 0.23
ATPAF2-204ENST00000467560 CCDC83Q8IWF9 413 aa16.48■□□□□ 0.23
ATPAF2-204ENST00000467560 MRPL43Q8N983 215 aaKnown RBP16.48■□□□□ 0.23
ATPAF2-204ENST00000467560 AUTS2Q8WXX7 1259 aa16.48■□□□□ 0.23
ATPAF2-204ENST00000467560 SUSD6Q92537 303 aa16.48■□□□□ 0.23
ATPAF2-204ENST00000467560 CDCA3Q99618 268 aaPredicted RBP16.48■□□□□ 0.23
ATPAF2-204ENST00000467560 MRPL9Q9BYD2 267 aaKnown RBP16.48■□□□□ 0.23
ATPAF2-204ENST00000467560 NGRNQ9NPE2 291 aaKnown RBP16.48■□□□□ 0.23
ATPAF2-204ENST00000467560 PPME1Q9Y570 386 aa16.48■□□□□ 0.23
ATPAF2-204ENST00000467560 POTEMA6NI47 508 aa16.47■□□□□ 0.23
ATPAF2-204ENST00000467560 LOC730098B7Z3J9 87 aa16.47■□□□□ 0.23
ATPAF2-204ENST00000467560 LYPLA2O95372 231 aa16.47■□□□□ 0.23
ATPAF2-204ENST00000467560 GALTP07902 379 aa16.47■□□□□ 0.23
ATPAF2-204ENST00000467560 SPATA31C1P0DKV0 1188 aa16.47■□□□□ 0.23
ATPAF2-204ENST00000467560 TECP42680 631 aa16.47■□□□□ 0.23
ATPAF2-204ENST00000467560 KRT17Q04695 432 aa16.47■□□□□ 0.23
ATPAF2-204ENST00000467560 NOMO2Q5JPE7 1267 aa16.47■□□□□ 0.23
ATPAF2-204ENST00000467560 ANKRD54Q6NXT1 300 aa16.47■□□□□ 0.23
ATPAF2-204ENST00000467560 GLB1LQ6UWU2 654 aa16.47■□□□□ 0.23
ATPAF2-204ENST00000467560 OTUD6AQ7L8S5 288 aa16.47■□□□□ 0.23
ATPAF2-204ENST00000467560 SRGAP1Q7Z6B7 1085 aa16.47■□□□□ 0.23
ATPAF2-204ENST00000467560 MRPL10Q7Z7H8 261 aaKnown RBP16.47■□□□□ 0.23
ATPAF2-204ENST00000467560 FEZF2Q8TBJ5 459 aa16.47■□□□□ 0.23
ATPAF2-204ENST00000467560 PIGOQ8TEQ8 1089 aa16.47■□□□□ 0.23
ATPAF2-204ENST00000467560 MTRQ99707 1265 aa16.47■□□□□ 0.23
ATPAF2-204ENST00000467560 RNF39Q9H2S5 420 aa16.47■□□□□ 0.23
ATPAF2-204ENST00000467560 WDFY4Q6ZS81 3184 aa16.47■□□□□ 0.23
ATPAF2-204ENST00000467560 TECTAO75443 2155 aa16.46■□□□□ 0.23
ATPAF2-204ENST00000467560 PRR33A8MZF0 331 aa16.46■□□□□ 0.23
ATPAF2-204ENST00000467560 TSPAN1O60635 241 aa16.46■□□□□ 0.23
ATPAF2-204ENST00000467560 CLASP2O75122 1294 aaKnown RBP16.46■□□□□ 0.23
ATPAF2-204ENST00000467560 DDHD2O94830 711 aa16.46■□□□□ 0.23
ATPAF2-204ENST00000467560 ARL2P36404 184 aa16.46■□□□□ 0.23
ATPAF2-204ENST00000467560 SLC11A1P49279 550 aa16.46■□□□□ 0.23
ATPAF2-204ENST00000467560 ALDH7A1P49419 539 aaKnown RBP16.46■□□□□ 0.23
ATPAF2-204ENST00000467560 RARRES1P49788 294 aa16.46■□□□□ 0.23
ATPAF2-204ENST00000467560 CAPSQ13938 189 aa16.46■□□□□ 0.23
ATPAF2-204ENST00000467560 AMHR2Q16671 573 aa16.46■□□□□ 0.23
ATPAF2-204ENST00000467560 HERC4Q5GLZ8 1057 aaPredicted RBP16.46■□□□□ 0.23
ATPAF2-204ENST00000467560 SMG8Q8ND04 991 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 190.3 ms