RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 INSL6Q9Y581 213 aa7.07□□□□□ -1.28
NCL-208ENST00000466274 SNX11Q9Y5W9 270 aa7.07□□□□□ -1.28
NCL-208ENST00000466274 EPG5Q9HCE0 2579 aa7.07□□□□□ -1.28
NCL-208ENST00000466274 ZNF318Q5VUA4 2279 aa7.06□□□□□ -1.28
NCL-208ENST00000466274 A0A1B0GUL6 1792 aa7.06□□□□□ -1.28
NCL-208ENST00000466274 ABHD14A-ACY1A0A1B0GW23 586 aa7.06□□□□□ -1.28
NCL-208ENST00000466274 WDR46O15213 610 aaKnown RBP7.06□□□□□ -1.28
NCL-208ENST00000466274 VAMP4O75379 141 aa7.06□□□□□ -1.28
NCL-208ENST00000466274 CYP2C9P11712 490 aa7.06□□□□□ -1.28
NCL-208ENST00000466274 SDHBP21912 280 aa7.06□□□□□ -1.28
NCL-208ENST00000466274 RING1Q06587 406 aa7.06□□□□□ -1.28
NCL-208ENST00000466274 GORABQ5T7V8 394 aa7.06□□□□□ -1.28
NCL-208ENST00000466274 SLC23A3Q6PIS1 610 aa7.06□□□□□ -1.28
NCL-208ENST00000466274 FRMD5Q7Z6J6 570 aa7.06□□□□□ -1.28
NCL-208ENST00000466274 RPAINQ86UA6 219 aa7.06□□□□□ -1.28
NCL-208ENST00000466274 SPATA5Q8NB90 893 aa7.06□□□□□ -1.28
NCL-208ENST00000466274 KCNG4Q8TDN1 519 aa7.06□□□□□ -1.28
NCL-208ENST00000466274 ZNF384Q8TF68 577 aa7.06□□□□□ -1.28
NCL-208ENST00000466274 TMEM40Q8WWA1 233 aa7.06□□□□□ -1.28
NCL-208ENST00000466274 OSBPL7Q9BZF2 842 aa7.06□□□□□ -1.28
NCL-208ENST00000466274 SEMA4AQ9H3S1 761 aa7.06□□□□□ -1.28
NCL-208ENST00000466274 TRMT13Q9NUP7 481 aaKnown RBP7.06□□□□□ -1.28
NCL-208ENST00000466274 GTF2IRD1Q9UHL9 959 aa7.06□□□□□ -1.28
NCL-208ENST00000466274 CD207Q9UJ71 328 aa7.06□□□□□ -1.28
NCL-208ENST00000466274 GNEQ9Y223 722 aaKnown RBP7.06□□□□□ -1.28
NCL-208ENST00000466274 ZFHX4Q86UP3 3567 aa7.05□□□□□ -1.28
NCL-208ENST00000466274 GRIN2DO15399 1336 aa7.05□□□□□ -1.28
NCL-208ENST00000466274 H3BNC9 293 aa7.05□□□□□ -1.28
NCL-208ENST00000466274 VWA5AO00534 786 aa7.05□□□□□ -1.28
NCL-208ENST00000466274 MPHOSPH10O00566 681 aaKnown RBP7.05□□□□□ -1.28
NCL-208ENST00000466274 CTAGE5O15320 804 aa7.05□□□□□ -1.28
NCL-208ENST00000466274 ADORA1P30542 326 aa7.05□□□□□ -1.28
NCL-208ENST00000466274 GSTT1P30711 240 aa7.05□□□□□ -1.28
NCL-208ENST00000466274 RFX5P48382 616 aaPredicted RBP7.05□□□□□ -1.28
NCL-208ENST00000466274 PSMC6P62333 389 aa7.05□□□□□ -1.28
NCL-208ENST00000466274 IKZF1Q13422 519 aa7.05□□□□□ -1.28
NCL-208ENST00000466274 GPM6BQ13491 265 aa7.05□□□□□ -1.28
NCL-208ENST00000466274 CLUL1Q15846 466 aa7.05□□□□□ -1.28
NCL-208ENST00000466274 NKPD1Q17RQ9 610 aa7.05□□□□□ -1.28
NCL-208ENST00000466274 BRDTQ58F21 947 aaPredicted RBP7.05□□□□□ -1.28
NCL-208ENST00000466274 ZBTB37Q5TC79 503 aa7.05□□□□□ -1.28
NCL-208ENST00000466274 CNKSR3Q6P9H4 555 aa7.05□□□□□ -1.28
NCL-208ENST00000466274 ARMCX2Q7L311 632 aa7.05□□□□□ -1.28
NCL-208ENST00000466274 SPACA3Q8IXA5 215 aa7.05□□□□□ -1.28
NCL-208ENST00000466274 ANKRD35Q8N283 1001 aa7.05□□□□□ -1.28
NCL-208ENST00000466274 PPP2R3CQ969Q6 453 aa7.05□□□□□ -1.28
NCL-208ENST00000466274 RIPOR3Q96MK2 946 aa7.05□□□□□ -1.28
NCL-208ENST00000466274 TEX13BQ9BXU2 312 aa7.05□□□□□ -1.28
NCL-208ENST00000466274 CEP44Q9C0F1 390 aa7.05□□□□□ -1.28
NCL-208ENST00000466274 HMG20BQ9P0W2 317 aa7.05□□□□□ -1.28
NCL-208ENST00000466274 FBXO40Q9UH90 709 aa7.05□□□□□ -1.28
NCL-208ENST00000466274 PCDHA4Q9UN74 947 aa7.05□□□□□ -1.28
NCL-208ENST00000466274 ADAMTS5Q9UNA0 930 aa7.05□□□□□ -1.28
NCL-208ENST00000466274 HDAC5Q9UQL6 1122 aa7.05□□□□□ -1.28
NCL-208ENST00000466274 CTDP1Q9Y5B0 961 aaPredicted RBP7.05□□□□□ -1.28
NCL-208ENST00000466274 IL16Q14005 1332 aa7.04□□□□□ -1.28
NCL-208ENST00000466274 DNAJC25-GNG10A0A024R161 153 aa7.04□□□□□ -1.28
NCL-208ENST00000466274 A0A1W2PRG0 241 aa7.04□□□□□ -1.28
NCL-208ENST00000466274 ASB14A6NK59 587 aa7.04□□□□□ -1.28
NCL-208ENST00000466274 LOC730098B7Z3J9 87 aa7.04□□□□□ -1.28
NCL-208ENST00000466274 EOMESO95936 686 aa7.04□□□□□ -1.28
NCL-208ENST00000466274 UQCRFS1P1P0C7P4 283 aa7.04□□□□□ -1.28
NCL-208ENST00000466274 ICAM3P32942 547 aa7.04□□□□□ -1.28
NCL-208ENST00000466274 MAPK8P45983 427 aa7.04□□□□□ -1.28
NCL-208ENST00000466274 TIMM10P62072 90 aa7.04□□□□□ -1.28
NCL-208ENST00000466274 CBX2Q14781 532 aaPredicted RBP7.04□□□□□ -1.28
NCL-208ENST00000466274 SEPT2Q15019 361 aa7.04□□□□□ -1.28
NCL-208ENST00000466274 EPC2Q52LR7 807 aa7.04□□□□□ -1.28
NCL-208ENST00000466274 FAM47CQ5HY64 1035 aa7.04□□□□□ -1.28
NCL-208ENST00000466274 IQSEC1Q6DN90 963 aa7.04□□□□□ -1.28
NCL-208ENST00000466274 LLGL2Q6P1M3 1020 aa7.04□□□□□ -1.28
NCL-208ENST00000466274 TMEM179Q6ZVK1 233 aa7.04□□□□□ -1.28
NCL-208ENST00000466274 SPICE1Q8N0Z3 855 aa7.04□□□□□ -1.28
NCL-208ENST00000466274 CAGE1Q8TC20 777 aa7.04□□□□□ -1.28
NCL-208ENST00000466274 AFAP1L1Q8TED9 768 aa7.04□□□□□ -1.28
NCL-208ENST00000466274 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.04□□□□□ -1.28
NCL-208ENST00000466274 ASB11Q8WXH4 323 aa7.04□□□□□ -1.28
NCL-208ENST00000466274 CHAMP1Q96JM3 812 aa7.04□□□□□ -1.28
NCL-208ENST00000466274 C17orf80Q9BSJ5 609 aa7.04□□□□□ -1.28
NCL-208ENST00000466274 VCPKMTQ9H867 229 aa7.04□□□□□ -1.28
NCL-208ENST00000466274 DLL3Q9NYJ7 618 aa7.04□□□□□ -1.28
NCL-208ENST00000466274 SAMM50Q9Y512 469 aa7.04□□□□□ -1.28
NCL-208ENST00000466274 FANCGO15287 622 aa7.03□□□□□ -1.28
NCL-208ENST00000466274 ADCY6O43306 1168 aa7.03□□□□□ -1.28
NCL-208ENST00000466274 LMNAP02545 664 aaKnown RBP7.03□□□□□ -1.28
NCL-208ENST00000466274 AMHP03971 560 aa7.03□□□□□ -1.28
NCL-208ENST00000466274 GUCY1A2P33402 732 aa7.03□□□□□ -1.28
NCL-208ENST00000466274 LTBRP36941 435 aa7.03□□□□□ -1.28
NCL-208ENST00000466274 NDUFV1P49821 464 aa7.03□□□□□ -1.28
NCL-208ENST00000466274 CPT1AP50416 773 aa7.03□□□□□ -1.28
NCL-208ENST00000466274 DEFB103AP81534 67 aa7.03□□□□□ -1.28
NCL-208ENST00000466274 PTPN11Q06124 597 aaPredicted RBP7.03□□□□□ -1.28
NCL-208ENST00000466274 PTPN21Q16825 1174 aa7.03□□□□□ -1.28
NCL-208ENST00000466274 SNRNP48Q6IEG0 339 aaKnown RBP7.03□□□□□ -1.28
NCL-208ENST00000466274 NFRKBQ6P4R8 1299 aa7.03□□□□□ -1.28
NCL-208ENST00000466274 CCDC144CPQ8IYA2 1237 aa7.03□□□□□ -1.28
NCL-208ENST00000466274 KIAA2013Q8IYS2 634 aa7.03□□□□□ -1.28
NCL-208ENST00000466274 NEUROD6Q96NK8 337 aa7.03□□□□□ -1.28
NCL-208ENST00000466274 PHF7Q9BWX1 381 aaPredicted RBP7.03□□□□□ -1.28
NCL-208ENST00000466274 KRTAP4-7Q9BYR0 210 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms