RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 CHST12Q9NRB3 414 aa14.3□□□□□ -0.12
COL5A1-206ENST00000465877 FBXO2Q9UK22 296 aaPredicted RBP14.3□□□□□ -0.12
COL5A1-206ENST00000465877 MRPL42Q9Y6G3 142 aaKnown RBP14.3□□□□□ -0.12
COL5A1-206ENST00000465877 PDCD11Q14690 1871 aaKnown RBP14.29□□□□□ -0.12
COL5A1-206ENST00000465877 A0A0U1RQF3 1178 aa14.29□□□□□ -0.12
COL5A1-206ENST00000465877 INO80B-WBP1J3KQ70 363 aa14.29□□□□□ -0.12
COL5A1-206ENST00000465877 HOXA2O43364 376 aa14.29□□□□□ -0.12
COL5A1-206ENST00000465877 SLC26A4O43511 780 aa14.29□□□□□ -0.12
COL5A1-206ENST00000465877 TSPAN1O60635 241 aa14.29□□□□□ -0.12
COL5A1-206ENST00000465877 LPXNO60711 386 aa14.29□□□□□ -0.12
COL5A1-206ENST00000465877 F13A1P00488 732 aa14.29□□□□□ -0.12
COL5A1-206ENST00000465877 ZSCAN22P10073 491 aaPredicted RBP14.29□□□□□ -0.12
COL5A1-206ENST00000465877 FGFR1P11362 822 aa14.29□□□□□ -0.12
COL5A1-206ENST00000465877 PDIA4P13667 645 aaKnown RBP14.29□□□□□ -0.12
COL5A1-206ENST00000465877 MARCKSP29966 332 aaPredicted RBP14.29□□□□□ -0.12
COL5A1-206ENST00000465877 UBA7P41226 1012 aa14.29□□□□□ -0.12
COL5A1-206ENST00000465877 RAB27AP51159 221 aa14.29□□□□□ -0.12
COL5A1-206ENST00000465877 FAM189BP81408 668 aa14.29□□□□□ -0.12
COL5A1-206ENST00000465877 POU5F1BQ06416 359 aa14.29□□□□□ -0.12
COL5A1-206ENST00000465877 PKP1Q13835 747 aa14.29□□□□□ -0.12
COL5A1-206ENST00000465877 PCBP1Q15365 356 aaKnown RBP eCLIP14.29□□□□□ -0.12
COL5A1-206ENST00000465877 FOXD4L5Q5VV16 416 aaPredicted RBP14.29□□□□□ -0.12
COL5A1-206ENST00000465877 TMEM192Q8IY95 271 aa14.29□□□□□ -0.12
COL5A1-206ENST00000465877 KCTD17Q8N5Z5 321 aa14.29□□□□□ -0.12
COL5A1-206ENST00000465877 RNF169Q8NCN4 708 aa14.29□□□□□ -0.12
COL5A1-206ENST00000465877 RASSF8Q8NHQ8 419 aa14.29□□□□□ -0.12
COL5A1-206ENST00000465877 FOXD4L4Q8WXT5 416 aaPredicted RBP14.29□□□□□ -0.12
COL5A1-206ENST00000465877 KIFAP3Q92845 792 aa14.29□□□□□ -0.12
COL5A1-206ENST00000465877 CALML4Q96GE6 196 aa14.29□□□□□ -0.12
COL5A1-206ENST00000465877 PLIN2Q99541 437 aa14.29□□□□□ -0.12
COL5A1-206ENST00000465877 TRAIPQ9BWF2 469 aa14.29□□□□□ -0.12
COL5A1-206ENST00000465877 FAM105AQ9NUU6 356 aa14.29□□□□□ -0.12
COL5A1-206ENST00000465877 RNF19AQ9NV58 838 aa14.29□□□□□ -0.12
COL5A1-206ENST00000465877 RWDD3Q9Y3V2 267 aa14.29□□□□□ -0.12
COL5A1-206ENST00000465877 MORC2Q9Y6X9 1032 aaPredicted RBP14.29□□□□□ -0.12
COL5A1-206ENST00000465877 TBKBP1A7MCY6 615 aa14.28□□□□□ -0.12
COL5A1-206ENST00000465877 CITO14578 2027 aa14.28□□□□□ -0.12
COL5A1-206ENST00000465877 GTPBP6O43824 516 aaPredicted RBP14.28□□□□□ -0.12
COL5A1-206ENST00000465877 NAMPTP43490 491 aa14.28□□□□□ -0.12
COL5A1-206ENST00000465877 NASPP49321 788 aaPredicted RBP14.28□□□□□ -0.12
COL5A1-206ENST00000465877 KARSQ15046 597 aaKnown RBP14.28□□□□□ -0.12
COL5A1-206ENST00000465877 PPP2R5AQ15172 486 aa14.28□□□□□ -0.12
COL5A1-206ENST00000465877 AMHR2Q16671 573 aa14.28□□□□□ -0.12
COL5A1-206ENST00000465877 CLLU1OSQ5K130 101 aa14.28□□□□□ -0.12
COL5A1-206ENST00000465877 ZNF598Q86UK7 904 aaKnown RBP14.28□□□□□ -0.12
COL5A1-206ENST00000465877 ZBTB8OSQ8IWT0 167 aa14.28□□□□□ -0.12
COL5A1-206ENST00000465877 ABI1Q8IZP0 508 aa14.28□□□□□ -0.12
COL5A1-206ENST00000465877 LRRC43Q8N309 656 aa14.28□□□□□ -0.12
COL5A1-206ENST00000465877 MICALL1Q8N3F8 863 aa14.28□□□□□ -0.12
COL5A1-206ENST00000465877 LRRC15Q8TF66 581 aa14.28□□□□□ -0.12
COL5A1-206ENST00000465877 CSRNP2Q9H175 543 aa14.28□□□□□ -0.12
COL5A1-206ENST00000465877 C2orf40Q9H1Z8 148 aa14.28□□□□□ -0.12
COL5A1-206ENST00000465877 HCSTQ9UBK5 93 aa14.28□□□□□ -0.12
COL5A1-206ENST00000465877 MTCH2Q9Y6C9 303 aa14.28□□□□□ -0.12
COL5A1-206ENST00000465877 CNTNAP2Q9UHC6 1331 aa14.27□□□□□ -0.12
COL5A1-206ENST00000465877 C5orf67F2Z3F1 127 aa14.27□□□□□ -0.13
COL5A1-206ENST00000465877 SSBP05455 408 aaKnown RBP eCLIP14.27□□□□□ -0.13
COL5A1-206ENST00000465877 PLCG1P19174 1290 aa14.27□□□□□ -0.13
COL5A1-206ENST00000465877 POU3F3P20264 500 aaPredicted RBP14.27□□□□□ -0.13
COL5A1-206ENST00000465877 HOXA11P31270 313 aaPredicted RBP14.27□□□□□ -0.13
COL5A1-206ENST00000465877 SLC12A3P55017 1021 aa14.27□□□□□ -0.13
COL5A1-206ENST00000465877 STK38Q15208 465 aa14.27□□□□□ -0.13
COL5A1-206ENST00000465877 RINT1Q6NUQ1 792 aa14.27□□□□□ -0.13
COL5A1-206ENST00000465877 NOTUMQ6P988 496 aa14.27□□□□□ -0.13
COL5A1-206ENST00000465877 DAW1Q8N136 415 aa14.27□□□□□ -0.13
COL5A1-206ENST00000465877 SYT2Q8N9I0 419 aaPredicted RBP14.27□□□□□ -0.13
COL5A1-206ENST00000465877 CCDC51Q96ER9 411 aa14.27□□□□□ -0.13
COL5A1-206ENST00000465877 CPB2Q96IY4 423 aa14.27□□□□□ -0.13
COL5A1-206ENST00000465877 IFT74Q96LB3 600 aa14.27□□□□□ -0.13
COL5A1-206ENST00000465877 PRIMPOLQ96LW4 560 aa14.27□□□□□ -0.13
COL5A1-206ENST00000465877 DRC1Q96MC2 740 aa14.27□□□□□ -0.13
COL5A1-206ENST00000465877 C11orf84Q9BUA3 381 aaPredicted RBP14.27□□□□□ -0.13
COL5A1-206ENST00000465877 KIFC3Q9BVG8 833 aa14.27□□□□□ -0.13
COL5A1-206ENST00000465877 TMEM117Q9H0C3 514 aa14.27□□□□□ -0.13
COL5A1-206ENST00000465877 SRPRBQ9Y5M8 271 aaKnown RBP14.27□□□□□ -0.13
COL5A1-206ENST00000465877 PHLPP2Q6ZVD8 1323 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 TRIP11Q15643 1979 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 MEIS3P2A8K0S8 358 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 H3BNC9 293 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 B4GALT5O43286 388 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 HIP1RO75146 1068 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 EOMESO95936 686 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 PLA2G4BP0C869 781 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 SKIP12755 728 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 ARF4P18085 180 aaPredicted RBP14.26□□□□□ -0.13
COL5A1-206ENST00000465877 GUCY2CP25092 1073 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 AXLP30530 894 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 MAPK7Q13164 816 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 GPM6BQ13491 265 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 SLC39A14Q15043 492 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 SPECC1Q5M775 1068 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 UBXN11Q5T124 520 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 PPP4R3CPQ6ZMV5 832 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 C1orf186Q6ZWK4 172 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 DEPTORQ8TB45 409 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 HELQQ8TDG4 1101 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 SYMPKQ92797 1274 aaKnown RBP14.26□□□□□ -0.13
COL5A1-206ENST00000465877 LPPQ93052 612 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 EPSTI1Q96J88 318 aa14.26□□□□□ -0.13
COL5A1-206ENST00000465877 ZNF396Q96N95 335 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms