RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 KIAA1024Q9UPX6 916 aa13.55□□□□□ -0.24
XRN1-204ENST00000465074 INPP5FQ9Y2H2 1132 aa13.55□□□□□ -0.24
XRN1-204ENST00000465074 C5orf67F2Z3F1 127 aa13.54□□□□□ -0.24
XRN1-204ENST00000465074 EOMESO95936 686 aa13.54□□□□□ -0.24
XRN1-204ENST00000465074 ITGB1P05556 798 aa13.54□□□□□ -0.24
XRN1-204ENST00000465074 KCNA5P22460 613 aa13.54□□□□□ -0.24
XRN1-204ENST00000465074 CDC25AP30304 524 aa13.54□□□□□ -0.24
XRN1-204ENST00000465074 PBX3P40426 434 aa13.54□□□□□ -0.24
XRN1-204ENST00000465074 FXR2P51116 673 aaKnown RBP eCLIP13.54□□□□□ -0.24
XRN1-204ENST00000465074 NCBP1Q09161 790 aaKnown RBP13.54□□□□□ -0.24
XRN1-204ENST00000465074 CAPSQ13938 189 aa13.54□□□□□ -0.24
XRN1-204ENST00000465074 ECM1Q16610 540 aa13.54□□□□□ -0.24
XRN1-204ENST00000465074 TMEM132AQ24JP5 1023 aa13.54□□□□□ -0.24
XRN1-204ENST00000465074 TIGD5Q53EQ6 642 aa13.54□□□□□ -0.24
XRN1-204ENST00000465074 RILPL1Q5EBL4 403 aa13.54□□□□□ -0.24
XRN1-204ENST00000465074 CLLU1OSQ5K130 101 aa13.54□□□□□ -0.24
XRN1-204ENST00000465074 PADI6Q6TGC4 694 aa13.54□□□□□ -0.24
XRN1-204ENST00000465074 COLGALT1Q8NBJ5 622 aa13.54□□□□□ -0.24
XRN1-204ENST00000465074 POF1BQ8WVV4 589 aa13.54□□□□□ -0.24
XRN1-204ENST00000465074 CPB2Q96IY4 423 aa13.54□□□□□ -0.24
XRN1-204ENST00000465074 GBP3Q9H0R5 595 aa13.54□□□□□ -0.24
XRN1-204ENST00000465074 NSUN3Q9H649 340 aaKnown RBP13.54□□□□□ -0.24
XRN1-204ENST00000465074 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.54□□□□□ -0.24
XRN1-204ENST00000465074 AGPAT5Q9NUQ2 364 aa13.54□□□□□ -0.24
XRN1-204ENST00000465074 FAM105AQ9NUU6 356 aa13.54□□□□□ -0.24
XRN1-204ENST00000465074 DDX19AQ9NUU7 478 aaKnown RBP13.54□□□□□ -0.24
XRN1-204ENST00000465074 DBR1Q9UK59 544 aaKnown RBP13.54□□□□□ -0.24
XRN1-204ENST00000465074 COG5Q9UP83 839 aa13.54□□□□□ -0.24
XRN1-204ENST00000465074 ATG2AQ2TAZ0 1938 aa13.54□□□□□ -0.24
XRN1-204ENST00000465074 VWA3AA6NCI4 1184 aa13.53□□□□□ -0.24
XRN1-204ENST00000465074 SKIP12755 728 aa13.53□□□□□ -0.24
XRN1-204ENST00000465074 GLRA2P23416 452 aa13.53□□□□□ -0.24
XRN1-204ENST00000465074 DNAJB1P25685 340 aa13.53□□□□□ -0.24
XRN1-204ENST00000465074 CA8P35219 290 aa13.53□□□□□ -0.24
XRN1-204ENST00000465074 ARL2P36404 184 aa13.53□□□□□ -0.24
XRN1-204ENST00000465074 RNASELQ05823 741 aaKnown RBP13.53□□□□□ -0.24
XRN1-204ENST00000465074 PDIA5Q14554 519 aa13.53□□□□□ -0.24
XRN1-204ENST00000465074 IL17AQ16552 155 aa13.53□□□□□ -0.24
XRN1-204ENST00000465074 KRT79Q5XKE5 535 aa13.53□□□□□ -0.24
XRN1-204ENST00000465074 LRRC55Q6ZSA7 311 aa13.53□□□□□ -0.24
XRN1-204ENST00000465074 RBM23Q86U06 439 aaKnown RBP13.53□□□□□ -0.24
XRN1-204ENST00000465074 LRRC43Q8N309 656 aa13.53□□□□□ -0.24
XRN1-204ENST00000465074 MCPH1Q8NEM0 835 aa13.53□□□□□ -0.24
XRN1-204ENST00000465074 SPPL3Q8TCT6 385 aa13.53□□□□□ -0.24
XRN1-204ENST00000465074 P2RX5Q93086 422 aa13.53□□□□□ -0.24
XRN1-204ENST00000465074 PLIN2Q99541 437 aa13.53□□□□□ -0.24
XRN1-204ENST00000465074 APOL6Q9BWW8 343 aa13.53□□□□□ -0.24
XRN1-204ENST00000465074 LMAN2LQ9H0V9 348 aa13.53□□□□□ -0.24
XRN1-204ENST00000465074 BHMT2Q9H2M3 363 aa13.53□□□□□ -0.24
XRN1-204ENST00000465074 UBE2ZQ9H832 354 aaPredicted RBP13.53□□□□□ -0.24
XRN1-204ENST00000465074 RNF19AQ9NV58 838 aa13.53□□□□□ -0.24
XRN1-204ENST00000465074 CLDND1Q9NY35 253 aa13.53□□□□□ -0.24
XRN1-204ENST00000465074 PCDHB2Q9Y5E7 798 aa13.53□□□□□ -0.24
XRN1-204ENST00000465074 MEIS3P2A8K0S8 358 aa13.52□□□□□ -0.25
XRN1-204ENST00000465074 NT5C1B-RDH14C9J2C7 533 aa13.52□□□□□ -0.25
XRN1-204ENST00000465074 LAD1O00515 517 aa13.52□□□□□ -0.25
XRN1-204ENST00000465074 FGF18O76093 207 aa13.52□□□□□ -0.25
XRN1-204ENST00000465074 SSBP05455 408 aaKnown RBP eCLIP13.52□□□□□ -0.25
XRN1-204ENST00000465074 ATF7P17544 494 aaPredicted RBP13.52□□□□□ -0.25
XRN1-204ENST00000465074 LAG3P18627 525 aa13.52□□□□□ -0.25
XRN1-204ENST00000465074 PTENP60484 403 aa13.52□□□□□ -0.25
XRN1-204ENST00000465074 NAALADL2Q58DX5 795 aa13.52□□□□□ -0.25
XRN1-204ENST00000465074 KCNT2Q6UVM3 1135 aa13.52□□□□□ -0.25
XRN1-204ENST00000465074 GLB1LQ6UWU2 654 aa13.52□□□□□ -0.25
XRN1-204ENST00000465074 ZNF598Q86UK7 904 aaKnown RBP13.52□□□□□ -0.25
XRN1-204ENST00000465074 CDR2LQ86X02 465 aaPredicted RBP13.52□□□□□ -0.25
XRN1-204ENST00000465074 ADAMTS19Q8TE59 1207 aa13.52□□□□□ -0.25
XRN1-204ENST00000465074 PGBD4Q96DM1 585 aa13.52□□□□□ -0.25
XRN1-204ENST00000465074 ZNF558Q96NG5 402 aa13.52□□□□□ -0.25
XRN1-204ENST00000465074 NECAB3Q96P71 396 aaPredicted RBP13.52□□□□□ -0.25
XRN1-204ENST00000465074 CWH43Q9H720 699 aa13.52□□□□□ -0.25
XRN1-204ENST00000465074 PCDHGC5Q9Y5F6 944 aa13.52□□□□□ -0.25
XRN1-204ENST00000465074 MYO7AQ13402 2215 aa13.51□□□□□ -0.25
XRN1-204ENST00000465074 E9PMD0 336 aa13.51□□□□□ -0.25
XRN1-204ENST00000465074 H3BQ06 376 aaPredicted RBP13.51□□□□□ -0.25
XRN1-204ENST00000465074 TSPAN1O60635 241 aa13.51□□□□□ -0.25
XRN1-204ENST00000465074 ZC3H11AO75152 810 aaKnown RBP eCLIP13.51□□□□□ -0.25
XRN1-204ENST00000465074 PDCP20941 246 aa13.51□□□□□ -0.25
XRN1-204ENST00000465074 GTF2F1P35269 517 aaKnown RBP eCLIP13.51□□□□□ -0.25
XRN1-204ENST00000465074 IRS1P35568 1242 aa13.51□□□□□ -0.25
XRN1-204ENST00000465074 PRPHP41219 470 aa13.51□□□□□ -0.25
XRN1-204ENST00000465074 RAB27AP51159 221 aa13.51□□□□□ -0.25
XRN1-204ENST00000465074 MBTD1Q05BQ5 628 aa13.51□□□□□ -0.25
XRN1-204ENST00000465074 CUL4AQ13619 759 aa13.51□□□□□ -0.25
XRN1-204ENST00000465074 CLUL1Q15846 466 aa13.51□□□□□ -0.25
XRN1-204ENST00000465074 ZBTB8OSQ8IWT0 167 aa13.51□□□□□ -0.25
XRN1-204ENST00000465074 IGSF22Q8N9C0 903 aa13.51□□□□□ -0.25
XRN1-204ENST00000465074 CDK5RAP3Q96JB5 506 aa13.51□□□□□ -0.25
XRN1-204ENST00000465074 EIF2AQ9BY44 585 aaKnown RBP13.51□□□□□ -0.25
XRN1-204ENST00000465074 TRIM6Q9C030 488 aaPredicted RBP13.51□□□□□ -0.25
XRN1-204ENST00000465074 DNM3Q9UQ16 869 aa13.51□□□□□ -0.25
XRN1-204ENST00000465074 STK24Q9Y6E0 443 aa13.51□□□□□ -0.25
XRN1-204ENST00000465074 XIRP2A4UGR9 3374 aa13.5□□□□□ -0.25
XRN1-204ENST00000465074 K7ELQ4 463 aaPredicted RBP13.5□□□□□ -0.25
XRN1-204ENST00000465074 B4GALT5O43286 388 aa13.5□□□□□ -0.25
XRN1-204ENST00000465074 ITGA4P13612 1032 aa13.5□□□□□ -0.25
XRN1-204ENST00000465074 CYP11B2P19099 503 aa13.5□□□□□ -0.25
XRN1-204ENST00000465074 HOXA11P31270 313 aaPredicted RBP13.5□□□□□ -0.25
XRN1-204ENST00000465074 NRIP1P48552 1158 aa13.5□□□□□ -0.25
XRN1-204ENST00000465074 ALDH7A1P49419 539 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms