RNA–Protein interactions for RNA: ENST00000463601.1

TSC2-209, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-209ENST00000463601 CYP4A11Q02928 519 aa21.54■■□□□ 1.04
TSC2-209ENST00000463601 DUSP6Q16828 381 aa21.54■■□□□ 1.04
TSC2-209ENST00000463601 NOSTRINQ8IVI9 506 aa21.54■■□□□ 1.04
TSC2-209ENST00000463601 ZNF558Q96NG5 402 aa21.54■■□□□ 1.04
TSC2-209ENST00000463601 DHX33Q9H6R0 707 aaKnown RBP21.54■■□□□ 1.04
TSC2-209ENST00000463601 CHST12Q9NRB3 414 aa21.54■■□□□ 1.04
TSC2-209ENST00000463601 PIN4Q9Y237 131 aaKnown RBP21.54■■□□□ 1.04
TSC2-209ENST00000463601 COL4A3BPQ9Y5P4 624 aa21.54■■□□□ 1.04
TSC2-209ENST00000463601 NEMFO60524 1076 aa21.53■■□□□ 1.04
TSC2-209ENST00000463601 YWHABP31946 246 aaKnown RBP21.53■■□□□ 1.04
TSC2-209ENST00000463601 COASYQ13057 564 aa21.53■■□□□ 1.04
TSC2-209ENST00000463601 TWF2Q6IBS0 349 aaKnown RBP21.53■■□□□ 1.04
TSC2-209ENST00000463601 CATSPER4Q7RTX7 472 aa21.53■■□□□ 1.04
TSC2-209ENST00000463601 C4orf19Q8IY42 314 aa21.53■■□□□ 1.04
TSC2-209ENST00000463601 SLFN12Q8IYM2 578 aa21.53■■□□□ 1.04
TSC2-209ENST00000463601 SMRP1Q8NCR6 262 aa21.53■■□□□ 1.04
TSC2-209ENST00000463601 PRPF31Q8WWY3 499 aaKnown RBP21.53■■□□□ 1.04
TSC2-209ENST00000463601 SLC7A3Q8WY07 619 aa21.53■■□□□ 1.04
TSC2-209ENST00000463601 TCF25Q9BQ70 676 aa21.53■■□□□ 1.04
TSC2-209ENST00000463601 MINDY3Q9H8M7 445 aa21.53■■□□□ 1.04
TSC2-209ENST00000463601 SMC3Q9UQE7 1217 aa21.53■■□□□ 1.04
TSC2-209ENST00000463601 LZTS1Q9Y250 596 aa21.53■■□□□ 1.04
TSC2-209ENST00000463601 NT5C1B-RDH14C9J2C7 533 aa21.52■■□□□ 1.04
TSC2-209ENST00000463601 DKC1O60832 514 aaKnown RBP eCLIP21.52■■□□□ 1.04
TSC2-209ENST00000463601 SRGAP2CP0DJJ0 459 aa21.52■■□□□ 1.04
TSC2-209ENST00000463601 POLGP54098 1239 aaPredicted RBP21.52■■□□□ 1.04
TSC2-209ENST00000463601 SLC39A11Q8N1S5 342 aa21.52■■□□□ 1.04
TSC2-209ENST00000463601 MTMR9Q96QG7 549 aa21.52■■□□□ 1.04
TSC2-209ENST00000463601 JPH2Q9BR39 696 aaPredicted RBP21.52■■□□□ 1.04
TSC2-209ENST00000463601 ENTPD7Q9NQZ7 604 aa21.52■■□□□ 1.04
TSC2-209ENST00000463601 SPG21Q9NZD8 308 aa21.52■■□□□ 1.04
TSC2-209ENST00000463601 DCXO43602 365 aa21.51■■□□□ 1.03
TSC2-209ENST00000463601 SLITRK3O94933 977 aa21.51■■□□□ 1.03
TSC2-209ENST00000463601 BAG4O95429 457 aaKnown RBP21.51■■□□□ 1.03
TSC2-209ENST00000463601 ALADP13716 330 aa21.51■■□□□ 1.03
TSC2-209ENST00000463601 LAMTOR4Q0VGL1 99 aa21.51■■□□□ 1.03
TSC2-209ENST00000463601 GNL2Q13823 731 aaKnown RBP21.51■■□□□ 1.03
TSC2-209ENST00000463601 EMC2Q15006 297 aa21.51■■□□□ 1.03
TSC2-209ENST00000463601 CALCRLQ16602 461 aa21.51■■□□□ 1.03
TSC2-209ENST00000463601 TPH2Q8IWU9 490 aa21.51■■□□□ 1.03
TSC2-209ENST00000463601 TRAIPQ9BWF2 469 aa21.51■■□□□ 1.03
TSC2-209ENST00000463601 INO80BQ9C086 356 aaPredicted RBP21.51■■□□□ 1.03
TSC2-209ENST00000463601 ZSWIM4Q9H7M6 989 aa21.51■■□□□ 1.03
TSC2-209ENST00000463601 FAM105AQ9NUU6 356 aa21.51■■□□□ 1.03
TSC2-209ENST00000463601 PUF60Q9UHX1 559 aaKnown RBP21.51■■□□□ 1.03
TSC2-209ENST00000463601 USP15Q9Y4E8 981 aaPredicted RBP21.51■■□□□ 1.03
TSC2-209ENST00000463601 ATP2B1P20020 1258 aa21.5■■□□□ 1.03
TSC2-209ENST00000463601 MCM7P33993 719 aa21.5■■□□□ 1.03
TSC2-209ENST00000463601 PPM1AP35813 382 aa21.5■■□□□ 1.03
TSC2-209ENST00000463601 RFC5P40937 340 aa21.5■■□□□ 1.03
TSC2-209ENST00000463601 TRAPPC10P48553 1259 aa21.5■■□□□ 1.03
TSC2-209ENST00000463601 BCAR1P56945 870 aa21.5■■□□□ 1.03
TSC2-209ENST00000463601 KCNC3Q14003 757 aa21.5■■□□□ 1.03
TSC2-209ENST00000463601 XKR9Q5GH70 373 aa21.5■■□□□ 1.03
TSC2-209ENST00000463601 PDE12Q6L8Q7 609 aaKnown RBP21.5■■□□□ 1.03
TSC2-209ENST00000463601 LLGL2Q6P1M3 1020 aa21.5■■□□□ 1.03
TSC2-209ENST00000463601 TMEM173Q86WV6 379 aaPredicted RBP21.5■■□□□ 1.03
TSC2-209ENST00000463601 PSPC1Q8WXF1 523 aaKnown RBP21.5■■□□□ 1.03
TSC2-209ENST00000463601 EIF2AK1Q9BQI3 630 aaKnown RBP21.5■■□□□ 1.03
TSC2-209ENST00000463601 TMEM60Q9H2L4 133 aa21.5■■□□□ 1.03
TSC2-209ENST00000463601 AGPAT5Q9NUQ2 364 aa21.5■■□□□ 1.03
TSC2-209ENST00000463601 A0A087WWV3 80 aa21.49■■□□□ 1.03
TSC2-209ENST00000463601 KRT17Q04695 432 aa21.49■■□□□ 1.03
TSC2-209ENST00000463601 ORC2Q13416 577 aaPredicted RBP21.49■■□□□ 1.03
TSC2-209ENST00000463601 TTC38Q5R3I4 469 aa21.49■■□□□ 1.03
TSC2-209ENST00000463601 TMC7Q7Z402 723 aa21.49■■□□□ 1.03
TSC2-209ENST00000463601 RNF135Q8IUD6 432 aa21.49■■□□□ 1.03
TSC2-209ENST00000463601 CDCA3Q99618 268 aaPredicted RBP21.49■■□□□ 1.03
TSC2-209ENST00000463601 MRPL9Q9BYD2 267 aaKnown RBP21.49■■□□□ 1.03
TSC2-209ENST00000463601 XPNPEP1Q9NQW7 623 aa21.49■■□□□ 1.03
TSC2-209ENST00000463601 MUTYHQ9UIF7 546 aa21.49■■□□□ 1.03
TSC2-209ENST00000463601 PCDHA12Q9UN75 941 aa21.49■■□□□ 1.03
TSC2-209ENST00000463601 INPP5FQ9Y2H2 1132 aa21.49■■□□□ 1.03
TSC2-209ENST00000463601 PPME1Q9Y570 386 aa21.49■■□□□ 1.03
TSC2-209ENST00000463601 K7ELQ4 463 aaPredicted RBP21.48■■□□□ 1.03
TSC2-209ENST00000463601 B4GALT3O60512 393 aa21.48■■□□□ 1.03
TSC2-209ENST00000463601 ZNF623O75123 536 aa21.48■■□□□ 1.03
TSC2-209ENST00000463601 OFD1O75665 1012 aa21.48■■□□□ 1.03
TSC2-209ENST00000463601 HOXA11P31270 313 aaPredicted RBP21.48■■□□□ 1.03
TSC2-209ENST00000463601 TXKP42681 527 aa21.48■■□□□ 1.03
TSC2-209ENST00000463601 TOB1P50616 345 aaPredicted RBP21.48■■□□□ 1.03
TSC2-209ENST00000463601 OTUD6AQ7L8S5 288 aa21.48■■□□□ 1.03
TSC2-209ENST00000463601 FERMT3Q86UX7 667 aa21.48■■□□□ 1.03
TSC2-209ENST00000463601 RNF149Q8NC42 400 aa21.48■■□□□ 1.03
TSC2-209ENST00000463601 SNX21Q969T3 373 aa21.48■■□□□ 1.03
TSC2-209ENST00000463601 POP1Q99575 1024 aaKnown RBP21.48■■□□□ 1.03
TSC2-209ENST00000463601 HSD17B14Q9BPX1 270 aa21.48■■□□□ 1.03
TSC2-209ENST00000463601 APOL5Q9BWW9 433 aa21.48■■□□□ 1.03
TSC2-209ENST00000463601 TTC12Q9H892 705 aaPredicted RBP21.48■■□□□ 1.03
TSC2-209ENST00000463601 NGRNQ9NPE2 291 aaKnown RBP21.48■■□□□ 1.03
TSC2-209ENST00000463601 TBC1D13Q9NVG8 400 aa21.48■■□□□ 1.03
TSC2-209ENST00000463601 NOL7Q9UMY1 257 aaKnown RBP21.48■■□□□ 1.03
TSC2-209ENST00000463601 PCDHB2Q9Y5E7 798 aa21.48■■□□□ 1.03
TSC2-209ENST00000463601 PRR33A8MZF0 331 aa21.47■■□□□ 1.03
TSC2-209ENST00000463601 H3BQV1 296 aa21.47■■□□□ 1.03
TSC2-209ENST00000463601 ZC3H11AO75152 810 aaKnown RBP eCLIP21.47■■□□□ 1.03
TSC2-209ENST00000463601 TECP42680 631 aa21.47■■□□□ 1.03
TSC2-209ENST00000463601 ALDH7A1P49419 539 aaKnown RBP21.47■■□□□ 1.03
TSC2-209ENST00000463601 AFF1P51825 1210 aaKnown RBP21.47■■□□□ 1.03
TSC2-209ENST00000463601 ZNF174Q15697 407 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms