RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 SENP6Q9GZR1 1112 aaPredicted RBP8.14□□□□□ -1.11
EPHA4-210ENST00000463446 GBP3Q9H0R5 595 aa8.14□□□□□ -1.11
EPHA4-210ENST00000463446 GZF1Q9H116 711 aaPredicted RBP8.14□□□□□ -1.11
EPHA4-210ENST00000463446 POLR3FQ9H1D9 316 aaPredicted RBP8.14□□□□□ -1.11
EPHA4-210ENST00000463446 C11orf49Q9H6J7 331 aa8.14□□□□□ -1.11
EPHA4-210ENST00000463446 SLC39A2Q9NP94 309 aa8.14□□□□□ -1.11
EPHA4-210ENST00000463446 PRKAG2Q9UGJ0 569 aa8.14□□□□□ -1.11
EPHA4-210ENST00000463446 MYH9P35579 1960 aaKnown RBP8.13□□□□□ -1.11
EPHA4-210ENST00000463446 CARNS1A5YM72 827 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 K7ENM7 598 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 ACKR2O00590 384 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 CLDN3O15551 220 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 KLRC4O43908 158 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 ZSCAN20P17040 1043 aaPredicted RBP8.13□□□□□ -1.11
EPHA4-210ENST00000463446 GARTP22102 1010 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 PRCPP42785 496 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 CDK7P50613 346 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 NLRP11P59045 1033 aaKnown RBP8.13□□□□□ -1.11
EPHA4-210ENST00000463446 PTENP60484 403 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 MYL5Q02045 173 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 RAD51AP2Q09MP3 1159 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 BMT2Q1RMZ1 405 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 SMYD5Q6GMV2 418 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 CENPPQ6IPU0 288 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 MAEAQ7L5Y9 396 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 KIAA0319LQ8IZA0 1049 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 RNF149Q8NC42 400 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 SPDYE1Q8NFV5 336 aaPredicted RBP8.13□□□□□ -1.11
EPHA4-210ENST00000463446 FAM200AQ8TCP9 573 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 LMBR1Q8WVP7 490 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 TMEM143Q96AN5 459 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 CCDC51Q96ER9 411 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 BICD1Q96G01 975 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 CEP89Q96ST8 783 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 TCHPQ9BT92 498 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 FTHL17Q9BXU8 183 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 CELF4Q9BZC1 486 aaKnown RBP8.13□□□□□ -1.11
EPHA4-210ENST00000463446 MCOLN1Q9GZU1 580 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 TYW1Q9NV66 732 aaKnown RBP8.13□□□□□ -1.11
EPHA4-210ENST00000463446 TBX20Q9UMR3 447 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 TRAF3IP3Q9Y228 551 aa8.13□□□□□ -1.11
EPHA4-210ENST00000463446 A0A087WWV3 80 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 DENND3A2RUS2 1198 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 GOLGA6L3A6NEY3 463 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 SFI1A8K8P3 1242 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 ZBTB42B2RXF5 422 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 INO80B-WBP1J3KQ70 363 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 BIN1O00499 593 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 N4BP3O15049 544 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 MAPK13O15264 365 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 ADCY6O43306 1168 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 CBFA2T2O43439 604 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 EFCAB14O75071 495 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 TOM1L1O75674 476 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 RFC2P35250 354 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 PSMC2P35998 433 aaKnown RBP8.12□□□□□ -1.11
EPHA4-210ENST00000463446 LIG4P49917 911 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 AP3M2P53677 418 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 CAP1Q01518 475 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 STK4Q13043 487 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 ADAM9Q13443 819 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 PRPF4BQ13523 1007 aaKnown RBP8.12□□□□□ -1.11
EPHA4-210ENST00000463446 GSE1Q14687 1217 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 MTFR1Q15390 333 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 ANO6Q4KMQ2 910 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 FAM26DQ5JW98 314 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 MARCH8Q5T0T0 291 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 TMEM63BQ5T3F8 832 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 FILIP1Q7Z7B0 1213 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 SFR1Q86XK3 245 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 TRIM50Q86XT4 487 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 SLC9A9Q8IVB4 645 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 CD302Q8IX05 232 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 C12orf56Q8IXR9 622 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 GRAMD1CQ8IYS0 662 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 RPUSD2Q8IZ73 545 aaKnown RBP8.12□□□□□ -1.11
EPHA4-210ENST00000463446 CSGALNACT2Q8N6G5 542 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 TMEM161BQ8NDZ6 487 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 APBB2Q92870 758 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 P2RX5Q93086 422 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 MKNK1Q9BUB5 465 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 FZD8Q9H461 694 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 THAP9Q9H5L6 903 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 UBN1Q9NPG3 1134 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 ARHGAP28Q9P2N2 729 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 LRRC37A2A6NM11 1700 aa8.12□□□□□ -1.11
EPHA4-210ENST00000463446 LCTP09848 1927 aa8.11□□□□□ -1.11
EPHA4-210ENST00000463446 RSPH10B2B2RC85 870 aa8.11□□□□□ -1.11
EPHA4-210ENST00000463446 PPP1R3GB7ZBB8 358 aa8.11□□□□□ -1.11
EPHA4-210ENST00000463446 HNRNPDLO14979 420 aaKnown RBP8.11□□□□□ -1.11
EPHA4-210ENST00000463446 SLC16A4O15374 487 aa8.11□□□□□ -1.11
EPHA4-210ENST00000463446 TREHO43280 583 aa8.11□□□□□ -1.11
EPHA4-210ENST00000463446 PIGRP01833 764 aa8.11□□□□□ -1.11
EPHA4-210ENST00000463446 PFKMP08237 780 aa8.11□□□□□ -1.11
EPHA4-210ENST00000463446 RSPH10BP0C881 870 aa8.11□□□□□ -1.11
EPHA4-210ENST00000463446 EPB41P11171 864 aaKnown RBP8.11□□□□□ -1.11
EPHA4-210ENST00000463446 COL6A1P12109 1028 aa8.11□□□□□ -1.11
EPHA4-210ENST00000463446 KRT13P13646 458 aa8.11□□□□□ -1.11
EPHA4-210ENST00000463446 GLRA2P23416 452 aa8.11□□□□□ -1.11
EPHA4-210ENST00000463446 EEF1GP26641 437 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms