RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 PABPC5Q96DU9 382 aaKnown RBP14.56□□□□□ -0.08
HDAC1-203ENST00000463172 CCDC51Q96ER9 411 aa14.56□□□□□ -0.08
HDAC1-203ENST00000463172 ZNF558Q96NG5 402 aa14.56□□□□□ -0.08
HDAC1-203ENST00000463172 UHRF1Q96T88 793 aaPredicted RBP14.56□□□□□ -0.08
HDAC1-203ENST00000463172 IFT122Q9HBG6 1241 aa14.56□□□□□ -0.08
HDAC1-203ENST00000463172 LRWD1Q9UFC0 647 aa14.56□□□□□ -0.08
HDAC1-203ENST00000463172 TCF20Q9UGU0 1960 aaKnown RBP14.56□□□□□ -0.08
HDAC1-203ENST00000463172 INO80B-WBP1J3KQ70 363 aa14.55□□□□□ -0.08
HDAC1-203ENST00000463172 TNFRSF10AO00220 468 aa14.55□□□□□ -0.08
HDAC1-203ENST00000463172 ZBTB39O15060 712 aa14.55□□□□□ -0.08
HDAC1-203ENST00000463172 USO1O60763 962 aaKnown RBP14.55□□□□□ -0.08
HDAC1-203ENST00000463172 ZNF623O75123 536 aa14.55□□□□□ -0.08
HDAC1-203ENST00000463172 ITGB1P05556 798 aa14.55□□□□□ -0.08
HDAC1-203ENST00000463172 KCNA5P22460 613 aa14.55□□□□□ -0.08
HDAC1-203ENST00000463172 CCT6AP40227 531 aaKnown RBP14.55□□□□□ -0.08
HDAC1-203ENST00000463172 PRPHP41219 470 aa14.55□□□□□ -0.08
HDAC1-203ENST00000463172 PTGDRQ13258 359 aa14.55□□□□□ -0.08
HDAC1-203ENST00000463172 KRT79Q5XKE5 535 aa14.55□□□□□ -0.08
HDAC1-203ENST00000463172 DTHD1Q6ZMT9 781 aa14.55□□□□□ -0.08
HDAC1-203ENST00000463172 SPPL3Q8TCT6 385 aa14.55□□□□□ -0.08
HDAC1-203ENST00000463172 URGCPQ8TCY9 931 aa14.55□□□□□ -0.08
HDAC1-203ENST00000463172 CASD1Q96PB1 797 aa14.55□□□□□ -0.08
HDAC1-203ENST00000463172 UBN1Q9NPG3 1134 aa14.55□□□□□ -0.08
HDAC1-203ENST00000463172 FAM105AQ9NUU6 356 aa14.55□□□□□ -0.08
HDAC1-203ENST00000463172 DAXXQ9UER7 740 aaPredicted RBP14.55□□□□□ -0.08
HDAC1-203ENST00000463172 LZTS1Q9Y250 596 aa14.55□□□□□ -0.08
HDAC1-203ENST00000463172 CNTNAP2Q9UHC6 1331 aa14.55□□□□□ -0.08
HDAC1-203ENST00000463172 BDP1A6H8Y1 2624 aa14.55□□□□□ -0.08
HDAC1-203ENST00000463172 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.54□□□□□ -0.08
HDAC1-203ENST00000463172 MED24O75448 989 aa14.54□□□□□ -0.08
HDAC1-203ENST00000463172 FGF18O76093 207 aa14.54□□□□□ -0.08
HDAC1-203ENST00000463172 SPATA31C1P0DKV0 1188 aa14.54□□□□□ -0.08
HDAC1-203ENST00000463172 SRGAP2BP0DMP2 458 aa14.54□□□□□ -0.08
HDAC1-203ENST00000463172 BMP1P13497 986 aa14.54□□□□□ -0.08
HDAC1-203ENST00000463172 PDCP20941 246 aa14.54□□□□□ -0.08
HDAC1-203ENST00000463172 ALDH7A1P49419 539 aaKnown RBP14.54□□□□□ -0.08
HDAC1-203ENST00000463172 PTENP60484 403 aa14.54□□□□□ -0.08
HDAC1-203ENST00000463172 RNASELQ05823 741 aaKnown RBP14.54□□□□□ -0.08
HDAC1-203ENST00000463172 LEXMQ3ZCV2 418 aa14.54□□□□□ -0.08
HDAC1-203ENST00000463172 LARP1BQ659C4 914 aaKnown RBP14.54□□□□□ -0.08
HDAC1-203ENST00000463172 NOTUMQ6P988 496 aa14.54□□□□□ -0.08
HDAC1-203ENST00000463172 ZNF598Q86UK7 904 aaKnown RBP14.54□□□□□ -0.08
HDAC1-203ENST00000463172 IFNLR1Q8IU57 520 aaPredicted RBP14.54□□□□□ -0.08
HDAC1-203ENST00000463172 ZBTB8OSQ8IWT0 167 aa14.54□□□□□ -0.08
HDAC1-203ENST00000463172 HELQQ8TDG4 1101 aa14.54□□□□□ -0.08
HDAC1-203ENST00000463172 NFKBIZQ9BYH8 718 aa14.54□□□□□ -0.08
HDAC1-203ENST00000463172 TRIM6Q9C030 488 aaPredicted RBP14.54□□□□□ -0.08
HDAC1-203ENST00000463172 POLR3FQ9H1D9 316 aaPredicted RBP14.54□□□□□ -0.08
HDAC1-203ENST00000463172 C2orf40Q9H1Z8 148 aa14.54□□□□□ -0.08
HDAC1-203ENST00000463172 CWH43Q9H720 699 aa14.54□□□□□ -0.08
HDAC1-203ENST00000463172 XPNPEP1Q9NQW7 623 aa14.54□□□□□ -0.08
HDAC1-203ENST00000463172 TLR9Q9NR96 1032 aa14.54□□□□□ -0.08
HDAC1-203ENST00000463172 CLDND1Q9NY35 253 aa14.54□□□□□ -0.08
HDAC1-203ENST00000463172 STK39Q9UEW8 545 aa14.54□□□□□ -0.08
HDAC1-203ENST00000463172 SPTBN5Q9NRC6 3674 aaKnown RBP14.53□□□□□ -0.08
HDAC1-203ENST00000463172 VCANP13611 3396 aa14.53□□□□□ -0.08
HDAC1-203ENST00000463172 PLXNA4Q9HCM2 1894 aa14.53□□□□□ -0.08
HDAC1-203ENST00000463172 ARL2P36404 184 aa14.53□□□□□ -0.08
HDAC1-203ENST00000463172 KCNQ1P51787 676 aa14.53□□□□□ -0.08
HDAC1-203ENST00000463172 PLCB3Q01970 1234 aa14.53□□□□□ -0.08
HDAC1-203ENST00000463172 PPP2R5AQ15172 486 aa14.53□□□□□ -0.08
HDAC1-203ENST00000463172 CLLU1OSQ5K130 101 aa14.53□□□□□ -0.08
HDAC1-203ENST00000463172 POTEGQ6S5H5 508 aa14.53□□□□□ -0.08
HDAC1-203ENST00000463172 KCNT2Q6UVM3 1135 aa14.53□□□□□ -0.08
HDAC1-203ENST00000463172 SNX29Q8TEQ0 813 aa14.53□□□□□ -0.08
HDAC1-203ENST00000463172 SPG21Q9NZD8 308 aa14.53□□□□□ -0.08
HDAC1-203ENST00000463172 KANSL3Q9P2N6 904 aa14.53□□□□□ -0.08
HDAC1-203ENST00000463172 PCDHB6Q9Y5E3 794 aa14.53□□□□□ -0.08
HDAC1-203ENST00000463172 PCDHB2Q9Y5E7 798 aa14.53□□□□□ -0.08
HDAC1-203ENST00000463172 ATG2AQ2TAZ0 1938 aa14.53□□□□□ -0.08
HDAC1-203ENST00000463172 LRRIQ4A6NIV6 560 aa14.52□□□□□ -0.09
HDAC1-203ENST00000463172 CSPG5O95196 566 aa14.52□□□□□ -0.09
HDAC1-203ENST00000463172 BMP15O95972 392 aa14.52□□□□□ -0.09
HDAC1-203ENST00000463172 CAPSQ13938 189 aa14.52□□□□□ -0.09
HDAC1-203ENST00000463172 NBR1Q14596 966 aa14.52□□□□□ -0.09
HDAC1-203ENST00000463172 TMEM132AQ24JP5 1023 aa14.52□□□□□ -0.09
HDAC1-203ENST00000463172 NOMO2Q5JPE7 1267 aa14.52□□□□□ -0.09
HDAC1-203ENST00000463172 PADI6Q6TGC4 694 aa14.52□□□□□ -0.09
HDAC1-203ENST00000463172 KCTD17Q8N5Z5 321 aa14.52□□□□□ -0.09
HDAC1-203ENST00000463172 C4orf32Q8N8J7 132 aa14.52□□□□□ -0.09
HDAC1-203ENST00000463172 MRPS27Q92552 414 aaKnown RBP14.52□□□□□ -0.09
HDAC1-203ENST00000463172 TMEM169Q96HH4 297 aa14.52□□□□□ -0.09
HDAC1-203ENST00000463172 IFT74Q96LB3 600 aa14.52□□□□□ -0.09
HDAC1-203ENST00000463172 PRIMPOLQ96LW4 560 aa14.52□□□□□ -0.09
HDAC1-203ENST00000463172 FAM193BQ96PV7 902 aaPredicted RBP14.52□□□□□ -0.09
HDAC1-203ENST00000463172 CDCA3Q99618 268 aaPredicted RBP14.52□□□□□ -0.09
HDAC1-203ENST00000463172 BACH2Q9BYV9 841 aa14.52□□□□□ -0.09
HDAC1-203ENST00000463172 IGFLR1Q9H665 355 aa14.52□□□□□ -0.09
HDAC1-203ENST00000463172 NGRNQ9NPE2 291 aaKnown RBP14.52□□□□□ -0.09
HDAC1-203ENST00000463172 ENTPD7Q9NQZ7 604 aa14.52□□□□□ -0.09
HDAC1-203ENST00000463172 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.52□□□□□ -0.09
HDAC1-203ENST00000463172 PRMT7Q9NVM4 692 aaPredicted RBP14.52□□□□□ -0.09
HDAC1-203ENST00000463172 KIAA1024Q9UPX6 916 aa14.52□□□□□ -0.09
HDAC1-203ENST00000463172 DNM3Q9UQ16 869 aa14.52□□□□□ -0.09
HDAC1-203ENST00000463172 CD2BP2O95400 341 aaKnown RBP14.51□□□□□ -0.09
HDAC1-203ENST00000463172 ITGA4P13612 1032 aa14.51□□□□□ -0.09
HDAC1-203ENST00000463172 ATF7P17544 494 aaPredicted RBP14.51□□□□□ -0.09
HDAC1-203ENST00000463172 CYP11B2P19099 503 aa14.51□□□□□ -0.09
HDAC1-203ENST00000463172 GLRA2P23416 452 aa14.51□□□□□ -0.09
HDAC1-203ENST00000463172 TOB1P50616 345 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms