RNA–Protein interactions for RNA: ENST00000463094.5

MSH5-210, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-210ENST00000463094 ENTPD7Q9NQZ7 604 aa22.13■■□□□ 1.13
MSH5-210ENST00000463094 SPG21Q9NZD8 308 aa22.13■■□□□ 1.13
MSH5-210ENST00000463094 STK24Q9Y6E0 443 aa22.13■■□□□ 1.13
MSH5-210ENST00000463094 CUL9Q8IWT3 2517 aa22.13■■□□□ 1.13
MSH5-210ENST00000463094 INO80B-WBP1J3KQ70 363 aa22.12■■□□□ 1.13
MSH5-210ENST00000463094 USO1O60763 962 aaKnown RBP22.12■■□□□ 1.13
MSH5-210ENST00000463094 SRGAP2BP0DMP2 458 aa22.12■■□□□ 1.13
MSH5-210ENST00000463094 RARRES1P49788 294 aa22.12■■□□□ 1.13
MSH5-210ENST00000463094 CLLU1OSQ5K130 101 aa22.12■■□□□ 1.13
MSH5-210ENST00000463094 ZNF598Q86UK7 904 aaKnown RBP22.12■■□□□ 1.13
MSH5-210ENST00000463094 LZTS1Q9Y250 596 aa22.12■■□□□ 1.13
MSH5-210ENST00000463094 INPP5FQ9Y2H2 1132 aa22.12■■□□□ 1.13
MSH5-210ENST00000463094 DNAJB1P25685 340 aa22.11■■□□□ 1.13
MSH5-210ENST00000463094 AXLP30530 894 aa22.11■■□□□ 1.13
MSH5-210ENST00000463094 SSTR3P32745 418 aaPredicted RBP22.11■■□□□ 1.13
MSH5-210ENST00000463094 NRIP1P48552 1158 aa22.11■■□□□ 1.13
MSH5-210ENST00000463094 LONRF3Q496Y0 759 aa22.11■■□□□ 1.13
MSH5-210ENST00000463094 RBM23Q86U06 439 aaKnown RBP22.11■■□□□ 1.13
MSH5-210ENST00000463094 TMEM87AQ8NBN3 555 aa22.11■■□□□ 1.13
MSH5-210ENST00000463094 CNNM3Q8NE01 707 aa22.11■■□□□ 1.13
MSH5-210ENST00000463094 MCPH1Q8NEM0 835 aa22.11■■□□□ 1.13
MSH5-210ENST00000463094 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.11■■□□□ 1.13
MSH5-210ENST00000463094 MRPS27Q92552 414 aaKnown RBP22.11■■□□□ 1.13
MSH5-210ENST00000463094 POLR3CQ9BUI4 534 aaPredicted RBP22.11■■□□□ 1.13
MSH5-210ENST00000463094 HCSTQ9UBK5 93 aa22.11■■□□□ 1.13
MSH5-210ENST00000463094 PCDHB2Q9Y5E7 798 aa22.11■■□□□ 1.13
MSH5-210ENST00000463094 ARHGEF35A5YM69 484 aa22.1■■□□□ 1.13
MSH5-210ENST00000463094 GRXCR2A6NFK2 248 aa22.1■■□□□ 1.13
MSH5-210ENST00000463094 CA8P35219 290 aa22.1■■□□□ 1.13
MSH5-210ENST00000463094 IRS1P35568 1242 aa22.1■■□□□ 1.13
MSH5-210ENST00000463094 PLCB3Q01970 1234 aa22.1■■□□□ 1.13
MSH5-210ENST00000463094 CAMK1Q14012 370 aa22.1■■□□□ 1.13
MSH5-210ENST00000463094 NOMO2Q5JPE7 1267 aa22.1■■□□□ 1.13
MSH5-210ENST00000463094 NOTUMQ6P988 496 aa22.1■■□□□ 1.13
MSH5-210ENST00000463094 CATSPER3Q86XQ3 398 aa22.1■■□□□ 1.13
MSH5-210ENST00000463094 HACE1Q8IYU2 909 aa22.1■■□□□ 1.13
MSH5-210ENST00000463094 LPPQ93052 612 aa22.1■■□□□ 1.13
MSH5-210ENST00000463094 TMEM169Q96HH4 297 aa22.1■■□□□ 1.13
MSH5-210ENST00000463094 TMX3Q96JJ7 454 aa22.1■■□□□ 1.13
MSH5-210ENST00000463094 FAM193BQ96PV7 902 aaPredicted RBP22.1■■□□□ 1.13
MSH5-210ENST00000463094 TRIM6Q9C030 488 aaPredicted RBP22.1■■□□□ 1.13
MSH5-210ENST00000463094 POLR3FQ9H1D9 316 aaPredicted RBP22.1■■□□□ 1.13
MSH5-210ENST00000463094 NGRNQ9NPE2 291 aaKnown RBP22.1■■□□□ 1.13
MSH5-210ENST00000463094 RNF19AQ9NV58 838 aa22.1■■□□□ 1.13
MSH5-210ENST00000463094 LRWD1Q9UFC0 647 aa22.1■■□□□ 1.13
MSH5-210ENST00000463094 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.1■■□□□ 1.13
MSH5-210ENST00000463094 ZNF623O75123 536 aa22.09■■□□□ 1.13
MSH5-210ENST00000463094 ZC3H11AO75152 810 aaKnown RBP eCLIP22.09■■□□□ 1.13
MSH5-210ENST00000463094 ATF7P17544 494 aaPredicted RBP22.09■■□□□ 1.13
MSH5-210ENST00000463094 U2AF2P26368 475 aaKnown RBP eCLIP22.09■■□□□ 1.134e-6■■□□□ 13.2
MSH5-210ENST00000463094 RPA1P27694 616 aa22.09■■□□□ 1.13
MSH5-210ENST00000463094 CCT6AP40227 531 aaKnown RBP22.09■■□□□ 1.13
MSH5-210ENST00000463094 PTENP60484 403 aa22.09■■□□□ 1.13
MSH5-210ENST00000463094 POU5F1BQ06416 359 aa22.09■■□□□ 1.13
MSH5-210ENST00000463094 COL19A1Q14993 1142 aa22.09■■□□□ 1.13
MSH5-210ENST00000463094 LRRC55Q6ZSA7 311 aa22.09■■□□□ 1.13
MSH5-210ENST00000463094 MAEAQ7L5Y9 396 aa22.09■■□□□ 1.13
MSH5-210ENST00000463094 TMC7Q7Z402 723 aa22.09■■□□□ 1.13
MSH5-210ENST00000463094 EFHBQ8N7U6 833 aa22.09■■□□□ 1.13
MSH5-210ENST00000463094 CCDC51Q96ER9 411 aa22.09■■□□□ 1.13
MSH5-210ENST00000463094 CDCA3Q99618 268 aaPredicted RBP22.09■■□□□ 1.13
MSH5-210ENST00000463094 TCF25Q9BQ70 676 aa22.09■■□□□ 1.13
MSH5-210ENST00000463094 UBN1Q9NPG3 1134 aa22.09■■□□□ 1.13
MSH5-210ENST00000463094 XPNPEP1Q9NQW7 623 aa22.09■■□□□ 1.13
MSH5-210ENST00000463094 KANSL3Q9P2N6 904 aa22.09■■□□□ 1.13
MSH5-210ENST00000463094 DBR1Q9UK59 544 aaKnown RBP22.09■■□□□ 1.13
MSH5-210ENST00000463094 SMC3Q9UQE7 1217 aa22.09■■□□□ 1.13
MSH5-210ENST00000463094 FNDC1Q4ZHG4 1894 aaPredicted RBP22.09■■□□□ 1.13
MSH5-210ENST00000463094 CNTNAP2Q9UHC6 1331 aa22.08■■□□□ 1.13
MSH5-210ENST00000463094 LRRIQ4A6NIV6 560 aa22.08■■□□□ 1.13
MSH5-210ENST00000463094 LAD1O00515 517 aa22.08■■□□□ 1.13
MSH5-210ENST00000463094 MED24O75448 989 aa22.08■■□□□ 1.13
MSH5-210ENST00000463094 IL9P15248 144 aa22.08■■□□□ 1.13
MSH5-210ENST00000463094 MUTP22033 750 aa22.08■■□□□ 1.13
MSH5-210ENST00000463094 CLUL1Q15846 466 aa22.08■■□□□ 1.13
MSH5-210ENST00000463094 TMEM132AQ24JP5 1023 aa22.08■■□□□ 1.13
MSH5-210ENST00000463094 CTC1Q2NKJ3 1217 aa22.08■■□□□ 1.13
MSH5-210ENST00000463094 PLPP4Q5VZY2 271 aa22.08■■□□□ 1.13
MSH5-210ENST00000463094 ADGRD2Q7Z7M1 963 aa22.08■■□□□ 1.13
MSH5-210ENST00000463094 ZBTB8OSQ8IWT0 167 aa22.08■■□□□ 1.13
MSH5-210ENST00000463094 MINDY3Q9H8M7 445 aa22.08■■□□□ 1.13
MSH5-210ENST00000463094 CD207Q9UJ71 328 aa22.08■■□□□ 1.13
MSH5-210ENST00000463094 TCF20Q9UGU0 1960 aaKnown RBP22.07■■□□□ 1.12
MSH5-210ENST00000463094 A0A087WWV3 80 aa22.07■■□□□ 1.12
MSH5-210ENST00000463094 SPATA31C1P0DKV0 1188 aa22.07■■□□□ 1.12
MSH5-210ENST00000463094 GJB2P29033 226 aa22.07■■□□□ 1.12
MSH5-210ENST00000463094 GTF2F1P35269 517 aaKnown RBP eCLIP22.07■■□□□ 1.12
MSH5-210ENST00000463094 ARL2P36404 184 aa22.07■■□□□ 1.12
MSH5-210ENST00000463094 PBX3P40426 434 aa22.07■■□□□ 1.12
MSH5-210ENST00000463094 FXR2P51116 673 aaKnown RBP eCLIP22.07■■□□□ 1.12
MSH5-210ENST00000463094 BCAR1P56945 870 aa22.07■■□□□ 1.12
MSH5-210ENST00000463094 ADAM15Q13444 863 aa22.07■■□□□ 1.12
MSH5-210ENST00000463094 CAPSQ13938 189 aa22.07■■□□□ 1.12
MSH5-210ENST00000463094 RILPL1Q5EBL4 403 aa22.07■■□□□ 1.12
MSH5-210ENST00000463094 POTEGQ6S5H5 508 aa22.07■■□□□ 1.12
MSH5-210ENST00000463094 TBC1D32Q96NH3 1257 aa22.07■■□□□ 1.12
MSH5-210ENST00000463094 GBP3Q9H0R5 595 aa22.07■■□□□ 1.12
MSH5-210ENST00000463094 RSAD1Q9HA92 442 aa22.07■■□□□ 1.12
MSH5-210ENST00000463094 KIAA1671Q9BY89 1806 aa22.07■■□□□ 1.12
MSH5-210ENST00000463094 ITGA4P13612 1032 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms