RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 RUBCNQ92622 972 aa8.79□□□□□ -1
SMC3-202ENST00000462899 RRP36Q96EU6 259 aaKnown RBP8.79□□□□□ -1
SMC3-202ENST00000462899 RHOBTB2Q9BYZ6 727 aa8.79□□□□□ -1
SMC3-202ENST00000462899 ADAMTS10Q9H324 1103 aa8.79□□□□□ -1
SMC3-202ENST00000462899 PSTPIP2Q9H939 334 aa8.79□□□□□ -1
SMC3-202ENST00000462899 LY9Q9HBG7 655 aa8.79□□□□□ -1
SMC3-202ENST00000462899 AGO4Q9HCK5 861 aaKnown RBP8.79□□□□□ -1
SMC3-202ENST00000462899 IGSF9Q9P2J2 1179 aa8.79□□□□□ -1
SMC3-202ENST00000462899 PCDHA6Q9UN73 950 aa8.79□□□□□ -1
SMC3-202ENST00000462899 PCDHA8Q9Y5H6 950 aa8.79□□□□□ -1
SMC3-202ENST00000462899 COL4A2P08572 1712 aa8.78□□□□□ -1
SMC3-202ENST00000462899 A0A0U1RQF3 1178 aa8.78□□□□□ -1
SMC3-202ENST00000462899 NT5C1B-RDH14C9J2C7 533 aa8.78□□□□□ -1
SMC3-202ENST00000462899 DHX15O43143 795 aaKnown RBP8.78□□□□□ -1
SMC3-202ENST00000462899 B4GALT3O60512 393 aa8.78□□□□□ -1
SMC3-202ENST00000462899 LILRB3O75022 631 aa8.78□□□□□ -1
SMC3-202ENST00000462899 DDAH1O94760 285 aa8.78□□□□□ -1
SMC3-202ENST00000462899 CXCL14O95715 111 aa8.78□□□□□ -1
SMC3-202ENST00000462899 VTNP04004 478 aa8.78□□□□□ -1
SMC3-202ENST00000462899 METAP2P50579 478 aaKnown RBP eCLIP8.78□□□□□ -1
SMC3-202ENST00000462899 CLCN4P51793 760 aa8.78□□□□□ -1
SMC3-202ENST00000462899 TBC1D8BQ0IIM8 1120 aa8.78□□□□□ -1
SMC3-202ENST00000462899 GIT2Q14161 759 aa8.78□□□□□ -1
SMC3-202ENST00000462899 RSPO4Q2I0M5 234 aaPredicted RBP8.78□□□□□ -1
SMC3-202ENST00000462899 LETM2Q2VYF4 491 aa8.78□□□□□ -1
SMC3-202ENST00000462899 CEP55Q53EZ4 464 aa8.78□□□□□ -1
SMC3-202ENST00000462899 PHLDB3Q6NSJ2 640 aa8.78□□□□□ -1
SMC3-202ENST00000462899 DDX53Q86TM3 631 aaKnown RBP8.78□□□□□ -1
SMC3-202ENST00000462899 SMC5Q8IY18 1101 aa8.78□□□□□ -1
SMC3-202ENST00000462899 MB21D2Q8IYB1 491 aaPredicted RBP8.78□□□□□ -1
SMC3-202ENST00000462899 ZNF654Q8IZM8 581 aa8.78□□□□□ -1
SMC3-202ENST00000462899 CMASQ8NFW8 434 aaPredicted RBP8.78□□□□□ -1
SMC3-202ENST00000462899 HELQQ8TDG4 1101 aa8.78□□□□□ -1
SMC3-202ENST00000462899 RIN2Q8WYP3 895 aaPredicted RBP8.78□□□□□ -1
SMC3-202ENST00000462899 ACSF2Q96CM8 615 aaPredicted RBP8.78□□□□□ -1
SMC3-202ENST00000462899 IGSF21Q96ID5 467 aa8.78□□□□□ -1
SMC3-202ENST00000462899 PPP1R16BQ96T49 567 aa8.78□□□□□ -1
SMC3-202ENST00000462899 TRAIPQ9BWF2 469 aa8.78□□□□□ -1
SMC3-202ENST00000462899 MRPL9Q9BYD2 267 aaKnown RBP8.78□□□□□ -1
SMC3-202ENST00000462899 LNPKQ9C0E8 428 aa8.78□□□□□ -1
SMC3-202ENST00000462899 DIAPH3Q9NSV4 1193 aa8.78□□□□□ -1
SMC3-202ENST00000462899 EPS15L1Q9UBC2 864 aa8.78□□□□□ -1
SMC3-202ENST00000462899 ZFYVE26Q68DK2 2539 aa8.78□□□□□ -1
SMC3-202ENST00000462899 SPDYE3A6NKU9 549 aa8.77□□□□□ -1.01
SMC3-202ENST00000462899 HIP1O00291 1037 aa8.77□□□□□ -1.01
SMC3-202ENST00000462899 MEIS1O00470 390 aa8.77□□□□□ -1.01
SMC3-202ENST00000462899 CFHP08603 1231 aa8.77□□□□□ -1.01
SMC3-202ENST00000462899 SRFP11831 508 aa8.77□□□□□ -1.01
SMC3-202ENST00000462899 EIF4BP23588 611 aaKnown RBP8.77□□□□□ -1.01
SMC3-202ENST00000462899 COL9A3Q14050 684 aaPredicted RBP8.77□□□□□ -1.01
SMC3-202ENST00000462899 ZC3H14Q6PJT7 736 aaKnown RBP8.77□□□□□ -1.01
SMC3-202ENST00000462899 CATIPQ7Z7H3 387 aa8.77□□□□□ -1.01
SMC3-202ENST00000462899 CABP7Q86V35 215 aa8.77□□□□□ -1.01
SMC3-202ENST00000462899 C1orf210Q8IVY1 113 aa8.77□□□□□ -1.01
SMC3-202ENST00000462899 KCNG4Q8TDN1 519 aa8.77□□□□□ -1.01
SMC3-202ENST00000462899 CRYGNQ8WXF5 182 aa8.77□□□□□ -1.01
SMC3-202ENST00000462899 RSAD2Q8WXG1 361 aa8.77□□□□□ -1.01
SMC3-202ENST00000462899 RSPH1Q8WYR4 309 aa8.77□□□□□ -1.01
SMC3-202ENST00000462899 TMEM169Q96HH4 297 aa8.77□□□□□ -1.01
SMC3-202ENST00000462899 SDF4Q9BRK5 362 aa8.77□□□□□ -1.01
SMC3-202ENST00000462899 MYL10Q9BUA6 226 aa8.77□□□□□ -1.01
SMC3-202ENST00000462899 TBC1D17Q9HA65 648 aa8.77□□□□□ -1.01
SMC3-202ENST00000462899 TSR3Q9UJK0 312 aaKnown RBP8.77□□□□□ -1.01
SMC3-202ENST00000462899 FBXL21Q9UKT6 434 aa8.77□□□□□ -1.01
SMC3-202ENST00000462899 MAFBQ9Y5Q3 323 aaPredicted RBP8.77□□□□□ -1.01
SMC3-202ENST00000462899 ANKRD11Q6UB99 2663 aaPredicted RBP8.77□□□□□ -1.01
SMC3-202ENST00000462899 RALGAPA1Q6GYQ0 2036 aa8.76□□□□□ -1.01
SMC3-202ENST00000462899 LAMA5O15230 3695 aa8.76□□□□□ -1.01
SMC3-202ENST00000462899 SMG1Q96Q15 3661 aaKnown RBP8.76□□□□□ -1.01
SMC3-202ENST00000462899 ARID2Q68CP9 1835 aa8.76□□□□□ -1.01
SMC3-202ENST00000462899 IGLV3-22A0A075B6J6 115 aa8.76□□□□□ -1.01
SMC3-202ENST00000462899 E7EWF7 191 aa8.76□□□□□ -1.01
SMC3-202ENST00000462899 EFEMP2O95967 443 aa8.76□□□□□ -1.01
SMC3-202ENST00000462899 DCNP07585 359 aaKnown RBP8.76□□□□□ -1.01
SMC3-202ENST00000462899 GALTP07902 379 aa8.76□□□□□ -1.01
SMC3-202ENST00000462899 TGM1P22735 817 aa8.76□□□□□ -1.01
SMC3-202ENST00000462899 SREBF1P36956 1147 aa8.76□□□□□ -1.01
SMC3-202ENST00000462899 ALDH7A1P49419 539 aaKnown RBP8.76□□□□□ -1.01
SMC3-202ENST00000462899 CLK2P49760 499 aaKnown RBP8.76□□□□□ -1.01
SMC3-202ENST00000462899 GPC3P51654 580 aa8.76□□□□□ -1.01
SMC3-202ENST00000462899 CLCN3P51790 818 aa8.76□□□□□ -1.01
SMC3-202ENST00000462899 ATXN1P54253 815 aaKnown RBP8.76□□□□□ -1.01
SMC3-202ENST00000462899 NLRP11P59045 1033 aaKnown RBP8.76□□□□□ -1.01
SMC3-202ENST00000462899 ZNF528Q3MIS6 628 aa8.76□□□□□ -1.01
SMC3-202ENST00000462899 NIPA1Q7RTP0 329 aa8.76□□□□□ -1.01
SMC3-202ENST00000462899 PPFIBP1Q86W92 1011 aa8.76□□□□□ -1.01
SMC3-202ENST00000462899 TEX2Q8IWB9 1127 aa8.76□□□□□ -1.01
SMC3-202ENST00000462899 RNF168Q8IYW5 571 aaPredicted RBP8.76□□□□□ -1.01
SMC3-202ENST00000462899 ABI1Q8IZP0 508 aa8.76□□□□□ -1.01
SMC3-202ENST00000462899 CMTR1Q8N1G2 835 aaKnown RBP8.76□□□□□ -1.01
SMC3-202ENST00000462899 SLC44A3Q8N4M1 653 aa8.76□□□□□ -1.01
SMC3-202ENST00000462899 NELL1Q92832 810 aa8.76□□□□□ -1.01
SMC3-202ENST00000462899 KLHL5Q96PQ7 755 aa8.76□□□□□ -1.01
SMC3-202ENST00000462899 MYADMQ96S97 322 aa8.76□□□□□ -1.01
SMC3-202ENST00000462899 LZTS2Q9BRK4 669 aa8.76□□□□□ -1.01
SMC3-202ENST00000462899 NRDE2Q9H7Z3 1164 aa8.76□□□□□ -1.01
SMC3-202ENST00000462899 WDR6Q9NNW5 1121 aaKnown RBP8.76□□□□□ -1.01
SMC3-202ENST00000462899 ZNF302Q9NR11 478 aa8.76□□□□□ -1.01
SMC3-202ENST00000462899 TBC1D13Q9NVG8 400 aa8.76□□□□□ -1.01
SMC3-202ENST00000462899 SEC63Q9UGP8 760 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms