RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 VWA3AA6NCI4 1184 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 CCDC169A6NNP5 214 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 C5orf67F2Z3F1 127 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 H0YCG3 227 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 ZC3H11AO75152 810 aaKnown RBP eCLIP9.91□□□□□ -0.825e-12■■□□□ 12.8
DDX39B-216ENST00000462421 FGFR1P11362 822 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 ITGA4P13612 1032 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 NDUFV1P49821 464 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 EFNA5P52803 228 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 SMTNP53814 917 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 SPIRE1Q08AE8 756 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 ST3GAL1Q11201 340 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 STRN3Q13033 797 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 MAPK6Q16659 721 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 ARL6IP4Q66PJ3 421 aaKnown RBP9.91□□□□□ -0.82
DDX39B-216ENST00000462421 POTEGQ6S5H5 508 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 PADI6Q6TGC4 694 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 CATSPER3Q86XQ3 398 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 KCTD17Q8N5Z5 321 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 LINC01465Q8N7H1 131 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 HELQQ8TDG4 1101 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 CLP1Q92989 425 aaKnown RBP9.91□□□□□ -0.82
DDX39B-216ENST00000462421 ZNF689Q96CS4 500 aaPredicted RBP9.91□□□□□ -0.82
DDX39B-216ENST00000462421 AK8Q96MA6 479 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 ASB2Q96Q27 587 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 HSD17B14Q9BPX1 270 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 TIPINQ9BVW5 301 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 GBP3Q9H0R5 595 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 TMEM60Q9H2L4 133 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 TMX1Q9H3N1 280 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 TLR9Q9NR96 1032 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 DDX19AQ9NUU7 478 aaKnown RBP9.91□□□□□ -0.82
DDX39B-216ENST00000462421 CLDND1Q9NY35 253 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 CCDC39Q9UFE4 941 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 KIAA1024Q9UPX6 916 aa9.91□□□□□ -0.82
DDX39B-216ENST00000462421 N4BP3O15049 544 aa9.9□□□□□ -0.82
DDX39B-216ENST00000462421 SLC26A4O43511 780 aa9.9□□□□□ -0.82
DDX39B-216ENST00000462421 EDIL3O43854 480 aa9.9□□□□□ -0.82
DDX39B-216ENST00000462421 MGEA5O60502 916 aa9.9□□□□□ -0.82
DDX39B-216ENST00000462421 KCNA5P22460 613 aa9.9□□□□□ -0.82
DDX39B-216ENST00000462421 ABCD1P33897 745 aa9.9□□□□□ -0.82
DDX39B-216ENST00000462421 MATR3P43243 847 aaKnown RBP eCLIP9.9□□□□□ -0.82
DDX39B-216ENST00000462421 POU5F1BQ06416 359 aa9.9□□□□□ -0.82
DDX39B-216ENST00000462421 MKRN4PQ13434 485 aaPredicted RBP9.9□□□□□ -0.82
DDX39B-216ENST00000462421 DRP2Q13474 957 aa9.9□□□□□ -0.82
DDX39B-216ENST00000462421 SF3A1Q15459 793 aaKnown RBP9.9□□□□□ -0.82
DDX39B-216ENST00000462421 NOMO2Q5JPE7 1267 aa9.9□□□□□ -0.82
DDX39B-216ENST00000462421 TMC7Q7Z402 723 aa9.9□□□□□ -0.82
DDX39B-216ENST00000462421 KSR1Q8IVT5 923 aa9.9□□□□□ -0.82
DDX39B-216ENST00000462421 KLHL23Q8NBE8 558 aa9.9□□□□□ -0.82
DDX39B-216ENST00000462421 COLGALT1Q8NBJ5 622 aa9.9□□□□□ -0.82
DDX39B-216ENST00000462421 LINC01599Q8WXQ3 324 aa9.9□□□□□ -0.82
DDX39B-216ENST00000462421 INTS4Q96HW7 963 aaKnown RBP9.9□□□□□ -0.82
DDX39B-216ENST00000462421 PRIMPOLQ96LW4 560 aa9.9□□□□□ -0.82
DDX39B-216ENST00000462421 UHRF1Q96T88 793 aaPredicted RBP9.9□□□□□ -0.82
DDX39B-216ENST00000462421 APOL6Q9BWW8 343 aa9.9□□□□□ -0.82
DDX39B-216ENST00000462421 BHMT2Q9H2M3 363 aa9.9□□□□□ -0.82
DDX39B-216ENST00000462421 IGFLR1Q9H665 355 aa9.9□□□□□ -0.82
DDX39B-216ENST00000462421 RSAD1Q9HA92 442 aa9.9□□□□□ -0.82
DDX39B-216ENST00000462421 TYW1Q9NV66 732 aaKnown RBP9.9□□□□□ -0.82
DDX39B-216ENST00000462421 SPG21Q9NZD8 308 aa9.9□□□□□ -0.82
DDX39B-216ENST00000462421 PCDHB6Q9Y5E3 794 aa9.9□□□□□ -0.82
DDX39B-216ENST00000462421 PCDHB2Q9Y5E7 798 aa9.9□□□□□ -0.82
DDX39B-216ENST00000462421 COL4A6Q14031 1691 aa9.9□□□□□ -0.83
DDX39B-216ENST00000462421 MYH9P35579 1960 aaKnown RBP9.89□□□□□ -0.83
DDX39B-216ENST00000462421 EPOPA6NHQ4 379 aa9.89□□□□□ -0.83
DDX39B-216ENST00000462421 TBCAO75347 108 aaKnown RBP9.89□□□□□ -0.83
DDX39B-216ENST00000462421 MED24O75448 989 aa9.89□□□□□ -0.83
DDX39B-216ENST00000462421 CSDE1O75534 798 aaKnown RBP9.89□□□□□ -0.83
DDX39B-216ENST00000462421 FGF18O76093 207 aa9.89□□□□□ -0.83
DDX39B-216ENST00000462421 CYP11B2P19099 503 aa9.89□□□□□ -0.83
DDX39B-216ENST00000462421 SSTR3P32745 418 aaPredicted RBP9.89□□□□□ -0.83
DDX39B-216ENST00000462421 NAMPTP43490 491 aa9.89□□□□□ -0.83
DDX39B-216ENST00000462421 YARSP54577 528 aaKnown RBP9.89□□□□□ -0.83
DDX39B-216ENST00000462421 PTENP60484 403 aa9.89□□□□□ -0.83
DDX39B-216ENST00000462421 PRPF4BQ13523 1007 aaKnown RBP9.89□□□□□ -0.83
DDX39B-216ENST00000462421 GIT2Q14161 759 aa9.89□□□□□ -0.83
DDX39B-216ENST00000462421 DSC3Q14574 896 aa9.89□□□□□ -0.83
DDX39B-216ENST00000462421 NBR1Q14596 966 aa9.89□□□□□ -0.83
DDX39B-216ENST00000462421 SMC1AQ14683 1233 aaKnown RBP9.89□□□□□ -0.83
DDX39B-216ENST00000462421 SLC27A1Q6PCB7 646 aa9.89□□□□□ -0.83
DDX39B-216ENST00000462421 KCNT2Q6UVM3 1135 aa9.89□□□□□ -0.83
DDX39B-216ENST00000462421 RTN4RL1Q86UN2 441 aaPredicted RBP9.89□□□□□ -0.83
DDX39B-216ENST00000462421 CABP7Q86V35 215 aa9.89□□□□□ -0.83
DDX39B-216ENST00000462421 POF1BQ8WVV4 589 aa9.89□□□□□ -0.83
DDX39B-216ENST00000462421 PABPC5Q96DU9 382 aaKnown RBP9.89□□□□□ -0.83
DDX39B-216ENST00000462421 BICD1Q96G01 975 aa9.89□□□□□ -0.83
DDX39B-216ENST00000462421 ZNF396Q96N95 335 aaPredicted RBP9.89□□□□□ -0.83
DDX39B-216ENST00000462421 POP1Q99575 1024 aaKnown RBP9.89□□□□□ -0.83
DDX39B-216ENST00000462421 CDCA3Q99618 268 aaPredicted RBP9.89□□□□□ -0.83
DDX39B-216ENST00000462421 NFKBIZQ9BYH8 718 aa9.89□□□□□ -0.83
DDX39B-216ENST00000462421 OSBPL7Q9BZF2 842 aa9.89□□□□□ -0.83
DDX39B-216ENST00000462421 CSRNP2Q9H175 543 aa9.89□□□□□ -0.83
DDX39B-216ENST00000462421 ZSCAN16Q9H4T2 348 aaPredicted RBP9.89□□□□□ -0.83
DDX39B-216ENST00000462421 TLE6Q9H808 572 aa9.89□□□□□ -0.83
DDX39B-216ENST00000462421 UBE2ZQ9H832 354 aaPredicted RBP9.89□□□□□ -0.83
DDX39B-216ENST00000462421 ALG13Q9NP73 1137 aaKnown RBP9.89□□□□□ -0.83
DDX39B-216ENST00000462421 NGRNQ9NPE2 291 aaKnown RBP9.89□□□□□ -0.83
DDX39B-216ENST00000462421 KCND2Q9NZV8 630 aa9.89□□□□□ -0.83
DDX39B-216ENST00000462421 WRAP73Q9P2S5 460 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms