RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 ANKRD54Q6NXT1 300 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 CCDC62Q6P9F0 684 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 SYCE2Q6PIF2 218 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 ZC3H14Q6PJT7 736 aaKnown RBP6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 TMEM184AQ6ZMB5 413 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 SYNE3Q6ZMZ3 975 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 RUFY3Q7L099 469 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 CATIPQ7Z7H3 387 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 FAM160B2Q86V87 743 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 SERINC5Q86VE9 423 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 HELQQ8TDG4 1101 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 IGDCC4Q8TDY8 1250 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 DCAF4Q8WV16 495 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 GMCL1Q96IK5 515 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 TCEANC2Q96MN5 208 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 PPP1R9BQ96SB3 815 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 MTA3Q9BTC8 594 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 RBCK1Q9BYM8 510 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 LRRC2Q9BYS8 371 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 C22orf23Q9BZE7 217 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 CDV3Q9UKY7 258 aaKnown RBP6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 SLC12A7Q9Y666 1083 aa6.8□□□□□ -1.32
SMARCC1-204ENST00000462198 FRMPD2Q68DX3 1309 aaPredicted RBP6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 PLXNA4Q9HCM2 1894 aa6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 CNOT1A5YKK6 2376 aaKnown RBP6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 PTPDC1A2A3K4 754 aa6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 SOBPA7XYQ1 873 aa6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 HAS3O00219 553 aa6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 SH2B2O14492 632 aaPredicted RBP6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 SCAMP3O14828 347 aaKnown RBP6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 DGKIO75912 1065 aa6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 GH1P01241 217 aa6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 P4HBP07237 508 aaKnown RBP6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 PARP1P09874 1014 aaKnown RBP6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 SP9P0CG40 484 aa6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 PDHBP11177 359 aa6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 CALML3P27482 149 aa6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 EXOSC10Q01780 885 aaKnown RBP6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 ARHGAP1Q07960 439 aa6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 DUSP6Q16828 381 aa6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 PPM1JQ5JR12 505 aa6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 Q6ZUG5 572 aa6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 KCTD1Q719H9 257 aa6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 APBB2Q92870 758 aa6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 MPHOSPH6Q99547 160 aaKnown RBP6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 CDCA3Q99618 268 aaPredicted RBP6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 MKNK1Q9BUB5 465 aa6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 KATNAL1Q9BW62 490 aa6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 PANK2Q9BZ23 570 aa6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 TM6SF1Q9BZW5 370 aa6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 GRPEL1Q9HAV7 217 aa6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 RC3H2Q9HBD1 1191 aaKnown RBP6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 LY9Q9HBG7 655 aa6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 ERVK-5Q9HDB9 667 aa6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 PDRG1Q9NUG6 133 aa6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 NCDNQ9UBB6 729 aa6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 CCPG1Q9ULG6 757 aa6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 MRPL42Q9Y6G3 142 aaKnown RBP6.79□□□□□ -1.32
SMARCC1-204ENST00000462198 CEP295Q9C0D2 2601 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 B4DLN1 442 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 H3BM21 787 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 NFIBO00712 420 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 DHX16O60231 1041 aaKnown RBP6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 PLA2G6O60733 806 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 DDAH1O94760 285 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 GOLGA8HP0CJ92 632 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 SRGAP2BP0DMP2 458 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 CALM1P0DP23 149 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 CALM2P0DP24 149 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 CALM3P0DP25 149 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 HOXB8P17481 243 aaPredicted RBP6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 ERCC5P28715 1186 aaPredicted RBP6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 LIFRP42702 1097 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 GSK3AP49840 483 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 NEK4P51957 841 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 MRPL12P52815 198 aaKnown RBP6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 ERVFC1P60507 584 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 ZNF543Q08ER8 600 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 KCNMA1Q12791 1236 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 KCNC3Q14003 757 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 ASPRV1Q53RT3 343 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 HS1BP3Q53T59 392 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 SEPT14Q6ZU15 432 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 RASGRP2Q7LDG7 609 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 CREBRFQ8IUR6 639 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 ZNF654Q8IZM8 581 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 ZDHHC14Q8IZN3 488 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 TSEN2Q8NCE0 465 aaKnown RBP6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 CTCFLQ8NI51 663 aaPredicted RBP6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 ATP6V0A1Q93050 837 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 MYL10Q9BUA6 226 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 POMKQ9H5K3 350 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 CDH22Q9UJ99 828 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 FBXL21Q9UKT6 434 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 PRR12Q9ULL5 1215 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 KIAA1671Q9BY89 1806 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 ZZEF1O43149 2961 aa6.78□□□□□ -1.32
SMARCC1-204ENST00000462198 KLF18A0A0U1RQI7 1052 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 TREHO43280 583 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 ZBTB43O43298 467 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms