RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 PPARAQ07869 468 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 GBX1Q14549 363 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 MAN2A1Q16706 1144 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 CT83Q5H943 113 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 IGDCC3Q8IVU1 814 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 IFNL2Q8IZJ0 200 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 LINC01356Q8N9X3 169 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 KYQ8NBH2 561 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 SLC16A11Q8NCK7 471 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 OR5AN1Q8NGI8 311 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 SMARCC2Q8TAQ2 1214 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 TGFBRAP1Q8WUH2 860 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 JADE3Q92613 823 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 FATE1Q969F0 183 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 SORCS2Q96PQ0 1159 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 AMNQ9BXJ7 453 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 ANO3Q9BYT9 981 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 SEMA4AQ9H3S1 761 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 IFT122Q9HBG6 1241 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 SLC39A2Q9NP94 309 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 C1orf112Q9NSG2 853 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 POLR3BQ9NW08 1133 aaPredicted RBP3.93□□□□□ -1.78
HDAC6-212ENST00000461608 FTSJ1Q9UET6 329 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 PRSS50Q9UI38 385 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 ZFP69BQ9UJL9 534 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 PCDHA5Q9Y5H7 936 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 HCFC2Q9Y5Z7 792 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 FAM171A2A8MVW0 826 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 PCDHGA12O60330 932 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 ZRANB2O95218 330 aaKnown RBP eCLIP3.92□□□□□ -1.78
HDAC6-212ENST00000461608 CLEC2LP0C7M8 214 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 OSMP13725 252 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 ITGA1P56199 1179 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 LGALS4P56470 323 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 IL13RA1P78552 427 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 PURAQ00577 322 aaKnown RBP3.92□□□□□ -1.78
HDAC6-212ENST00000461608 CAP1Q01518 475 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 MALLQ13021 153 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 RTP5Q14D33 572 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 IFIT1BQ5T764 474 aaKnown RBP3.92□□□□□ -1.78
HDAC6-212ENST00000461608 KANK2Q63ZY3 851 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 TMEM200BQ69YZ2 307 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 GRAMD4Q6IC98 578 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 PPP4R3AQ6IN85 833 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 KLHDC10Q6PID8 442 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 LMBR1LQ6UX01 489 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 TMC5Q6UXY8 1006 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 LIPIQ6XZB0 460 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 MIGA2Q7L4E1 593 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 EPM2AIP1Q7L775 607 aaPredicted RBP3.92□□□□□ -1.78
HDAC6-212ENST00000461608 LDHDQ86WU2 507 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 SLC41A1Q8IVJ1 513 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 CMIPQ8IY22 773 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 THEMISQ8N1K5 641 aaPredicted RBP3.92□□□□□ -1.78
HDAC6-212ENST00000461608 LINC00482Q8N8I6 264 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 TP53I13Q8NBR0 393 aaPredicted RBP3.92□□□□□ -1.78
HDAC6-212ENST00000461608 MZB1Q8WU39 189 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 GAB3Q8WWW8 586 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 FAM193BQ96PV7 902 aaPredicted RBP3.92□□□□□ -1.78
HDAC6-212ENST00000461608 NOL10Q9BSC4 688 aaKnown RBP3.92□□□□□ -1.78
HDAC6-212ENST00000461608 ZNF700Q9H0M5 742 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 KCND1Q9NSA2 647 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 NOB1Q9ULX3 412 aaKnown RBP3.92□□□□□ -1.78
HDAC6-212ENST00000461608 EDARQ9UNE0 448 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 VWA7Q9Y334 891 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 PCDHGA9Q9Y5G4 932 aaKnown RBP3.92□□□□□ -1.78
HDAC6-212ENST00000461608 PCDHGA8Q9Y5G5 932 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 PCDHGA7Q9Y5G6 932 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 PCDHGA6Q9Y5G7 932 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 PCDHGA3Q9Y5H0 932 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 PCDHGA2Q9Y5H1 932 aa3.92□□□□□ -1.78
HDAC6-212ENST00000461608 A0A0G2JNJ9 132 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 LCHNA4D1U4 455 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 VSTM5A8MXK1 200 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 H0Y858 1186 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 SEC24DO94855 1032 aaPredicted RBP3.91□□□□□ -1.78
HDAC6-212ENST00000461608 FSBPO95073 299 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 PCDH8O95206 1070 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 LPLP06858 475 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 LPOP22079 712 aaPredicted RBP3.91□□□□□ -1.78
HDAC6-212ENST00000461608 IGFBP6P24592 240 aaPredicted RBP3.91□□□□□ -1.78
HDAC6-212ENST00000461608 WASP42768 502 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 MAGEA10P43363 369 aaPredicted RBP3.91□□□□□ -1.78
HDAC6-212ENST00000461608 HTRA3P83110 453 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 TCIRG1Q13488 830 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 ODF1Q14990 250 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 MUM1L1Q5H9M0 696 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 C11orf96Q7Z7L8 435 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 C14orf80Q86SX3 495 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 FAM129CQ86XR2 697 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 TPH2Q8IWU9 490 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 REXO1L1PQ8IX06 675 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 UNC5BQ8IZJ1 945 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 TSPEARQ8WU66 669 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 LPPQ93052 612 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 PWWP2AQ96N64 755 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 MAP3K14Q99558 947 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 C11orf84Q9BUA3 381 aaPredicted RBP3.91□□□□□ -1.78
HDAC6-212ENST00000461608 ADI1Q9BV57 179 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 OSBPL6Q9BZF3 934 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms