RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 SFPQP23246 707 aaKnown RBP eCLIP24.84■■□□□ 1.57
C9orf3-209ENST00000460573 CD52P31358 61 aa24.84■■□□□ 1.57
C9orf3-209ENST00000460573 NAMPTP43490 491 aa24.84■■□□□ 1.57
C9orf3-209ENST00000460573 RABGGTBP53611 331 aa24.84■■□□□ 1.57
C9orf3-209ENST00000460573 PTENP60484 403 aa24.84■■□□□ 1.57
C9orf3-209ENST00000460573 CAPSQ13938 189 aa24.84■■□□□ 1.57
C9orf3-209ENST00000460573 PPP2R2DQ66LE6 453 aa24.84■■□□□ 1.57
C9orf3-209ENST00000460573 FSIP1Q8NA03 581 aa24.84■■□□□ 1.57
C9orf3-209ENST00000460573 TMEM87AQ8NBN3 555 aa24.84■■□□□ 1.57
C9orf3-209ENST00000460573 ZNF668Q96K58 619 aaPredicted RBP24.84■■□□□ 1.57
C9orf3-209ENST00000460573 OSBPL7Q9BZF2 842 aa24.84■■□□□ 1.57
C9orf3-209ENST00000460573 SYKP43405 635 aa24.83■■□□□ 1.57
C9orf3-209ENST00000460573 MAPK7Q13164 816 aa24.83■■□□□ 1.57
C9orf3-209ENST00000460573 GIT2Q14161 759 aa24.83■■□□□ 1.57
C9orf3-209ENST00000460573 CEP57L1Q8IYX8 460 aa24.83■■□□□ 1.57
C9orf3-209ENST00000460573 DAW1Q8N136 415 aa24.83■■□□□ 1.57
C9orf3-209ENST00000460573 SLC9A7Q96T83 725 aa24.83■■□□□ 1.57
C9orf3-209ENST00000460573 C2orf40Q9H1Z8 148 aa24.83■■□□□ 1.57
C9orf3-209ENST00000460573 PRDM12Q9H4Q4 367 aa24.83■■□□□ 1.57
C9orf3-209ENST00000460573 ERVK-5Q9HDB9 667 aa24.83■■□□□ 1.57
C9orf3-209ENST00000460573 KBTBD4Q9NVX7 518 aa24.83■■□□□ 1.57
C9orf3-209ENST00000460573 LARSQ9P2J5 1176 aaKnown RBP24.83■■□□□ 1.57
C9orf3-209ENST00000460573 ST3GAL5Q9UNP4 418 aa24.83■■□□□ 1.57
C9orf3-209ENST00000460573 SLFN14P0C7P3 912 aa24.82■■□□□ 1.56
C9orf3-209ENST00000460573 IGFBP4P22692 258 aa24.82■■□□□ 1.56
C9orf3-209ENST00000460573 RAD51AP2Q09MP3 1159 aa24.82■■□□□ 1.56
C9orf3-209ENST00000460573 NFX1Q12986 1120 aaKnown RBP24.82■■□□□ 1.56
C9orf3-209ENST00000460573 DMP1Q13316 513 aaPredicted RBP24.82■■□□□ 1.56
C9orf3-209ENST00000460573 FAM228AQ86W67 206 aa24.82■■□□□ 1.56
C9orf3-209ENST00000460573 ZBTB8OSQ8IWT0 167 aa24.82■■□□□ 1.56
C9orf3-209ENST00000460573 PPM1EQ8WY54 764 aa24.82■■□□□ 1.56
C9orf3-209ENST00000460573 REEP2Q9BRK0 252 aa24.82■■□□□ 1.56
C9orf3-209ENST00000460573 PCDHA11Q9Y5I1 949 aa24.82■■□□□ 1.56
C9orf3-209ENST00000460573 LRRIQ4A6NIV6 560 aa24.81■■□□□ 1.56
C9orf3-209ENST00000460573 PLS3P13797 630 aa24.81■■□□□ 1.56
C9orf3-209ENST00000460573 NDUFA8P51970 172 aa24.81■■□□□ 1.56
C9orf3-209ENST00000460573 CDCA2Q69YH5 1023 aaPredicted RBP24.81■■□□□ 1.56
C9orf3-209ENST00000460573 DEPTORQ8TB45 409 aa24.81■■□□□ 1.56
C9orf3-209ENST00000460573 DDX12PQ92771 950 aa24.81■■□□□ 1.56
C9orf3-209ENST00000460573 NTPCRQ9BSD7 190 aaKnown RBP24.81■■□□□ 1.56
C9orf3-209ENST00000460573 PHLPP2Q6ZVD8 1323 aa24.81■■□□□ 1.56
C9orf3-209ENST00000460573 NPHP3-ACAD11A0A0J9YXS1 232 aa24.8■■□□□ 1.56
C9orf3-209ENST00000460573 MYMKA6NI61 221 aa24.8■■□□□ 1.56
C9orf3-209ENST00000460573 TBCAO75347 108 aaKnown RBP24.8■■□□□ 1.56
C9orf3-209ENST00000460573 FAM13AO94988 1023 aa24.8■■□□□ 1.56
C9orf3-209ENST00000460573 ZNF131P52739 623 aa24.8■■□□□ 1.56
C9orf3-209ENST00000460573 EFNA5P52803 228 aa24.8■■□□□ 1.56
C9orf3-209ENST00000460573 SMTNP53814 917 aa24.8■■□□□ 1.56
C9orf3-209ENST00000460573 SPIRE2Q8WWL2 714 aa24.8■■□□□ 1.56
C9orf3-209ENST00000460573 BSNDQ8WZ55 320 aa24.8■■□□□ 1.56
C9orf3-209ENST00000460573 PARVGQ9HBI0 331 aa24.8■■□□□ 1.56
C9orf3-209ENST00000460573 POLD4Q9HCU8 107 aa24.8■■□□□ 1.56
C9orf3-209ENST00000460573 CHST12Q9NRB3 414 aa24.8■■□□□ 1.56
C9orf3-209ENST00000460573 YBX2Q9Y2T7 364 aaKnown RBP24.8■■□□□ 1.56
C9orf3-209ENST00000460573 H0YCG3 227 aa24.79■■□□□ 1.56
C9orf3-209ENST00000460573 SCP2P22307 547 aa24.79■■□□□ 1.56
C9orf3-209ENST00000460573 NPTX2P47972 431 aa24.79■■□□□ 1.56
C9orf3-209ENST00000460573 PEX3P56589 373 aa24.79■■□□□ 1.56
C9orf3-209ENST00000460573 NCBP1Q09161 790 aaKnown RBP24.79■■□□□ 1.56
C9orf3-209ENST00000460573 CNNM4Q6P4Q7 775 aa24.79■■□□□ 1.56
C9orf3-209ENST00000460573 DYMQ7RTS9 669 aa24.79■■□□□ 1.56
C9orf3-209ENST00000460573 CATSPER4Q7RTX7 472 aa24.79■■□□□ 1.56
C9orf3-209ENST00000460573 CCDC34Q96HJ3 373 aa24.79■■□□□ 1.56
C9orf3-209ENST00000460573 GBP4Q96PP9 640 aa24.79■■□□□ 1.56
C9orf3-209ENST00000460573 GOLPH3LQ9H4A5 285 aa24.79■■□□□ 1.56
C9orf3-209ENST00000460573 SERTAD1Q9UHV2 236 aa24.79■■□□□ 1.56
C9orf3-209ENST00000460573 TET1Q8NFU7 2136 aa24.79■■□□□ 1.56
C9orf3-209ENST00000460573 CCDC169A6NNP5 214 aa24.78■■□□□ 1.56
C9orf3-209ENST00000460573 SFI1A8K8P3 1242 aa24.78■■□□□ 1.56
C9orf3-209ENST00000460573 INO80B-WBP1J3KQ70 363 aa24.78■■□□□ 1.56
C9orf3-209ENST00000460573 ACTN4O43707 911 aaKnown RBP24.78■■□□□ 1.56
C9orf3-209ENST00000460573 ZSCAN20P17040 1043 aaPredicted RBP24.78■■□□□ 1.56
C9orf3-209ENST00000460573 AXLP30530 894 aa24.78■■□□□ 1.56
C9orf3-209ENST00000460573 CACNB1Q02641 598 aaPredicted RBP24.78■■□□□ 1.56
C9orf3-209ENST00000460573 MBTD1Q05BQ5 628 aa24.78■■□□□ 1.56
C9orf3-209ENST00000460573 TCTN1Q2MV58 587 aa24.78■■□□□ 1.56
C9orf3-209ENST00000460573 TPRNQ4KMQ1 711 aa24.78■■□□□ 1.56
C9orf3-209ENST00000460573 PHOSPHO2Q8TCD6 241 aa24.78■■□□□ 1.56
C9orf3-209ENST00000460573 DNAJC19Q96DA6 116 aa24.78■■□□□ 1.56
C9orf3-209ENST00000460573 PRIMPOLQ96LW4 560 aa24.78■■□□□ 1.56
C9orf3-209ENST00000460573 C7orf25Q9BPX7 421 aa24.78■■□□□ 1.56
C9orf3-209ENST00000460573 ZBED2Q9BTP6 218 aa24.78■■□□□ 1.56
C9orf3-209ENST00000460573 MINDY3Q9H8M7 445 aa24.78■■□□□ 1.56
C9orf3-209ENST00000460573 KMT5AQ9NQR1 393 aa24.78■■□□□ 1.56
C9orf3-209ENST00000460573 CSDE1O75534 798 aaKnown RBP24.77■■□□□ 1.56
C9orf3-209ENST00000460573 ERLIN2O94905 339 aa24.77■■□□□ 1.56
C9orf3-209ENST00000460573 ZNF202O95125 648 aa24.77■■□□□ 1.56
C9orf3-209ENST00000460573 MYL1P05976 194 aa24.77■■□□□ 1.56
C9orf3-209ENST00000460573 MYOGP15173 224 aa24.77■■□□□ 1.56
C9orf3-209ENST00000460573 GAP43P17677 238 aa24.77■■□□□ 1.56
C9orf3-209ENST00000460573 FAM187BQ17R55 369 aa24.77■■□□□ 1.56
C9orf3-209ENST00000460573 LONRF3Q496Y0 759 aa24.77■■□□□ 1.56
C9orf3-209ENST00000460573 KANK3Q6NY19 840 aa24.77■■□□□ 1.56
C9orf3-209ENST00000460573 PPP4R3CPQ6ZMV5 832 aa24.77■■□□□ 1.56
C9orf3-209ENST00000460573 MYCT1Q8N699 235 aa24.77■■□□□ 1.56
C9orf3-209ENST00000460573 TRIM9Q9C026 710 aa24.77■■□□□ 1.56
C9orf3-209ENST00000460573 TSPYL2Q9H2G4 693 aaPredicted RBP24.77■■□□□ 1.56
C9orf3-209ENST00000460573 TMX1Q9H3N1 280 aa24.77■■□□□ 1.56
C9orf3-209ENST00000460573 TMEM134Q9H6X4 195 aa24.77■■□□□ 1.56
C9orf3-209ENST00000460573 PRMT7Q9NVM4 692 aaPredicted RBP24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms