RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 NT5DC1Q5TFE4 455 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 CERS3Q8IU89 383 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 RAVER1Q8IY67 606 aaKnown RBP4.47□□□□□ -1.69
VPS8-215ENST00000460158 RTKN2Q8IZC4 609 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 OR14C36Q8NHC7 312 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 RSAD2Q8WXG1 361 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 NKD2Q969F2 451 aaPredicted RBP4.47□□□□□ -1.69
VPS8-215ENST00000460158 RAX2Q96IS3 184 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 WDR92Q96MX6 357 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 SLC2A13Q96QE2 648 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 FDXACB1Q9BRP7 624 aaPredicted RBP4.47□□□□□ -1.69
VPS8-215ENST00000460158 KIAA1683Q9H0B3 1180 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 USP40Q9NVE5 1235 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 MKS1Q9NXB0 559 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 SYNPO2Q9UMS6 1093 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 G3BP2Q9UN86 482 aaKnown RBP4.47□□□□□ -1.69
VPS8-215ENST00000460158 THRAP3Q9Y2W1 955 aaKnown RBP4.47□□□□□ -1.69
VPS8-215ENST00000460158 SPEF1Q9Y4P9 236 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 PCDHGA9Q9Y5G4 932 aaKnown RBP4.47□□□□□ -1.69
VPS8-215ENST00000460158 PCDHGA8Q9Y5G5 932 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 PCDHGA7Q9Y5G6 932 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 PCDHGA6Q9Y5G7 932 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 PCDHGA3Q9Y5H0 932 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 PCDHGA2Q9Y5H1 932 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 CDY2AQ9Y6F7 541 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 HNRNPLP14866 589 aaKnown RBP eCLIP4.46□□□□□ -1.7
VPS8-215ENST00000460158 GPR15P49685 360 aa4.46□□□□□ -1.7
VPS8-215ENST00000460158 MRE11P49959 708 aa4.46□□□□□ -1.7
VPS8-215ENST00000460158 MEOX1P50221 254 aa4.46□□□□□ -1.7
VPS8-215ENST00000460158 GJA9P57773 515 aa4.46□□□□□ -1.7
VPS8-215ENST00000460158 CCT2P78371 535 aaKnown RBP4.46□□□□□ -1.7
VPS8-215ENST00000460158 ADAM15Q13444 863 aa4.46□□□□□ -1.7
VPS8-215ENST00000460158 SPIDRQ14159 915 aa4.46□□□□□ -1.7
VPS8-215ENST00000460158 USP10Q14694 798 aaKnown RBP4.46□□□□□ -1.7
VPS8-215ENST00000460158 ODF1Q14990 250 aa4.46□□□□□ -1.7
VPS8-215ENST00000460158 PCOLCEQ15113 449 aa4.46□□□□□ -1.7
VPS8-215ENST00000460158 ZNF827Q17R98 1081 aa4.46□□□□□ -1.7
VPS8-215ENST00000460158 MUM1Q2TAK8 710 aa4.46□□□□□ -1.7
VPS8-215ENST00000460158 KRTAP5-3Q6L8H2 238 aa4.46□□□□□ -1.7
VPS8-215ENST00000460158 ZBTB46Q86UZ6 589 aa4.46□□□□□ -1.7
VPS8-215ENST00000460158 KBTBD2Q8IY47 623 aa4.46□□□□□ -1.7
VPS8-215ENST00000460158 PPP1R14CQ8TAE6 165 aa4.46□□□□□ -1.7
VPS8-215ENST00000460158 TSPEARQ8WU66 669 aa4.46□□□□□ -1.7
VPS8-215ENST00000460158 AUTS2Q8WXX7 1259 aa4.46□□□□□ -1.7
VPS8-215ENST00000460158 GPR20Q99678 358 aa4.46□□□□□ -1.7
VPS8-215ENST00000460158 BCCIPQ9P287 314 aaKnown RBP eCLIP4.46□□□□□ -1.7
VPS8-215ENST00000460158 KLHL42Q9P2K6 505 aa4.46□□□□□ -1.7
VPS8-215ENST00000460158 GPR45Q9Y5Y3 372 aa4.46□□□□□ -1.7
VPS8-215ENST00000460158 KLHL33A6NCF5 533 aa4.45□□□□□ -1.7
VPS8-215ENST00000460158 XPOTO43592 962 aaKnown RBP4.45□□□□□ -1.7
VPS8-215ENST00000460158 B4GALT3O60512 393 aa4.45□□□□□ -1.7
VPS8-215ENST00000460158 SEC24DO94855 1032 aaPredicted RBP4.45□□□□□ -1.7
VPS8-215ENST00000460158 MTHFD2P13995 350 aa4.45□□□□□ -1.7
VPS8-215ENST00000460158 AGXTP21549 392 aa4.45□□□□□ -1.7
VPS8-215ENST00000460158 XPAP23025 273 aaPredicted RBP4.45□□□□□ -1.7
VPS8-215ENST00000460158 CCND1P24385 295 aa4.45□□□□□ -1.7
VPS8-215ENST00000460158 CD69Q07108 199 aa4.45□□□□□ -1.7
VPS8-215ENST00000460158 MCL1Q07820 350 aa4.45□□□□□ -1.7
VPS8-215ENST00000460158 MGAT5Q09328 741 aa4.45□□□□□ -1.7
VPS8-215ENST00000460158 KIAA2012Q0VF49 1180 aa4.45□□□□□ -1.7
VPS8-215ENST00000460158 PUM1Q14671 1186 aaKnown RBP eCLIP4.45□□□□□ -1.7
VPS8-215ENST00000460158 ACAP2Q15057 778 aa4.45□□□□□ -1.7
VPS8-215ENST00000460158 TBR1Q16650 682 aa4.45□□□□□ -1.7
VPS8-215ENST00000460158 CCDC178Q5BJE1 867 aa4.45□□□□□ -1.7
VPS8-215ENST00000460158 AGBL4Q5VU57 503 aa4.45□□□□□ -1.7
VPS8-215ENST00000460158 KLHDC10Q6PID8 442 aa4.45□□□□□ -1.7
VPS8-215ENST00000460158 RALYLQ86SE5 291 aaKnown RBP4.45□□□□□ -1.7
VPS8-215ENST00000460158 PNMA8AQ86V59 439 aaPredicted RBP4.45□□□□□ -1.7
VPS8-215ENST00000460158 JADE3Q92613 823 aa4.45□□□□□ -1.7
VPS8-215ENST00000460158 CHMP4CQ96CF2 233 aa4.45□□□□□ -1.7
VPS8-215ENST00000460158 HOOK2Q96ED9 719 aa4.45□□□□□ -1.7
VPS8-215ENST00000460158 OSBPL6Q9BZF3 934 aa4.45□□□□□ -1.7
VPS8-215ENST00000460158 SLC13A1Q9BZW2 595 aa4.45□□□□□ -1.7
VPS8-215ENST00000460158 IFT122Q9HBG6 1241 aa4.45□□□□□ -1.7
VPS8-215ENST00000460158 ZNF277Q9NRM2 450 aaPredicted RBP4.45□□□□□ -1.7
VPS8-215ENST00000460158 AASDHPPTQ9NRN7 309 aa4.45□□□□□ -1.7
VPS8-215ENST00000460158 FAM184BQ9ULE4 1060 aa4.45□□□□□ -1.7
VPS8-215ENST00000460158 VWA7Q9Y334 891 aa4.45□□□□□ -1.7
VPS8-215ENST00000460158 C2orf78A6NCI8 922 aa4.44□□□□□ -1.7
VPS8-215ENST00000460158 NRP2O60462 931 aa4.44□□□□□ -1.7
VPS8-215ENST00000460158 B4GALT4O60513 344 aa4.44□□□□□ -1.7
VPS8-215ENST00000460158 LY86O95711 162 aa4.44□□□□□ -1.7
VPS8-215ENST00000460158 MAGEA10P43363 369 aaPredicted RBP4.44□□□□□ -1.7
VPS8-215ENST00000460158 RAB27AP51159 221 aa4.44□□□□□ -1.7
VPS8-215ENST00000460158 KRT85P78386 507 aa4.44□□□□□ -1.7
VPS8-215ENST00000460158 ACAP1Q15027 740 aa4.44□□□□□ -1.7
VPS8-215ENST00000460158 ZMAT1Q5H9K5 638 aa4.44□□□□□ -1.7
VPS8-215ENST00000460158 FAM124AQ86V42 546 aa4.44□□□□□ -1.7
VPS8-215ENST00000460158 GLB1L2Q8IW92 636 aa4.44□□□□□ -1.7
VPS8-215ENST00000460158 PIK3C3Q8NEB9 887 aa4.44□□□□□ -1.7
VPS8-215ENST00000460158 JDP2Q8WYK2 163 aa4.44□□□□□ -1.7
VPS8-215ENST00000460158 GFM2Q969S9 779 aaKnown RBP4.44□□□□□ -1.7
VPS8-215ENST00000460158 ACE2Q9BYF1 805 aaPredicted RBP4.44□□□□□ -1.7
VPS8-215ENST00000460158 OR10A2Q9H208 303 aa4.44□□□□□ -1.7
VPS8-215ENST00000460158 CTDP1Q9Y5B0 961 aaPredicted RBP4.44□□□□□ -1.7
VPS8-215ENST00000460158 MRFAP1Q9Y605 127 aa4.44□□□□□ -1.7
VPS8-215ENST00000460158 DUSP10Q9Y6W6 482 aa4.44□□□□□ -1.7
VPS8-215ENST00000460158 DAPK3O43293 454 aa4.43□□□□□ -1.7
VPS8-215ENST00000460158 AKAP10O43572 662 aa4.43□□□□□ -1.7
VPS8-215ENST00000460158 TMEM127O75204 238 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms