RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 NFIL3Q16649 462 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 PTPROQ16827 1216 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 TNFAIP8L3Q5GJ75 292 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 GPATCH4Q5T3I0 446 aaKnown RBP9.19□□□□□ -0.94
VPS50-208ENST00000458707 RC3H1Q5TC82 1133 aaKnown RBP9.19□□□□□ -0.94
VPS50-208ENST00000458707 TLDC1Q6P9B6 456 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 SFR1Q86XK3 245 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 EXOC8Q8IYI6 725 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 LRRC47Q8N1G4 583 aaKnown RBP9.19□□□□□ -0.94
VPS50-208ENST00000458707 ANKS4BQ8N8V4 417 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 SLC35G2Q8TBE7 412 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 GRAPLQ8TC17 118 aaPredicted RBP9.19□□□□□ -0.94
VPS50-208ENST00000458707 NEK9Q8TD19 979 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 U2AF1L4Q8WU68 220 aaKnown RBP9.19□□□□□ -0.94
VPS50-208ENST00000458707 PSTPIP2Q9H939 334 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 ATP6V0A4Q9HBG4 840 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 GPCPD1Q9NPB8 672 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.19□□□□□ -0.94
VPS50-208ENST00000458707 CNOT7Q9UIV1 285 aaKnown RBP9.19□□□□□ -0.94
VPS50-208ENST00000458707 PNMA2Q9UL42 364 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 ATP8A1Q9Y2Q0 1164 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 NR2E1Q9Y466 385 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 DAAM1Q9Y4D1 1078 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 ADAMTSL1Q8N6G6 1762 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 SMCHD1A6NHR9 2005 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 FRMPD4Q14CM0 1322 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 GOLGA6L10A0A0M3HER8 536 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 BACH1O14867 736 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 KIAA0391O15091 583 aaKnown RBP9.19□□□□□ -0.94
VPS50-208ENST00000458707 TBX3O15119 743 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 EVI5O60447 810 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 EZRP15311 586 aaKnown RBP9.19□□□□□ -0.94
VPS50-208ENST00000458707 RPA1P27694 616 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 GBP1P32455 592 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 NF2P35240 595 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 RFC4P35249 363 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 SOX5P35711 763 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 PMS2P54278 862 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 TCEAL1Q15170 157 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 KIAA1755Q5JYT7 1200 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 POTEEQ6S8J3 1075 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 ZDHHC24Q6UX98 284 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 BTNL9Q6UXG8 535 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 CRELD2Q6UXH1 353 aaPredicted RBP9.19□□□□□ -0.94
VPS50-208ENST00000458707 CATSPER3Q86XQ3 398 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 COL23A1Q86Y22 540 aaPredicted RBP9.19□□□□□ -0.94
VPS50-208ENST00000458707 FMNL3Q8IVF7 1028 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 SLF2Q8IX21 1173 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 ETNPPLQ8TBG4 499 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 MDM1Q8TC05 714 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 MIEF2Q96C03 454 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 REEP2Q9BRK0 252 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 STK33Q9BYT3 514 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 VEZTQ9HBM0 779 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 CD209Q9NNX6 404 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 OSGEPQ9NPF4 335 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 PPP1R9AQ9ULJ8 1098 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 LHX6Q9UPM6 363 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 RPS6KA4O75676 772 aa9.18□□□□□ -0.94
VPS50-208ENST00000458707 AGTP01019 485 aa9.18□□□□□ -0.94
VPS50-208ENST00000458707 SHBGP04278 402 aa9.18□□□□□ -0.94
VPS50-208ENST00000458707 MMEP08473 750 aa9.18□□□□□ -0.94
VPS50-208ENST00000458707 SPATA31C1P0DKV0 1188 aa9.18□□□□□ -0.94
VPS50-208ENST00000458707 AKR1B1P15121 316 aa9.18□□□□□ -0.94
VPS50-208ENST00000458707 HSPA6P17066 643 aa9.18□□□□□ -0.94
VPS50-208ENST00000458707 VCAM1P19320 739 aa9.18□□□□□ -0.94
VPS50-208ENST00000458707 PTGIRP43119 386 aa9.18□□□□□ -0.94
VPS50-208ENST00000458707 CASP4P49662 377 aa9.18□□□□□ -0.94
VPS50-208ENST00000458707 PSMC6P62333 389 aa9.18□□□□□ -0.94
VPS50-208ENST00000458707 MAPK7Q13164 816 aa9.18□□□□□ -0.94
VPS50-208ENST00000458707 DCAF17Q5H9S7 520 aaPredicted RBP9.18□□□□□ -0.94
VPS50-208ENST00000458707 C6orf118Q5T5N4 469 aa9.18□□□□□ -0.94
VPS50-208ENST00000458707 DENND2CQ68D51 928 aa9.18□□□□□ -0.94
VPS50-208ENST00000458707 KCTD17Q8N5Z5 321 aa9.18□□□□□ -0.94
VPS50-208ENST00000458707 ERMNQ8TAM6 284 aa9.18□□□□□ -0.94
VPS50-208ENST00000458707 ERVK-5Q9HDB9 667 aa9.18□□□□□ -0.94
VPS50-208ENST00000458707 OLFML3Q9NRN5 406 aa9.18□□□□□ -0.94
VPS50-208ENST00000458707 GRHL1Q9NZI5 618 aa9.18□□□□□ -0.94
VPS50-208ENST00000458707 PCYOX1Q9UHG3 505 aa9.18□□□□□ -0.94
VPS50-208ENST00000458707 TRPC5Q9UL62 973 aaPredicted RBP9.18□□□□□ -0.94
VPS50-208ENST00000458707 RGPD3A6NKT7 1758 aaPredicted RBP9.18□□□□□ -0.94
VPS50-208ENST00000458707 RGPD4Q7Z3J3 1758 aa9.18□□□□□ -0.94
VPS50-208ENST00000458707 ZMYM2Q9UBW7 1377 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 RPTORQ8N122 1335 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 SYNGAP1Q96PV0 1343 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 IGSF9BQ9UPX0 1349 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 CFAP73A6NFT4 308 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 SPDYE3A6NKU9 549 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 USP17L10C9JJH3 530 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 OPLAHO14841 1288 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 EIF3DO15371 548 aaKnown RBP eCLIP9.17□□□□□ -0.94
VPS50-208ENST00000458707 KCNQ2O43526 872 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 PHF2O75151 1096 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 ATP6V1G2O95670 118 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 FAM163BP0C2L3 166 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 STAT3P40763 770 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 RWDD2BP57060 319 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 ICA1Q05084 483 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 NFIXQ14938 502 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 SLC15A2Q16348 729 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms