RNA–Protein interactions for RNA: ENST00000458642.5

HDAC11-216, Transcript of histone deacetylase 11, humanhuman

TSL 5

Gene HDAC11, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-216ENST00000458642 RDM1Q8NG50 284 aa20.83■□□□□ 0.93
HDAC11-216ENST00000458642 IGSF21Q96ID5 467 aa20.83■□□□□ 0.93
HDAC11-216ENST00000458642 RIPOR3Q96MK2 946 aa20.83■□□□□ 0.93
HDAC11-216ENST00000458642 GBP3Q9H0R5 595 aa20.83■□□□□ 0.93
HDAC11-216ENST00000458642 CHST12Q9NRB3 414 aa20.83■□□□□ 0.93
HDAC11-216ENST00000458642 FAM105AQ9NUU6 356 aa20.83■□□□□ 0.93
HDAC11-216ENST00000458642 WRAP73Q9P2S5 460 aaPredicted RBP20.83■□□□□ 0.93
HDAC11-216ENST00000458642 OFD1O75665 1012 aa20.82■□□□□ 0.92
HDAC11-216ENST00000458642 GALTP07902 379 aa20.82■□□□□ 0.92
HDAC11-216ENST00000458642 SLC11A1P49279 550 aa20.82■□□□□ 0.92
HDAC11-216ENST00000458642 ITIH3Q06033 890 aa20.82■□□□□ 0.92
HDAC11-216ENST00000458642 SSRP1Q08945 709 aaKnown RBP20.82■□□□□ 0.92
HDAC11-216ENST00000458642 STK3Q13188 491 aa20.82■□□□□ 0.92
HDAC11-216ENST00000458642 INF2Q27J81 1249 aa20.82■□□□□ 0.92
HDAC11-216ENST00000458642 NOMO2Q5JPE7 1267 aa20.82■□□□□ 0.92
HDAC11-216ENST00000458642 RUFY3Q7L099 469 aa20.82■□□□□ 0.92
HDAC11-216ENST00000458642 SLC22A17Q8WUG5 538 aa20.82■□□□□ 0.92
HDAC11-216ENST00000458642 TRAIPQ9BWF2 469 aa20.82■□□□□ 0.92
HDAC11-216ENST00000458642 IFT122Q9HBG6 1241 aa20.82■□□□□ 0.92
HDAC11-216ENST00000458642 BMP2KQ9NSY1 1161 aaPredicted RBP20.82■□□□□ 0.92
HDAC11-216ENST00000458642 KCNJ14Q9UNX9 436 aa20.82■□□□□ 0.92
HDAC11-216ENST00000458642 NR2E1Q9Y466 385 aa20.82■□□□□ 0.92
HDAC11-216ENST00000458642 H0Y858 1186 aa20.81■□□□□ 0.92
HDAC11-216ENST00000458642 CTSAP10619 480 aa20.81■□□□□ 0.92
HDAC11-216ENST00000458642 PSMA5P28066 241 aa20.81■□□□□ 0.92
HDAC11-216ENST00000458642 DNM2P50570 870 aa20.81■□□□□ 0.92
HDAC11-216ENST00000458642 GLB1LQ6UWU2 654 aa20.81■□□□□ 0.92
HDAC11-216ENST00000458642 CATSPER4Q7RTX7 472 aa20.81■□□□□ 0.92
HDAC11-216ENST00000458642 DDX53Q86TM3 631 aaKnown RBP20.81■□□□□ 0.92
HDAC11-216ENST00000458642 ZNF410Q86VK4 478 aa20.81■□□□□ 0.92
HDAC11-216ENST00000458642 PRRX2Q99811 253 aa20.81■□□□□ 0.92
HDAC11-216ENST00000458642 MINDY3Q9H8M7 445 aa20.81■□□□□ 0.92
HDAC11-216ENST00000458642 DDX25Q9UHL0 483 aaKnown RBP20.81■□□□□ 0.92
HDAC11-216ENST00000458642 VAV3Q9UKW4 847 aa20.81■□□□□ 0.92
HDAC11-216ENST00000458642 SORCS3Q9UPU3 1222 aa20.81■□□□□ 0.92
HDAC11-216ENST00000458642 DENND4AQ7Z401 1863 aa20.81■□□□□ 0.92
HDAC11-216ENST00000458642 CACNA1HO95180 2353 aa20.8■□□□□ 0.92
HDAC11-216ENST00000458642 PLXNA3P51805 1871 aa20.8■□□□□ 0.92
HDAC11-216ENST00000458642 MTMR3Q13615 1198 aa20.8■□□□□ 0.92
HDAC11-216ENST00000458642 TMC5Q6UXY8 1006 aa20.8■□□□□ 0.92
HDAC11-216ENST00000458642 AGMOQ6ZNB7 445 aa20.8■□□□□ 0.92
HDAC11-216ENST00000458642 TRIM22Q8IYM9 498 aa20.8■□□□□ 0.92
HDAC11-216ENST00000458642 TMEM105Q8N8V8 129 aa20.8■□□□□ 0.92
HDAC11-216ENST00000458642 DAGLBQ8NCG7 672 aa20.8■□□□□ 0.92
HDAC11-216ENST00000458642 NECTIN4Q96NY8 510 aa20.8■□□□□ 0.92
HDAC11-216ENST00000458642 ZSWIM6Q9HCJ5 1215 aa20.8■□□□□ 0.92
HDAC11-216ENST00000458642 GJB4Q9NTQ9 266 aa20.8■□□□□ 0.92
HDAC11-216ENST00000458642 LIMD1Q9UGP4 676 aa20.8■□□□□ 0.92
HDAC11-216ENST00000458642 DDHD2O94830 711 aa20.79■□□□□ 0.92
HDAC11-216ENST00000458642 DEXIO95424 95 aa20.79■□□□□ 0.92
HDAC11-216ENST00000458642 SSBP05455 408 aaKnown RBP eCLIP20.79■□□□□ 0.92
HDAC11-216ENST00000458642 MTHFRP42898 656 aa20.79■□□□□ 0.92
HDAC11-216ENST00000458642 PSMC5P62195 406 aa20.79■□□□□ 0.92
HDAC11-216ENST00000458642 RNASELQ05823 741 aaKnown RBP20.79■□□□□ 0.92
HDAC11-216ENST00000458642 PTPN14Q15678 1187 aa20.79■□□□□ 0.92
HDAC11-216ENST00000458642 LETM2Q2VYF4 491 aa20.79■□□□□ 0.92
HDAC11-216ENST00000458642 KIAA1841Q6NSI8 718 aa20.79■□□□□ 0.92
HDAC11-216ENST00000458642 ATOH1Q92858 354 aaPredicted RBP20.79■□□□□ 0.92
HDAC11-216ENST00000458642 TMEM143Q96AN5 459 aa20.79■□□□□ 0.92
HDAC11-216ENST00000458642 CYP26B1Q9NR63 512 aa20.79■□□□□ 0.92
HDAC11-216ENST00000458642 AGPAT5Q9NUQ2 364 aa20.79■□□□□ 0.92
HDAC11-216ENST00000458642 PCDHB2Q9Y5E7 798 aa20.79■□□□□ 0.92
HDAC11-216ENST00000458642 IRAK3Q9Y616 596 aa20.79■□□□□ 0.92
HDAC11-216ENST00000458642 ZFHX2Q9C0A1 2572 aaPredicted RBP20.78■□□□□ 0.92
HDAC11-216ENST00000458642 ZNF623O75123 536 aa20.78■□□□□ 0.92
HDAC11-216ENST00000458642 POLGP54098 1239 aaPredicted RBP20.78■□□□□ 0.92
HDAC11-216ENST00000458642 CDC42EP1Q00587 391 aa20.78■□□□□ 0.92
HDAC11-216ENST00000458642 NONOQ15233 471 aaKnown RBP eCLIP20.78■□□□□ 0.92
HDAC11-216ENST00000458642 UBXN11Q5T124 520 aa20.78■□□□□ 0.92
HDAC11-216ENST00000458642 TDRD5Q8NAT2 981 aaKnown RBP20.78■□□□□ 0.92
HDAC11-216ENST00000458642 PRPF31Q8WWY3 499 aaKnown RBP20.78■□□□□ 0.92
HDAC11-216ENST00000458642 C22orf23Q9BZE7 217 aa20.78■□□□□ 0.92
HDAC11-216ENST00000458642 DBR1Q9UK59 544 aaKnown RBP20.78■□□□□ 0.92
HDAC11-216ENST00000458642 COL4A3BPQ9Y5P4 624 aa20.78■□□□□ 0.92
HDAC11-216ENST00000458642 VPS13AQ96RL7 3174 aa20.78■□□□□ 0.92
HDAC11-216ENST00000458642 CPLX1O14810 134 aa20.77■□□□□ 0.92
HDAC11-216ENST00000458642 ZBTB39O15060 712 aa20.77■□□□□ 0.92
HDAC11-216ENST00000458642 GFRA3O60609 400 aa20.77■□□□□ 0.92
HDAC11-216ENST00000458642 SRGAP2CP0DJJ0 459 aa20.77■□□□□ 0.92
HDAC11-216ENST00000458642 HOXA11P31270 313 aaPredicted RBP20.77■□□□□ 0.92
HDAC11-216ENST00000458642 MOXD1Q6UVY6 613 aa20.77■□□□□ 0.92
HDAC11-216ENST00000458642 UBALD2Q8IYN6 164 aa20.77■□□□□ 0.92
HDAC11-216ENST00000458642 TMEM87AQ8NBN3 555 aa20.77■□□□□ 0.92
HDAC11-216ENST00000458642 INO80BQ9C086 356 aaPredicted RBP20.77■□□□□ 0.92
HDAC11-216ENST00000458642 KCNMB3Q9NPA1 279 aa20.77■□□□□ 0.92
HDAC11-216ENST00000458642 DZANK1Q9NVP4 752 aa20.77■□□□□ 0.92
HDAC11-216ENST00000458642 C2orf16Q68DN1 1984 aa20.77■□□□□ 0.92
HDAC11-216ENST00000458642 REC8O95072 547 aa20.76■□□□□ 0.91
HDAC11-216ENST00000458642 POMCP01189 267 aa20.76■□□□□ 0.91
HDAC11-216ENST00000458642 SKIP12755 728 aa20.76■□□□□ 0.91
HDAC11-216ENST00000458642 QARSP47897 775 aaKnown RBP20.76■□□□□ 0.91
HDAC11-216ENST00000458642 RAB27AP51159 221 aa20.76■□□□□ 0.91
HDAC11-216ENST00000458642 PPP2R5CQ13362 524 aa20.76■□□□□ 0.91
HDAC11-216ENST00000458642 ATAT1Q5SQI0 421 aa20.76■□□□□ 0.91
HDAC11-216ENST00000458642 CABP7Q86V35 215 aa20.76■□□□□ 0.91
HDAC11-216ENST00000458642 OXER1Q8TDS5 423 aa20.76■□□□□ 0.91
HDAC11-216ENST00000458642 HAS1Q92839 578 aa20.76■□□□□ 0.91
HDAC11-216ENST00000458642 ZNF274Q96GC6 653 aaPredicted RBP20.76■□□□□ 0.91
HDAC11-216ENST00000458642 CEP170P1Q96L14 293 aa20.76■□□□□ 0.91
HDAC11-216ENST00000458642 KLHL5Q96PQ7 755 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms