RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 CCL14Q16627 93 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 MAN2A1Q16706 1144 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 FKBP15Q5T1M5 1219 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 DMRTA1Q5VZB9 504 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 SPECC1LQ69YQ0 1117 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 APTXQ7Z2E3 356 aaKnown RBP9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 FRMD5Q7Z6J6 570 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 IRF2BP1Q8IU81 584 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 VSTM4Q8IW00 320 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 NELFCDQ8IXH7 590 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 SYCP3Q8IZU3 236 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 CCDC150Q8NCX0 1101 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 TMEM161BQ8NDZ6 487 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 GLIS3Q8NEA6 775 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 PSPC1Q8WXF1 523 aaKnown RBP9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 TUBGCP2Q9BSJ2 902 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 C16orf70Q9BSU1 422 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 FGFBP2Q9BYJ0 223 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 UPF3AQ9H1J1 476 aaKnown RBP9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 C2orf40Q9H1Z8 148 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 TUT1Q9H6E5 874 aaKnown RBP9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 TELO2Q9Y4R8 837 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 ZMYM2Q9UBW7 1377 aa9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 CCDC169A6NNP5 214 aa9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 SFI1A8K8P3 1242 aa9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 ZBTB42B2RXF5 422 aa9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 GPR25O00155 361 aa9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 MSCO60682 206 aa9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 FKTNO75072 461 aa9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 TRPA1O75762 1119 aa9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 PRPF6O94906 941 aaKnown RBP9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 TBC1D8O95759 1140 aa9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 HMGCRP04035 888 aa9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 RPLP2P05387 115 aaKnown RBP9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 TPM1P09493 284 aa9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 EPB41P11171 864 aaKnown RBP9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 HOXD13P35453 343 aa9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 MTIF2P46199 727 aaKnown RBP9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 PRKCZQ05513 592 aa9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 STRN3Q13033 797 aa9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 ADAM9Q13443 819 aa9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 CCDC40Q4G0X9 1142 aa9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 ADGRD1Q6QNK2 874 aa9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 TRIM50Q86XT4 487 aa9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 DEPTORQ8TB45 409 aa9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 TRIB2Q92519 343 aa9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 NFKBIZQ9BYH8 718 aa9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 TMEM134Q9H6X4 195 aa9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 GPRC5CQ9NQ84 441 aa9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 AGPAT3Q9NRZ7 376 aa9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 TBX20Q9UMR3 447 aa9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 FRMD4BQ9Y2L6 1034 aa9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 NRCAMQ92823 1304 aa9.78□□□□□ -0.84
CDC42EP3-204ENST00000457889 DENND3A2RUS2 1198 aa9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 ARHGAP33O14559 1287 aa9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 SLC16A4O15374 487 aa9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 DYNC1LI2O43237 492 aaPredicted RBP9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 TGFB1I1O43294 461 aa9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 ADCY3O60266 1144 aa9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 C22orf31O95567 290 aa9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 PIGRP01833 764 aa9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 RARBP10826 455 aa9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 INSRRP14616 1297 aa9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 GARTP22102 1010 aa9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 GLRA2P23416 452 aa9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 MARK3P27448 753 aa9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 PSMC2P35998 433 aaKnown RBP9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 PBX1P40424 430 aa9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 GJA9P57773 515 aa9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 PPFIA1Q13136 1202 aa9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 PCBP1Q15365 356 aaKnown RBP eCLIP9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 FSCN1Q16658 493 aaKnown RBP9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 ZC2HC1CQ53FD0 456 aaPredicted RBP9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 GJC2Q5T442 439 aaPredicted RBP9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 MAP3K21Q5TCX8 1036 aa9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 CDCA2Q69YH5 1023 aaPredicted RBP9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 SLFN12LQ6IEE8 588 aa9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 MAEAQ7L5Y9 396 aa9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 USP37Q86T82 979 aa9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 TRIM59Q8IWR1 403 aa9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 ZBTB8OSQ8IWT0 167 aa9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 NAP1L5Q96NT1 182 aaPredicted RBP9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 BEGAINQ9BUH8 593 aa9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 NOC4LQ9BVI4 516 aaKnown RBP9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 ARHGAP39Q9C0H5 1083 aa9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 KIAA1586Q9HCI6 787 aa9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 INTS13Q9NVM9 706 aa9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 DMAC2Q9NW81 257 aa9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 ARMCX3Q9UH62 379 aaPredicted RBP9.77□□□□□ -0.85
CDC42EP3-204ENST00000457889 LRRIQ4A6NIV6 560 aa9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 HAS3O00219 553 aa9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 ADCY6O43306 1168 aa9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 ZNF286BP0CG31 522 aa9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 GNAT1P11488 350 aa9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 SFPQP23246 707 aaKnown RBP eCLIP9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 CST5P28325 142 aaPredicted RBP9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 MCCD1P59942 119 aaPredicted RBP9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 GRIK4Q16099 956 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms