RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 C2orf40Q9H1Z8 148 aa25.69■■□□□ 1.7
CBX3-204ENST00000456948 C5orf67F2Z3F1 127 aa25.68■■□□□ 1.7
CBX3-204ENST00000456948 EYA4O95677 639 aa25.68■■□□□ 1.7
CBX3-204ENST00000456948 GLRA2P23416 452 aa25.68■■□□□ 1.7
CBX3-204ENST00000456948 SKIV2LQ15477 1246 aaKnown RBP25.68■■□□□ 1.7
CBX3-204ENST00000456948 IFNLR1Q8IU57 520 aaPredicted RBP25.68■■□□□ 1.7
CBX3-204ENST00000456948 ASAP3Q8TDY4 903 aa25.68■■□□□ 1.7
CBX3-204ENST00000456948 KIFAP3Q92845 792 aa25.68■■□□□ 1.7
CBX3-204ENST00000456948 CCDC51Q96ER9 411 aa25.68■■□□□ 1.7
CBX3-204ENST00000456948 CALML4Q96GE6 196 aa25.68■■□□□ 1.7
CBX3-204ENST00000456948 LMAN2LQ9H0V9 348 aa25.68■■□□□ 1.7
CBX3-204ENST00000456948 KCNG1Q9UIX4 513 aa25.68■■□□□ 1.7
CBX3-204ENST00000456948 MRPL42Q9Y6G3 142 aaKnown RBP25.68■■□□□ 1.7
CBX3-204ENST00000456948 LRRIQ4A6NIV6 560 aa25.67■■□□□ 1.7
CBX3-204ENST00000456948 LPXNO60711 386 aa25.67■■□□□ 1.7
CBX3-204ENST00000456948 LONP1P36776 959 aaKnown RBP25.67■■□□□ 1.7
CBX3-204ENST00000456948 CAPSQ13938 189 aa25.67■■□□□ 1.7
CBX3-204ENST00000456948 RALGAPA2Q2PPJ7 1873 aa25.67■■□□□ 1.7
CBX3-204ENST00000456948 CNNM3Q8NE01 707 aa25.67■■□□□ 1.7
CBX3-204ENST00000456948 RASSF8Q8NHQ8 419 aa25.67■■□□□ 1.7
CBX3-204ENST00000456948 P2RX5Q93086 422 aa25.67■■□□□ 1.7
CBX3-204ENST00000456948 COL25A1Q9BXS0 654 aaPredicted RBP25.67■■□□□ 1.7
CBX3-204ENST00000456948 MRPL9Q9BYD2 267 aaKnown RBP25.67■■□□□ 1.7
CBX3-204ENST00000456948 FAM105AQ9NUU6 356 aa25.67■■□□□ 1.7
CBX3-204ENST00000456948 DAXXQ9UER7 740 aaPredicted RBP25.67■■□□□ 1.7
CBX3-204ENST00000456948 PRRC2BQ5JSZ5 2229 aaKnown RBP25.67■■□□□ 1.7
CBX3-204ENST00000456948 CARNS1A5YM72 827 aa25.66■■□□□ 1.7
CBX3-204ENST00000456948 PP2D1A8MPX8 630 aa25.66■■□□□ 1.7
CBX3-204ENST00000456948 ZNF623O75123 536 aa25.66■■□□□ 1.7
CBX3-204ENST00000456948 CDC25AP30304 524 aa25.66■■□□□ 1.7
CBX3-204ENST00000456948 ECM1Q16610 540 aa25.66■■□□□ 1.7
CBX3-204ENST00000456948 NOTUMQ6P988 496 aa25.66■■□□□ 1.7
CBX3-204ENST00000456948 HACE1Q8IYU2 909 aa25.66■■□□□ 1.7
CBX3-204ENST00000456948 MRPL38Q96DV4 380 aaKnown RBP25.66■■□□□ 1.7
CBX3-204ENST00000456948 TIPINQ9BVW5 301 aa25.66■■□□□ 1.7
CBX3-204ENST00000456948 MTMR6Q9Y217 621 aa25.66■■□□□ 1.7
CBX3-204ENST00000456948 FGFR1P11362 822 aa25.65■■□□□ 1.7
CBX3-204ENST00000456948 RESTQ13127 1097 aa25.65■■□□□ 1.7
CBX3-204ENST00000456948 CABP7Q86V35 215 aa25.65■■□□□ 1.7
CBX3-204ENST00000456948 LRRC43Q8N309 656 aa25.65■■□□□ 1.7
CBX3-204ENST00000456948 DEPTORQ8TB45 409 aa25.65■■□□□ 1.7
CBX3-204ENST00000456948 MINDY3Q9H8M7 445 aa25.65■■□□□ 1.7
CBX3-204ENST00000456948 GPRC5CQ9NQ84 441 aa25.65■■□□□ 1.7
CBX3-204ENST00000456948 NLRC5Q86WI3 1866 aa25.65■■□□□ 1.7
CBX3-204ENST00000456948 E9PMD0 336 aa25.64■■□□□ 1.7
CBX3-204ENST00000456948 LAG3P18627 525 aa25.64■■□□□ 1.7
CBX3-204ENST00000456948 NAMPTP43490 491 aa25.64■■□□□ 1.7
CBX3-204ENST00000456948 GATMP50440 423 aa25.64■■□□□ 1.7
CBX3-204ENST00000456948 TIGD5Q53EQ6 642 aa25.64■■□□□ 1.7
CBX3-204ENST00000456948 HYIQ5T013 277 aa25.64■■□□□ 1.7
CBX3-204ENST00000456948 GLB1LQ6UWU2 654 aa25.64■■□□□ 1.7
CBX3-204ENST00000456948 ZNF598Q86UK7 904 aaKnown RBP25.64■■□□□ 1.7
CBX3-204ENST00000456948 PRIMPOLQ96LW4 560 aa25.64■■□□□ 1.7
CBX3-204ENST00000456948 DRC1Q96MC2 740 aa25.64■■□□□ 1.7
CBX3-204ENST00000456948 TRIM6Q9C030 488 aaPredicted RBP25.64■■□□□ 1.7
CBX3-204ENST00000456948 UBN1Q9NPG3 1134 aa25.64■■□□□ 1.7
CBX3-204ENST00000456948 PRMT7Q9NVM4 692 aaPredicted RBP25.64■■□□□ 1.7
CBX3-204ENST00000456948 PCDHB2Q9Y5E7 798 aa25.64■■□□□ 1.7
CBX3-204ENST00000456948 SSBP05455 408 aaKnown RBP eCLIP25.63■■□□□ 1.69
CBX3-204ENST00000456948 EFNA5P52803 228 aa25.63■■□□□ 1.69
CBX3-204ENST00000456948 MBTD1Q05BQ5 628 aa25.63■■□□□ 1.69
CBX3-204ENST00000456948 TMEM132AQ24JP5 1023 aa25.63■■□□□ 1.69
CBX3-204ENST00000456948 CASD1Q96PB1 797 aa25.63■■□□□ 1.69
CBX3-204ENST00000456948 MMTAG2Q9BU76 263 aaKnown RBP25.63■■□□□ 1.69
CBX3-204ENST00000456948 TYW1Q9NV66 732 aaKnown RBP25.63■■□□□ 1.69
CBX3-204ENST00000456948 KCND2Q9NZV8 630 aa25.63■■□□□ 1.69
CBX3-204ENST00000456948 PHLPP2Q6ZVD8 1323 aa25.63■■□□□ 1.69
CBX3-204ENST00000456948 TSPAN1O60635 241 aa25.62■■□□□ 1.69
CBX3-204ENST00000456948 HOXA11P31270 313 aaPredicted RBP25.62■■□□□ 1.69
CBX3-204ENST00000456948 MAPK6Q16659 721 aa25.62■■□□□ 1.69
CBX3-204ENST00000456948 AAK1Q2M2I8 961 aa25.62■■□□□ 1.69
CBX3-204ENST00000456948 URGCPQ8TCY9 931 aa25.62■■□□□ 1.69
CBX3-204ENST00000456948 PPP2R3CQ969Q6 453 aa25.62■■□□□ 1.69
CBX3-204ENST00000456948 ZNF396Q96N95 335 aaPredicted RBP25.62■■□□□ 1.69
CBX3-204ENST00000456948 C17orf75Q9HAS0 396 aa25.62■■□□□ 1.69
CBX3-204ENST00000456948 THEGQ9P2T0 379 aa25.62■■□□□ 1.69
CBX3-204ENST00000456948 FNDC1Q4ZHG4 1894 aaPredicted RBP25.62■■□□□ 1.69
CBX3-204ENST00000456948 CNTNAP2Q9UHC6 1331 aa25.62■■□□□ 1.69
CBX3-204ENST00000456948 TRANK1O15050 2925 aa25.61■■□□□ 1.69
CBX3-204ENST00000456948 TXLNAP40222 546 aa25.61■■□□□ 1.69
CBX3-204ENST00000456948 HELQQ8TDG4 1101 aa25.61■■□□□ 1.69
CBX3-204ENST00000456948 CSRNP2Q9H175 543 aa25.61■■□□□ 1.69
CBX3-204ENST00000456948 KANSL3Q9P2N6 904 aa25.61■■□□□ 1.69
CBX3-204ENST00000456948 PUF60Q9UHX1 559 aaKnown RBP25.61■■□□□ 1.69
CBX3-204ENST00000456948 COG5Q9UP83 839 aa25.61■■□□□ 1.69
CBX3-204ENST00000456948 PLAGL2Q9UPG8 496 aa25.61■■□□□ 1.69
CBX3-204ENST00000456948 CLIC4Q9Y696 253 aa25.61■■□□□ 1.69
CBX3-204ENST00000456948 LINC00271P0C7V0 271 aa25.6■■□□□ 1.69
CBX3-204ENST00000456948 PPM1AP35813 382 aa25.6■■□□□ 1.69
CBX3-204ENST00000456948 UBE3AQ05086 875 aa25.6■■□□□ 1.69
CBX3-204ENST00000456948 DMP1Q13316 513 aaPredicted RBP25.6■■□□□ 1.69
CBX3-204ENST00000456948 CDCA2Q69YH5 1023 aaPredicted RBP25.6■■□□□ 1.69
CBX3-204ENST00000456948 RINT1Q6NUQ1 792 aa25.6■■□□□ 1.69
CBX3-204ENST00000456948 APBB1IPQ7Z5R6 666 aaPredicted RBP25.6■■□□□ 1.69
CBX3-204ENST00000456948 MRPL10Q7Z7H8 261 aaKnown RBP25.6■■□□□ 1.69
CBX3-204ENST00000456948 THNSL1Q8IYQ7 743 aa25.6■■□□□ 1.69
CBX3-204ENST00000456948 SYT2Q8N9I0 419 aaPredicted RBP25.6■■□□□ 1.69
CBX3-204ENST00000456948 KLHL23Q8NBE8 558 aa25.6■■□□□ 1.69
CBX3-204ENST00000456948 ATXN2LQ8WWM7 1075 aaKnown RBP25.6■■□□□ 1.69
CBX3-204ENST00000456948 CCDC39Q9UFE4 941 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 243.6 ms