RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 TMC7Q7Z402 723 aa14.46□□□□□ -0.09
TREX1-203ENST00000456089 TMEM173Q86WV6 379 aaPredicted RBP14.46□□□□□ -0.09
TREX1-203ENST00000456089 SLFN12Q8IYM2 578 aa14.46□□□□□ -0.09
TREX1-203ENST00000456089 AUTS2Q8WXX7 1259 aa14.46□□□□□ -0.09
TREX1-203ENST00000456089 TMEM143Q96AN5 459 aa14.46□□□□□ -0.09
TREX1-203ENST00000456089 RPGRIP1Q96KN7 1286 aa14.46□□□□□ -0.09
TREX1-203ENST00000456089 CYP26B1Q9NR63 512 aa14.46□□□□□ -0.09
TREX1-203ENST00000456089 SPG21Q9NZD8 308 aa14.46□□□□□ -0.09
TREX1-203ENST00000456089 INPP5FQ9Y2H2 1132 aa14.46□□□□□ -0.09
TREX1-203ENST00000456089 MUC6Q6W4X9 2439 aa14.45□□□□□ -0.1
TREX1-203ENST00000456089 TBX3O15119 743 aa14.45□□□□□ -0.1
TREX1-203ENST00000456089 DKC1O60832 514 aaKnown RBP eCLIP14.45□□□□□ -0.1
TREX1-203ENST00000456089 ZC3H11AO75152 810 aaKnown RBP eCLIP14.45□□□□□ -0.1
TREX1-203ENST00000456089 EOMESO95936 686 aa14.45□□□□□ -0.1
TREX1-203ENST00000456089 SRGAP2CP0DJJ0 459 aa14.45□□□□□ -0.1
TREX1-203ENST00000456089 SFPQP23246 707 aaKnown RBP eCLIP14.45□□□□□ -0.1
TREX1-203ENST00000456089 QARSP47897 775 aaKnown RBP14.45□□□□□ -0.1
TREX1-203ENST00000456089 CYP4A11Q02928 519 aa14.45□□□□□ -0.1
TREX1-203ENST00000456089 ST3GAL1Q11201 340 aa14.45□□□□□ -0.1
TREX1-203ENST00000456089 CTTNQ14247 550 aaKnown RBP14.45□□□□□ -0.1
TREX1-203ENST00000456089 CATSPER4Q7RTX7 472 aa14.45□□□□□ -0.1
TREX1-203ENST00000456089 SLC39A11Q8N1S5 342 aa14.45□□□□□ -0.1
TREX1-203ENST00000456089 DYDC2Q96IM9 177 aa14.45□□□□□ -0.1
TREX1-203ENST00000456089 CEP170P1Q96L14 293 aa14.45□□□□□ -0.1
TREX1-203ENST00000456089 LXNQ9BS40 222 aa14.45□□□□□ -0.1
TREX1-203ENST00000456089 GBP3Q9H0R5 595 aa14.45□□□□□ -0.1
TREX1-203ENST00000456089 MINDY3Q9H8M7 445 aa14.45□□□□□ -0.1
TREX1-203ENST00000456089 IFT122Q9HBG6 1241 aa14.45□□□□□ -0.1
TREX1-203ENST00000456089 DACT1Q9NYF0 836 aa14.45□□□□□ -0.1
TREX1-203ENST00000456089 PUF60Q9UHX1 559 aaKnown RBP14.45□□□□□ -0.1
TREX1-203ENST00000456089 LZTS1Q9Y250 596 aa14.45□□□□□ -0.1
TREX1-203ENST00000456089 ZNF318Q5VUA4 2279 aa14.45□□□□□ -0.1
TREX1-203ENST00000456089 KMT2EQ8IZD2 1858 aa14.44□□□□□ -0.1
TREX1-203ENST00000456089 C2orf16Q68DN1 1984 aa14.44□□□□□ -0.1
TREX1-203ENST00000456089 LOC730098B7Z3J9 87 aa14.44□□□□□ -0.1
TREX1-203ENST00000456089 WNT7AO00755 349 aa14.44□□□□□ -0.1
TREX1-203ENST00000456089 B4GALT3O60512 393 aa14.44□□□□□ -0.1
TREX1-203ENST00000456089 P4HBP07237 508 aaKnown RBP14.44□□□□□ -0.1
TREX1-203ENST00000456089 ATP2B1P20020 1258 aa14.44□□□□□ -0.1
TREX1-203ENST00000456089 POLGP54098 1239 aaPredicted RBP14.44□□□□□ -0.1
TREX1-203ENST00000456089 KRT17Q04695 432 aa14.44□□□□□ -0.1
TREX1-203ENST00000456089 KCNC3Q14003 757 aa14.44□□□□□ -0.1
TREX1-203ENST00000456089 CALCRLQ16602 461 aa14.44□□□□□ -0.1
TREX1-203ENST00000456089 HERC4Q5GLZ8 1057 aaPredicted RBP14.44□□□□□ -0.1
TREX1-203ENST00000456089 ANKRD54Q6NXT1 300 aa14.44□□□□□ -0.1
TREX1-203ENST00000456089 SYCE2Q6PIF2 218 aa14.44□□□□□ -0.1
TREX1-203ENST00000456089 FAM43BQ6ZT52 329 aaPredicted RBP14.44□□□□□ -0.1
TREX1-203ENST00000456089 ZNF410Q86VK4 478 aa14.44□□□□□ -0.1
TREX1-203ENST00000456089 ZNF710Q8N1W2 664 aa14.44□□□□□ -0.1
TREX1-203ENST00000456089 BCL7CQ8WUZ0 217 aaPredicted RBP14.44□□□□□ -0.1
TREX1-203ENST00000456089 PRPF31Q8WWY3 499 aaKnown RBP14.44□□□□□ -0.1
TREX1-203ENST00000456089 TBC1D32Q96NH3 1257 aa14.44□□□□□ -0.1
TREX1-203ENST00000456089 CDCA3Q99618 268 aaPredicted RBP14.44□□□□□ -0.1
TREX1-203ENST00000456089 S1PR5Q9H228 398 aa14.44□□□□□ -0.1
TREX1-203ENST00000456089 FAM105AQ9NUU6 356 aa14.44□□□□□ -0.1
TREX1-203ENST00000456089 COL4A3BPQ9Y5P4 624 aa14.44□□□□□ -0.1
TREX1-203ENST00000456089 PLXNA3P51805 1871 aa14.44□□□□□ -0.1
TREX1-203ENST00000456089 A0A087WWV3 80 aa14.43□□□□□ -0.1
TREX1-203ENST00000456089 C2orf71A6NGG8 1288 aa14.43□□□□□ -0.1
TREX1-203ENST00000456089 WEE2P0C1S8 567 aa14.43□□□□□ -0.1
TREX1-203ENST00000456089 PPM1AP35813 382 aa14.43□□□□□ -0.1
TREX1-203ENST00000456089 AFF1P51825 1210 aaKnown RBP14.43□□□□□ -0.1
TREX1-203ENST00000456089 SPIRE1Q08AE8 756 aa14.43□□□□□ -0.1
TREX1-203ENST00000456089 PDE12Q6L8Q7 609 aaKnown RBP14.43□□□□□ -0.1
TREX1-203ENST00000456089 KANK3Q6NY19 840 aa14.43□□□□□ -0.1
TREX1-203ENST00000456089 FEZF2Q8TBJ5 459 aa14.43□□□□□ -0.1
TREX1-203ENST00000456089 SUSD6Q92537 303 aa14.43□□□□□ -0.1
TREX1-203ENST00000456089 PHF7Q9BWX1 381 aaPredicted RBP14.43□□□□□ -0.1
TREX1-203ENST00000456089 NRDE2Q9H7Z3 1164 aa14.43□□□□□ -0.1
TREX1-203ENST00000456089 NGRNQ9NPE2 291 aaKnown RBP14.43□□□□□ -0.1
TREX1-203ENST00000456089 CHST12Q9NRB3 414 aa14.43□□□□□ -0.1
TREX1-203ENST00000456089 TBC1D13Q9NVG8 400 aa14.43□□□□□ -0.1
TREX1-203ENST00000456089 DNAJB4Q9UDY4 337 aa14.43□□□□□ -0.1
TREX1-203ENST00000456089 NEMFO60524 1076 aa14.42□□□□□ -0.1
TREX1-203ENST00000456089 OFD1O75665 1012 aa14.42□□□□□ -0.1
TREX1-203ENST00000456089 CXCL14O95715 111 aa14.42□□□□□ -0.1
TREX1-203ENST00000456089 YWHABP31946 246 aaKnown RBP14.42□□□□□ -0.1
TREX1-203ENST00000456089 ALDH7A1P49419 539 aaKnown RBP14.42□□□□□ -0.1
TREX1-203ENST00000456089 CDC42EP1Q00587 391 aa14.42□□□□□ -0.1
TREX1-203ENST00000456089 LAMTOR4Q0VGL1 99 aa14.42□□□□□ -0.1
TREX1-203ENST00000456089 SMC1AQ14683 1233 aaKnown RBP14.42□□□□□ -0.1
TREX1-203ENST00000456089 EMC2Q15006 297 aa14.42□□□□□ -0.1
TREX1-203ENST00000456089 EPHA7Q15375 998 aa14.42□□□□□ -0.1
TREX1-203ENST00000456089 XKR9Q5GH70 373 aa14.42□□□□□ -0.1
TREX1-203ENST00000456089 NOMO2Q5JPE7 1267 aa14.42□□□□□ -0.1
TREX1-203ENST00000456089 ZNF280BQ86YH2 543 aa14.42□□□□□ -0.1
TREX1-203ENST00000456089 TPH2Q8IWU9 490 aa14.42□□□□□ -0.1
TREX1-203ENST00000456089 VPS52Q8N1B4 723 aa14.42□□□□□ -0.1
TREX1-203ENST00000456089 C12orf76Q8N812 135 aaPredicted RBP14.42□□□□□ -0.1
TREX1-203ENST00000456089 FBXO18Q8NFZ0 1043 aa14.42□□□□□ -0.1
TREX1-203ENST00000456089 SLC7A3Q8WY07 619 aa14.42□□□□□ -0.1
TREX1-203ENST00000456089 TNFRSF25Q93038 417 aa14.42□□□□□ -0.1
TREX1-203ENST00000456089 TMEM169Q96HH4 297 aa14.42□□□□□ -0.1
TREX1-203ENST00000456089 TMX3Q96JJ7 454 aa14.42□□□□□ -0.1
TREX1-203ENST00000456089 MRPL9Q9BYD2 267 aaKnown RBP14.42□□□□□ -0.1
TREX1-203ENST00000456089 FOXP1Q9H334 677 aaPredicted RBP14.42□□□□□ -0.1
TREX1-203ENST00000456089 DHX33Q9H6R0 707 aaKnown RBP14.42□□□□□ -0.1
TREX1-203ENST00000456089 NOL7Q9UMY1 257 aaKnown RBP14.42□□□□□ -0.1
TREX1-203ENST00000456089 PCDHA12Q9UN75 941 aa14.42□□□□□ -0.1
TREX1-203ENST00000456089 PCDHB2Q9Y5E7 798 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms