RNA–Protein interactions for RNA: ENST00000455656.1

TMEM56-202, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-202ENST00000455656 KCNK18Q7Z418 384 aa13.17□□□□□ -0.3
TMEM56-202ENST00000455656 MRPL10Q7Z7H8 261 aaKnown RBP13.17□□□□□ -0.3
TMEM56-202ENST00000455656 KLHL23Q8NBE8 558 aa13.17□□□□□ -0.3
TMEM56-202ENST00000455656 LPPQ93052 612 aa13.17□□□□□ -0.3
TMEM56-202ENST00000455656 INTS4Q96HW7 963 aaKnown RBP13.17□□□□□ -0.3
TMEM56-202ENST00000455656 ASB2Q96Q27 587 aa13.17□□□□□ -0.3
TMEM56-202ENST00000455656 NFKBIZQ9BYH8 718 aa13.17□□□□□ -0.3
TMEM56-202ENST00000455656 LMAN2LQ9H0V9 348 aa13.17□□□□□ -0.3
TMEM56-202ENST00000455656 FAM105AQ9NUU6 356 aa13.17□□□□□ -0.3
TMEM56-202ENST00000455656 RNF216Q9NWF9 866 aaPredicted RBP13.17□□□□□ -0.3
TMEM56-202ENST00000455656 MYH11P35749 1972 aa13.17□□□□□ -0.3
TMEM56-202ENST00000455656 TDRD15B5MCY1 1934 aaKnown RBP13.17□□□□□ -0.3
TMEM56-202ENST00000455656 K7ELQ4 463 aaPredicted RBP13.16□□□□□ -0.3
TMEM56-202ENST00000455656 CYP11B2P19099 503 aa13.16□□□□□ -0.3
TMEM56-202ENST00000455656 IRS1P35568 1242 aa13.16□□□□□ -0.3
TMEM56-202ENST00000455656 CCT6AP40227 531 aaKnown RBP13.16□□□□□ -0.3
TMEM56-202ENST00000455656 PTPROQ16827 1216 aa13.16□□□□□ -0.3
TMEM56-202ENST00000455656 TCEAL5Q5H9L2 206 aa13.16□□□□□ -0.3
TMEM56-202ENST00000455656 TJAP1Q5JTD0 557 aa13.16□□□□□ -0.3
TMEM56-202ENST00000455656 HYIQ5T013 277 aa13.16□□□□□ -0.3
TMEM56-202ENST00000455656 CDCA2Q69YH5 1023 aaPredicted RBP13.16□□□□□ -0.3
TMEM56-202ENST00000455656 TWF2Q6IBS0 349 aaKnown RBP13.16□□□□□ -0.3
TMEM56-202ENST00000455656 PADI6Q6TGC4 694 aa13.16□□□□□ -0.3
TMEM56-202ENST00000455656 MAEAQ7L5Y9 396 aa13.16□□□□□ -0.3
TMEM56-202ENST00000455656 COLGALT1Q8NBJ5 622 aa13.16□□□□□ -0.3
TMEM56-202ENST00000455656 HELQQ8TDG4 1101 aa13.16□□□□□ -0.3
TMEM56-202ENST00000455656 SNX29Q8TEQ0 813 aa13.16□□□□□ -0.3
TMEM56-202ENST00000455656 PNMA5Q96PV4 448 aa13.16□□□□□ -0.3
TMEM56-202ENST00000455656 DDX19AQ9NUU7 478 aaKnown RBP13.16□□□□□ -0.3
TMEM56-202ENST00000455656 KIAA1024Q9UPX6 916 aa13.16□□□□□ -0.3
TMEM56-202ENST00000455656 E9PMD0 336 aa13.15□□□□□ -0.3
TMEM56-202ENST00000455656 DLL1O00548 723 aa13.15□□□□□ -0.3
TMEM56-202ENST00000455656 HOXA2O43364 376 aa13.15□□□□□ -0.3
TMEM56-202ENST00000455656 EDN1P05305 212 aa13.15□□□□□ -0.3
TMEM56-202ENST00000455656 BMP1P13497 986 aa13.15□□□□□ -0.3
TMEM56-202ENST00000455656 SYT1P21579 422 aa13.15□□□□□ -0.3
TMEM56-202ENST00000455656 KCNQ1P51787 676 aa13.15□□□□□ -0.3
TMEM56-202ENST00000455656 AFF1P51825 1210 aaKnown RBP13.15□□□□□ -0.3
TMEM56-202ENST00000455656 MRPS5P82675 430 aaKnown RBP13.15□□□□□ -0.3
TMEM56-202ENST00000455656 GRIN1Q05586 938 aa13.15□□□□□ -0.3
TMEM56-202ENST00000455656 RESTQ13127 1097 aa13.15□□□□□ -0.3
TMEM56-202ENST00000455656 TIGD5Q53EQ6 642 aa13.15□□□□□ -0.3
TMEM56-202ENST00000455656 ARL6IP4Q66PJ3 421 aaKnown RBP13.15□□□□□ -0.3
TMEM56-202ENST00000455656 DTHD1Q6ZMT9 781 aa13.15□□□□□ -0.3
TMEM56-202ENST00000455656 AGMOQ6ZNB7 445 aa13.15□□□□□ -0.3
TMEM56-202ENST00000455656 BRAPQ7Z569 592 aa13.15□□□□□ -0.3
TMEM56-202ENST00000455656 RNF169Q8NCN4 708 aa13.15□□□□□ -0.3
TMEM56-202ENST00000455656 SMG8Q8ND04 991 aaKnown RBP13.15□□□□□ -0.3
TMEM56-202ENST00000455656 MCPH1Q8NEM0 835 aa13.15□□□□□ -0.3
TMEM56-202ENST00000455656 LRRC15Q8TF66 581 aa13.15□□□□□ -0.3
TMEM56-202ENST00000455656 POF1BQ8WVV4 589 aa13.15□□□□□ -0.3
TMEM56-202ENST00000455656 SNX21Q969T3 373 aa13.15□□□□□ -0.3
TMEM56-202ENST00000455656 EIF2AQ9BY44 585 aaKnown RBP13.15□□□□□ -0.3
TMEM56-202ENST00000455656 BHMT2Q9H2M3 363 aa13.15□□□□□ -0.3
TMEM56-202ENST00000455656 NSUN3Q9H649 340 aaKnown RBP13.15□□□□□ -0.3
TMEM56-202ENST00000455656 POLD4Q9HCU8 107 aa13.15□□□□□ -0.3
TMEM56-202ENST00000455656 COG5Q9UP83 839 aa13.15□□□□□ -0.3
TMEM56-202ENST00000455656 ARHGEF35A5YM69 484 aa13.14□□□□□ -0.31
TMEM56-202ENST00000455656 TTLL13PA6NNM8 815 aa13.14□□□□□ -0.31
TMEM56-202ENST00000455656 B4GALT5O43286 388 aa13.14□□□□□ -0.31
TMEM56-202ENST00000455656 B4GALT3O60512 393 aa13.14□□□□□ -0.31
TMEM56-202ENST00000455656 OFD1O75665 1012 aa13.14□□□□□ -0.31
TMEM56-202ENST00000455656 EYA4O95677 639 aa13.14□□□□□ -0.31
TMEM56-202ENST00000455656 ARF4P18085 180 aaPredicted RBP13.14□□□□□ -0.31
TMEM56-202ENST00000455656 AXLP30530 894 aa13.14□□□□□ -0.31
TMEM56-202ENST00000455656 PBX3P40426 434 aa13.14□□□□□ -0.31
TMEM56-202ENST00000455656 RAB27AP51159 221 aa13.14□□□□□ -0.31
TMEM56-202ENST00000455656 HYAL1Q12794 435 aa13.14□□□□□ -0.31
TMEM56-202ENST00000455656 TFDP1Q14186 410 aa13.14□□□□□ -0.31
TMEM56-202ENST00000455656 PCBP1Q15365 356 aaKnown RBP eCLIP13.14□□□□□ -0.31
TMEM56-202ENST00000455656 SKIV2LQ15477 1246 aaKnown RBP13.14□□□□□ -0.31
TMEM56-202ENST00000455656 CTC1Q2NKJ3 1217 aa13.14□□□□□ -0.31
TMEM56-202ENST00000455656 LONRF3Q496Y0 759 aa13.14□□□□□ -0.31
TMEM56-202ENST00000455656 PPP4R3CPQ6ZMV5 832 aa13.14□□□□□ -0.31
TMEM56-202ENST00000455656 ADGRD2Q7Z7M1 963 aa13.14□□□□□ -0.31
TMEM56-202ENST00000455656 DAW1Q8N136 415 aa13.14□□□□□ -0.31
TMEM56-202ENST00000455656 LRRC43Q8N309 656 aa13.14□□□□□ -0.31
TMEM56-202ENST00000455656 HLA-CQ95604 372 aa13.14□□□□□ -0.31
TMEM56-202ENST00000455656 CPB2Q96IY4 423 aa13.14□□□□□ -0.31
TMEM56-202ENST00000455656 CCDC43Q96MW1 224 aaKnown RBP13.14□□□□□ -0.31
TMEM56-202ENST00000455656 RAB34Q9BZG1 259 aa13.14□□□□□ -0.31
TMEM56-202ENST00000455656 CCDC113Q9H0I3 377 aa13.14□□□□□ -0.31
TMEM56-202ENST00000455656 UBE2ZQ9H832 354 aaPredicted RBP13.14□□□□□ -0.31
TMEM56-202ENST00000455656 MTMR6Q9Y217 621 aa13.14□□□□□ -0.31
TMEM56-202ENST00000455656 PCDHB2Q9Y5E7 798 aa13.14□□□□□ -0.31
TMEM56-202ENST00000455656 PCDHGC5Q9Y5F6 944 aa13.14□□□□□ -0.31
TMEM56-202ENST00000455656 STK24Q9Y6E0 443 aa13.14□□□□□ -0.31
TMEM56-202ENST00000455656 VPS37CA5D8V6 355 aaPredicted RBP13.13□□□□□ -0.31
TMEM56-202ENST00000455656 VWA3AA6NCI4 1184 aa13.13□□□□□ -0.31
TMEM56-202ENST00000455656 INO80B-WBP1J3KQ70 363 aa13.13□□□□□ -0.31
TMEM56-202ENST00000455656 FSCN2O14926 492 aa13.13□□□□□ -0.31
TMEM56-202ENST00000455656 FGF18O76093 207 aa13.13□□□□□ -0.31
TMEM56-202ENST00000455656 SKIP12755 728 aa13.13□□□□□ -0.31
TMEM56-202ENST00000455656 LAG3P18627 525 aa13.13□□□□□ -0.31
TMEM56-202ENST00000455656 NCLP19338 710 aaKnown RBP13.13□□□□□ -0.31
TMEM56-202ENST00000455656 GTF2F1P35269 517 aaKnown RBP eCLIP13.13□□□□□ -0.31
TMEM56-202ENST00000455656 LTBRP36941 435 aa13.13□□□□□ -0.31
TMEM56-202ENST00000455656 PLCB3Q01970 1234 aa13.13□□□□□ -0.31
TMEM56-202ENST00000455656 MAPK7Q13164 816 aa13.13□□□□□ -0.31
TMEM56-202ENST00000455656 PTPAQ15257 358 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms