RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 MYO10Q9HD67 2058 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 SMCO2A6NFE2 343 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 SPDYE3A6NKU9 549 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 DDX39AO00148 427 aaKnown RBP5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 ENPP3O14638 875 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 KHNYNO15037 678 aaKnown RBP5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 CSPG5O95196 566 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 CALM1P0DP23 149 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 CALM2P0DP24 149 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 CALM3P0DP25 149 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 ARP10275 920 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 GHRP10912 638 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 GNAT1P11488 350 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 INSRRP14616 1297 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 ZNF16P17020 682 aaPredicted RBP5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 IBSPP21815 317 aaPredicted RBP5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 CDC27P30260 824 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 HTRA4P83105 476 aaPredicted RBP5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 EXOSC10Q01780 885 aaKnown RBP5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 EHHADHQ08426 723 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 PPFIA1Q13136 1202 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 ORC1Q13415 861 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 MTMR1Q13613 665 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 EPC2Q52LR7 807 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 EFHC2Q5JST6 749 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 MARCH8Q5T0T0 291 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 IER5Q5VY09 327 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 WWC2Q6AWC2 1192 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 EP400NLQ6ZTU2 488 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 TMTC3Q6ZXV5 915 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 TRMT1LQ7Z2T5 733 aaKnown RBP5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 KRT25Q7Z3Z0 450 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 RTN4RL1Q86UN2 441 aaPredicted RBP5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 TRAPPC12Q8WVT3 735 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 GLG1Q92896 1179 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 GPRASP2Q96D09 838 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 YME1L1Q96TA2 773 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 SENP7Q9BQF6 1050 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 MXRA8Q9BRK3 442 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 FAM49AQ9H0Q0 323 aaPredicted RBP5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 NUCKS1Q9H1E3 243 aaKnown RBP5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 JADE2Q9NQC1 790 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 KCNH7Q9NS40 1196 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 RNF19AQ9NV58 838 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 NAP1L2Q9ULW6 460 aaPredicted RBP5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 COG5Q9UP83 839 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 UBIAD1Q9Y5Z9 338 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 GPC6Q9Y625 555 aaPredicted RBP5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 EMSYQ7Z589 1322 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 NRCAMQ92823 1304 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 CHD7Q9P2D1 2997 aa5.36□□□□□ -1.55
GTF3C3-208ENST00000455546 CNTNAP5Q8WYK1 1306 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 CDC14CA4D256 554 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 ATXN7O15265 892 aaPredicted RBP5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 EFCAB14O75071 495 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 PCSK2P16519 638 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 KCNA5P22460 613 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 CD52P31358 61 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 NAPAP54920 295 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 MGAT3Q09327 533 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 APOBRQ0VD83 1088 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 SFSWAPQ12872 951 aaKnown RBP5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 GPM6BQ13491 265 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 LPIN1Q14693 890 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 GRIK4Q16099 956 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 DBN1Q16643 649 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 AAK1Q2M2I8 961 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 JAKMIP3Q5VZ66 844 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 XRRA1Q6P2D8 792 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 APOA5Q6Q788 366 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 SYNE3Q6ZMZ3 975 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 DHX32Q7L7V1 743 aaKnown RBP5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 SGMS1Q86VZ5 419 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 TMEM192Q8IY95 271 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 GIMAP8Q8ND71 665 aaPredicted RBP5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 TTC16Q8NEE8 873 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 PIK3R5Q8WYR1 880 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 MTA3Q9BTC8 594 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 IFIH1Q9BYX4 1025 aaKnown RBP5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 SMARCAD1Q9H4L7 1026 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 EHMT1Q9H9B1 1298 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 AGO3Q9H9G7 860 aaKnown RBP5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 RIC8AQ9NPQ8 531 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 ERAP1Q9NZ08 941 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 LMCD1Q9NZU5 365 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 SLC9A2Q9UBY0 812 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 FOXD3Q9UJU5 478 aaPredicted RBP5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 ZNF215Q9UL58 517 aaPredicted RBP5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 KCNMB2Q9Y691 235 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 CDY2AQ9Y6F7 541 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 REV3LO60673 3130 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 MUC3AQ02505 3323 aa5.35□□□□□ -1.55
GTF3C3-208ENST00000455546 FNDC1Q4ZHG4 1894 aaPredicted RBP5.34□□□□□ -1.55
GTF3C3-208ENST00000455546 SPTBN5Q9NRC6 3674 aaKnown RBP5.34□□□□□ -1.55
GTF3C3-208ENST00000455546 KLF18A0A0U1RQI7 1052 aa5.34□□□□□ -1.55
GTF3C3-208ENST00000455546 MBLAC1A4D2B0 266 aaPredicted RBP5.34□□□□□ -1.55
GTF3C3-208ENST00000455546 FAM86C2PA6NEL3 165 aa5.34□□□□□ -1.55
GTF3C3-208ENST00000455546 GOLGA8AA7E2F4 631 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms