RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 SAMD3Q8N6K7 520 aa4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 PJA1Q8NG27 643 aa4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 DIS3LQ8TF46 1054 aaKnown RBP4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 GAB3Q8WWW8 586 aa4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 FATE1Q969F0 183 aa4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 DDX11Q96FC9 970 aa4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 FAM193BQ96PV7 902 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 KRTAP4-2Q9BYR5 136 aa4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 MAN1C1Q9NR34 630 aa4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 KCND1Q9NSA2 647 aa4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 FTSJ1Q9UET6 329 aa4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 EVLQ9UI08 416 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 IPPQ9Y573 584 aa4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 PCDHA5Q9Y5H7 936 aa4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 A0A0A6YYK5 440 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 ANO9A1A5B4 782 aa4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 PEX10O60683 326 aa4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 CTNND1O60716 968 aaKnown RBP4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 HRGP04196 525 aa4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 ATF2P15336 505 aa4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 SLC16A1P53985 500 aa4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 USP14P54578 494 aa4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 ITGA1P56199 1179 aa4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 PPARAQ07869 468 aa4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 ADAM9Q13443 819 aa4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 BIRC2Q13490 618 aa4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 TARBP2Q15633 366 aaKnown RBP4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 KCNA10Q16322 511 aa4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 BTNL9Q6UXG8 535 aa4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 DPP8Q6V1X1 898 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 KSR2Q6VAB6 950 aa4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 GAREM2Q75VX8 874 aa4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 LDHDQ86WU2 507 aa4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 ZSCAN18Q8TBC5 510 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 C1GALT1C1Q96EU7 318 aa4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 MVB12AQ96EY5 273 aa4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 RPS6KC1Q96S38 1066 aa4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 ACO2Q99798 780 aaKnown RBP4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 NOL10Q9BSC4 688 aaKnown RBP4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 SOX7Q9BT81 388 aa4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 ACE2Q9BYF1 805 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 ARHGAP20Q9P2F6 1191 aa4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 LIMCH1Q9UPQ0 1083 aa4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 SMG5Q9UPR3 1016 aaKnown RBP4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 DNM3Q9UQ16 869 aa4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 NACADO15069 1562 aa4.81□□□□□ -1.64
HMGB1P15-201ENST00000453854 FRMPD2Q68DX3 1309 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 MYOCOSA0A1B0GUC4 107 aa4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 A6NNZ2 444 aa4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 H3BML4 177 aa4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 HTRA2O43464 458 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 CHGBP05060 677 aa4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 CYP2C8P10632 490 aa4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 GLDCP23378 1020 aa4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 MCAMP43121 646 aa4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 FXR1P51114 621 aaKnown RBP eCLIP4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 SRSF3P84103 164 aaKnown RBP4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 CDK17Q00537 523 aa4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 RTP5Q14D33 572 aa4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 HSP90AB4PQ58FF6 505 aa4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 SYCP2LQ5T4T6 812 aa4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 SRGAP1Q7Z6B7 1085 aa4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 SIAH1Q8IUQ4 282 aa4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 BCL6BQ8N143 479 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 PPM1NQ8N819 430 aa4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 LINC00482Q8N8I6 264 aa4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 TTC17Q96AE7 1141 aa4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 HIST1H2AHQ96KK5 128 aa4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 MAP3K14Q99558 947 aa4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 HIST1H2AJQ99878 128 aa4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 FDXACB1Q9BRP7 624 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 MCOLN1Q9GZU1 580 aa4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 GREM2Q9H772 168 aa4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 CNTD2Q9H8S5 307 aa4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 SAP30BPQ9UHR5 308 aaKnown RBP4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 USP18Q9UMW8 372 aa4.8□□□□□ -1.64
HMGB1P15-201ENST00000453854 NRP2O60462 931 aa4.79□□□□□ -1.64
HMGB1P15-201ENST00000453854 ZBED1O96006 694 aa4.79□□□□□ -1.64
HMGB1P15-201ENST00000453854 MC3RP41968 323 aa4.79□□□□□ -1.64
HMGB1P15-201ENST00000453854 ANTXR2P58335 489 aa4.79□□□□□ -1.64
HMGB1P15-201ENST00000453854 CD83Q01151 205 aa4.79□□□□□ -1.64
HMGB1P15-201ENST00000453854 PPP3CAQ08209 521 aa4.79□□□□□ -1.64
HMGB1P15-201ENST00000453854 DGKDQ16760 1214 aa4.79□□□□□ -1.64
HMGB1P15-201ENST00000453854 PGS1Q32NB8 556 aa4.79□□□□□ -1.64
HMGB1P15-201ENST00000453854 UAP1L1Q3KQV9 507 aa4.79□□□□□ -1.64
HMGB1P15-201ENST00000453854 MUM1L1Q5H9M0 696 aa4.79□□□□□ -1.64
HMGB1P15-201ENST00000453854 TMEM200BQ69YZ2 307 aa4.79□□□□□ -1.64
HMGB1P15-201ENST00000453854 OVCH2Q7RTZ1 564 aa4.79□□□□□ -1.64
HMGB1P15-201ENST00000453854 ZNF605Q86T29 641 aa4.79□□□□□ -1.64
HMGB1P15-201ENST00000453854 OR5AN1Q8NGI8 311 aa4.79□□□□□ -1.64
HMGB1P15-201ENST00000453854 SMARCC2Q8TAQ2 1214 aa4.79□□□□□ -1.64
HMGB1P15-201ENST00000453854 KCNN1Q92952 543 aa4.79□□□□□ -1.64
HMGB1P15-201ENST00000453854 PAWRQ96IZ0 340 aaKnown RBP4.79□□□□□ -1.64
HMGB1P15-201ENST00000453854 WRNIP1Q96S55 665 aa4.79□□□□□ -1.64
HMGB1P15-201ENST00000453854 SYT3Q9BQG1 590 aa4.79□□□□□ -1.64
HMGB1P15-201ENST00000453854 GORASP1Q9BQQ3 440 aa4.79□□□□□ -1.64
HMGB1P15-201ENST00000453854 TACO1Q9BSH4 297 aaKnown RBP4.79□□□□□ -1.64
HMGB1P15-201ENST00000453854 C11orf84Q9BUA3 381 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms