RNA–Protein interactions for RNA: ENST00000451405.1

RPUSD3-209, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-209ENST00000451405 NLRP4Q96MN2 994 aa18.38■□□□□ 0.53
RPUSD3-209ENST00000451405 LXNQ9BS40 222 aa18.38■□□□□ 0.53
RPUSD3-209ENST00000451405 DHX33Q9H6R0 707 aaKnown RBP18.38■□□□□ 0.53
RPUSD3-209ENST00000451405 TLE6Q9H808 572 aa18.38■□□□□ 0.53
RPUSD3-209ENST00000451405 IFT122Q9HBG6 1241 aa18.38■□□□□ 0.53
RPUSD3-209ENST00000451405 TLR9Q9NR96 1032 aa18.38■□□□□ 0.53
RPUSD3-209ENST00000451405 BMP2KQ9NSY1 1161 aaPredicted RBP18.38■□□□□ 0.53
RPUSD3-209ENST00000451405 CFAP54Q96N23 3096 aa18.38■□□□□ 0.53
RPUSD3-209ENST00000451405 FSCN2O14926 492 aa18.37■□□□□ 0.53
RPUSD3-209ENST00000451405 DKC1O60832 514 aaKnown RBP eCLIP18.37■□□□□ 0.53
RPUSD3-209ENST00000451405 BAG4O95429 457 aaKnown RBP18.37■□□□□ 0.53
RPUSD3-209ENST00000451405 AVPR2P30518 371 aa18.37■□□□□ 0.53
RPUSD3-209ENST00000451405 YWHABP31946 246 aaKnown RBP18.37■□□□□ 0.53
RPUSD3-209ENST00000451405 PHKA2P46019 1235 aa18.37■□□□□ 0.53
RPUSD3-209ENST00000451405 PLCB3Q01970 1234 aa18.37■□□□□ 0.53
RPUSD3-209ENST00000451405 CYP4A11Q02928 519 aa18.37■□□□□ 0.53
RPUSD3-209ENST00000451405 COASYQ13057 564 aa18.37■□□□□ 0.53
RPUSD3-209ENST00000451405 DIS3L2Q8IYB7 885 aaKnown RBP18.37■□□□□ 0.53
RPUSD3-209ENST00000451405 SLFN12Q8IYM2 578 aa18.37■□□□□ 0.53
RPUSD3-209ENST00000451405 ABI1Q8IZP0 508 aa18.37■□□□□ 0.53
RPUSD3-209ENST00000451405 SMRP1Q8NCR6 262 aa18.37■□□□□ 0.53
RPUSD3-209ENST00000451405 MRPS27Q92552 414 aaKnown RBP18.37■□□□□ 0.53
RPUSD3-209ENST00000451405 LPPQ93052 612 aa18.37■□□□□ 0.53
RPUSD3-209ENST00000451405 JPH2Q9BR39 696 aaPredicted RBP18.37■□□□□ 0.53
RPUSD3-209ENST00000451405 PHF7Q9BWX1 381 aaPredicted RBP18.37■□□□□ 0.53
RPUSD3-209ENST00000451405 MINDY3Q9H8M7 445 aa18.37■□□□□ 0.53
RPUSD3-209ENST00000451405 BRMS1Q9HCU9 246 aa18.37■□□□□ 0.53
RPUSD3-209ENST00000451405 DACT1Q9NYF0 836 aa18.37■□□□□ 0.53
RPUSD3-209ENST00000451405 BARX2Q9UMQ3 279 aaPredicted RBP18.37■□□□□ 0.53
RPUSD3-209ENST00000451405 USP15Q9Y4E8 981 aaPredicted RBP18.37■□□□□ 0.53
RPUSD3-209ENST00000451405 MEIS3P2A8K0S8 358 aa18.36■□□□□ 0.53
RPUSD3-209ENST00000451405 SRGAP2CP0DJJ0 459 aa18.36■□□□□ 0.53
RPUSD3-209ENST00000451405 SFPQP23246 707 aaKnown RBP eCLIP18.36■□□□□ 0.53
RPUSD3-209ENST00000451405 VCPP55072 806 aaKnown RBP18.36■□□□□ 0.53
RPUSD3-209ENST00000451405 GUCY1B3Q02153 619 aa18.36■□□□□ 0.53
RPUSD3-209ENST00000451405 CBX2Q14781 532 aaPredicted RBP18.36■□□□□ 0.53
RPUSD3-209ENST00000451405 ZBTB33Q86T24 672 aa18.36■□□□□ 0.53
RPUSD3-209ENST00000451405 TPH2Q8IWU9 490 aa18.36■□□□□ 0.53
RPUSD3-209ENST00000451405 LRRC43Q8N309 656 aa18.36■□□□□ 0.53
RPUSD3-209ENST00000451405 VN1R2Q8NFZ6 395 aa18.36■□□□□ 0.53
RPUSD3-209ENST00000451405 SLC7A3Q8WY07 619 aa18.36■□□□□ 0.53
RPUSD3-209ENST00000451405 ZNF558Q96NG5 402 aa18.36■□□□□ 0.53
RPUSD3-209ENST00000451405 EIF2AK1Q9BQI3 630 aaKnown RBP18.36■□□□□ 0.53
RPUSD3-209ENST00000451405 TRAIPQ9BWF2 469 aa18.36■□□□□ 0.53
RPUSD3-209ENST00000451405 INO80BQ9C086 356 aaPredicted RBP18.36■□□□□ 0.53
RPUSD3-209ENST00000451405 ZSWIM4Q9H7M6 989 aa18.36■□□□□ 0.53
RPUSD3-209ENST00000451405 PCDHA12Q9UN75 941 aa18.36■□□□□ 0.53
RPUSD3-209ENST00000451405 PIN4Q9Y237 131 aaKnown RBP18.36■□□□□ 0.53
RPUSD3-209ENST00000451405 COL4A3BPQ9Y5P4 624 aa18.36■□□□□ 0.53
RPUSD3-209ENST00000451405 A0A087WWV3 80 aa18.35■□□□□ 0.53
RPUSD3-209ENST00000451405 NT5C1B-RDH14C9J2C7 533 aa18.35■□□□□ 0.53
RPUSD3-209ENST00000451405 H0Y858 1186 aa18.35■□□□□ 0.53
RPUSD3-209ENST00000451405 RFC5P40937 340 aa18.35■□□□□ 0.53
RPUSD3-209ENST00000451405 POLGP54098 1239 aaPredicted RBP18.35■□□□□ 0.53
RPUSD3-209ENST00000451405 LAMTOR4Q0VGL1 99 aa18.35■□□□□ 0.53
RPUSD3-209ENST00000451405 XKR9Q5GH70 373 aa18.35■□□□□ 0.53
RPUSD3-209ENST00000451405 TWF2Q6IBS0 349 aaKnown RBP18.35■□□□□ 0.53
RPUSD3-209ENST00000451405 OTUD6AQ7L8S5 288 aa18.35■□□□□ 0.53
RPUSD3-209ENST00000451405 CATSPER4Q7RTX7 472 aa18.35■□□□□ 0.53
RPUSD3-209ENST00000451405 MTMR9Q96QG7 549 aa18.35■□□□□ 0.53
RPUSD3-209ENST00000451405 HSD17B14Q9BPX1 270 aa18.35■□□□□ 0.53
RPUSD3-209ENST00000451405 TTC12Q9H892 705 aaPredicted RBP18.35■□□□□ 0.53
RPUSD3-209ENST00000451405 SPG21Q9NZD8 308 aa18.35■□□□□ 0.53
RPUSD3-209ENST00000451405 LZTS1Q9Y250 596 aa18.35■□□□□ 0.53
RPUSD3-209ENST00000451405 HIDE1A8MVS5 230 aa18.34■□□□□ 0.53
RPUSD3-209ENST00000451405 TXKP42681 527 aa18.34■□□□□ 0.53
RPUSD3-209ENST00000451405 CALCRLQ16602 461 aa18.34■□□□□ 0.53
RPUSD3-209ENST00000451405 DUSP6Q16828 381 aa18.34■□□□□ 0.53
RPUSD3-209ENST00000451405 PLPP4Q5VZY2 271 aa18.34■□□□□ 0.53
RPUSD3-209ENST00000451405 CCDC83Q8IWF9 413 aa18.34■□□□□ 0.53
RPUSD3-209ENST00000451405 SLC39A11Q8N1S5 342 aa18.34■□□□□ 0.53
RPUSD3-209ENST00000451405 PSPC1Q8WXF1 523 aaKnown RBP18.34■□□□□ 0.53
RPUSD3-209ENST00000451405 KIF2CQ99661 725 aa18.34■□□□□ 0.53
RPUSD3-209ENST00000451405 TMEM60Q9H2L4 133 aa18.34■□□□□ 0.53
RPUSD3-209ENST00000451405 XPNPEP1Q9NQW7 623 aa18.34■□□□□ 0.53
RPUSD3-209ENST00000451405 FAM105AQ9NUU6 356 aa18.34■□□□□ 0.53
RPUSD3-209ENST00000451405 PUF60Q9UHX1 559 aaKnown RBP18.34■□□□□ 0.53
RPUSD3-209ENST00000451405 LIMCH1Q9UPQ0 1083 aa18.34■□□□□ 0.53
RPUSD3-209ENST00000451405 PPME1Q9Y570 386 aa18.34■□□□□ 0.53
RPUSD3-209ENST00000451405 EIF5BO60841 1220 aaKnown RBP18.33■□□□□ 0.52
RPUSD3-209ENST00000451405 ZNF623O75123 536 aa18.33■□□□□ 0.52
RPUSD3-209ENST00000451405 OFD1O75665 1012 aa18.33■□□□□ 0.52
RPUSD3-209ENST00000451405 ATP2B1P20020 1258 aa18.33■□□□□ 0.52
RPUSD3-209ENST00000451405 HOXA11P31270 313 aaPredicted RBP18.33■□□□□ 0.52
RPUSD3-209ENST00000451405 BCAR1P56945 870 aa18.33■□□□□ 0.52
RPUSD3-209ENST00000451405 KCNC3Q14003 757 aa18.33■□□□□ 0.52
RPUSD3-209ENST00000451405 TRIM29Q14134 588 aa18.33■□□□□ 0.52
RPUSD3-209ENST00000451405 EMC2Q15006 297 aa18.33■□□□□ 0.52
RPUSD3-209ENST00000451405 PDE12Q6L8Q7 609 aaKnown RBP18.33■□□□□ 0.52
RPUSD3-209ENST00000451405 EXOC8Q8IYI6 725 aa18.33■□□□□ 0.52
RPUSD3-209ENST00000451405 TCF25Q9BQ70 676 aa18.33■□□□□ 0.52
RPUSD3-209ENST00000451405 AGPAT5Q9NUQ2 364 aa18.33■□□□□ 0.52
RPUSD3-209ENST00000451405 ARID2Q68CP9 1835 aa18.33■□□□□ 0.52
RPUSD3-209ENST00000451405 NEMFO60524 1076 aa18.32■□□□□ 0.52
RPUSD3-209ENST00000451405 LYPLA2O95372 231 aa18.32■□□□□ 0.52
RPUSD3-209ENST00000451405 AFF1P51825 1210 aaKnown RBP18.32■□□□□ 0.52
RPUSD3-209ENST00000451405 KRT17Q04695 432 aa18.32■□□□□ 0.52
RPUSD3-209ENST00000451405 UBXN11Q5T124 520 aa18.32■□□□□ 0.52
RPUSD3-209ENST00000451405 TMC7Q7Z402 723 aa18.32■□□□□ 0.52
RPUSD3-209ENST00000451405 SRGAP1Q7Z6B7 1085 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms