RNA–Protein interactions for RNA: ENST00000449472.1

CCDC197-203, Transcript of coiled-coil domain containing 197, humanhuman

TSL 3

Gene CCDC197, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-203ENST00000449472 NOSTRINQ8IVI9 506 aa12.9□□□□□ -0.34
CCDC197-203ENST00000449472 C4orf32Q8N8J7 132 aa12.9□□□□□ -0.34
CCDC197-203ENST00000449472 ASAP3Q8TDY4 903 aa12.9□□□□□ -0.34
CCDC197-203ENST00000449472 TCP11Q8WWU5 503 aa12.9□□□□□ -0.34
CCDC197-203ENST00000449472 KHSRPQ92945 711 aaKnown RBP eCLIP12.9□□□□□ -0.34
CCDC197-203ENST00000449472 TRAIPQ9BWF2 469 aa12.9□□□□□ -0.34
CCDC197-203ENST00000449472 FAM105AQ9NUU6 356 aa12.9□□□□□ -0.34
CCDC197-203ENST00000449472 NT5C1B-RDH14C9J2C7 533 aa12.89□□□□□ -0.35
CCDC197-203ENST00000449472 ZNF623O75123 536 aa12.89□□□□□ -0.35
CCDC197-203ENST00000449472 OFD1O75665 1012 aa12.89□□□□□ -0.35
CCDC197-203ENST00000449472 XRCC6P12956 609 aaKnown RBP eCLIP12.89□□□□□ -0.35
CCDC197-203ENST00000449472 LAG3P18627 525 aa12.89□□□□□ -0.35
CCDC197-203ENST00000449472 ARL2P36404 184 aa12.89□□□□□ -0.35
CCDC197-203ENST00000449472 NRIP1P48552 1158 aa12.89□□□□□ -0.35
CCDC197-203ENST00000449472 RARRES1P49788 294 aa12.89□□□□□ -0.35
CCDC197-203ENST00000449472 TOB1P50616 345 aaPredicted RBP12.89□□□□□ -0.35
CCDC197-203ENST00000449472 UBE3AQ05086 875 aa12.89□□□□□ -0.35
CCDC197-203ENST00000449472 GNL2Q13823 731 aaKnown RBP12.89□□□□□ -0.35
CCDC197-203ENST00000449472 UBXN11Q5T124 520 aa12.89□□□□□ -0.35
CCDC197-203ENST00000449472 MAEAQ7L5Y9 396 aa12.89□□□□□ -0.35
CCDC197-203ENST00000449472 SRGAP1Q7Z6B7 1085 aa12.89□□□□□ -0.35
CCDC197-203ENST00000449472 FAM178BQ8IXR5 827 aa12.89□□□□□ -0.35
CCDC197-203ENST00000449472 LRRC43Q8N309 656 aa12.89□□□□□ -0.35
CCDC197-203ENST00000449472 TMX3Q96JJ7 454 aa12.89□□□□□ -0.35
CCDC197-203ENST00000449472 EPHX3Q9H6B9 360 aa12.89□□□□□ -0.35
CCDC197-203ENST00000449472 TLR9Q9NR96 1032 aa12.89□□□□□ -0.35
CCDC197-203ENST00000449472 AGPAT5Q9NUQ2 364 aa12.89□□□□□ -0.35
CCDC197-203ENST00000449472 PCDHB2Q9Y5E7 798 aa12.89□□□□□ -0.35
CCDC197-203ENST00000449472 GAS2O43903 313 aaKnown RBP12.88□□□□□ -0.35
CCDC197-203ENST00000449472 TBX10O75333 385 aa12.88□□□□□ -0.35
CCDC197-203ENST00000449472 DGAT1O75907 488 aa12.88□□□□□ -0.35
CCDC197-203ENST00000449472 OR52Z1P0C646 297 aa12.88□□□□□ -0.35
CCDC197-203ENST00000449472 GLRA2P23416 452 aa12.88□□□□□ -0.35
CCDC197-203ENST00000449472 U2AF2P26368 475 aaKnown RBP eCLIP12.88□□□□□ -0.35
CCDC197-203ENST00000449472 AFF1P51825 1210 aaKnown RBP12.88□□□□□ -0.35
CCDC197-203ENST00000449472 PTENP60484 403 aa12.88□□□□□ -0.35
CCDC197-203ENST00000449472 RBM10P98175 930 aaKnown RBP12.88□□□□□ -0.35
CCDC197-203ENST00000449472 PLCB3Q01970 1234 aa12.88□□□□□ -0.35
CCDC197-203ENST00000449472 ECM1Q16610 540 aa12.88□□□□□ -0.35
CCDC197-203ENST00000449472 PUS10Q3MIT2 529 aaKnown RBP12.88□□□□□ -0.35
CCDC197-203ENST00000449472 MRPL10Q7Z7H8 261 aaKnown RBP12.88□□□□□ -0.35
CCDC197-203ENST00000449472 MRPS27Q92552 414 aaKnown RBP12.88□□□□□ -0.35
CCDC197-203ENST00000449472 ZNF558Q96NG5 402 aa12.88□□□□□ -0.35
CCDC197-203ENST00000449472 POLR3CQ9BUI4 534 aaPredicted RBP12.88□□□□□ -0.35
CCDC197-203ENST00000449472 TLE6Q9H808 572 aa12.88□□□□□ -0.35
CCDC197-203ENST00000449472 GPRC5CQ9NQ84 441 aa12.88□□□□□ -0.35
CCDC197-203ENST00000449472 CLEC1BQ9P126 229 aa12.88□□□□□ -0.35
CCDC197-203ENST00000449472 HIDE1A8MVS5 230 aa12.87□□□□□ -0.35
CCDC197-203ENST00000449472 FSCN2O14926 492 aa12.87□□□□□ -0.35
CCDC197-203ENST00000449472 ST18O60284 1047 aa12.87□□□□□ -0.35
CCDC197-203ENST00000449472 SKIP12755 728 aa12.87□□□□□ -0.35
CCDC197-203ENST00000449472 BCAR1P56945 870 aa12.87□□□□□ -0.35
CCDC197-203ENST00000449472 CAPSQ13938 189 aa12.87□□□□□ -0.35
CCDC197-203ENST00000449472 MXD4Q14582 209 aaPredicted RBP12.87□□□□□ -0.35
CCDC197-203ENST00000449472 CSPP1Q1MSJ5 1256 aa12.87□□□□□ -0.35
CCDC197-203ENST00000449472 PLPP4Q5VZY2 271 aa12.87□□□□□ -0.35
CCDC197-203ENST00000449472 POTEGQ6S5H5 508 aa12.87□□□□□ -0.35
CCDC197-203ENST00000449472 AGMOQ6ZNB7 445 aa12.87□□□□□ -0.35
CCDC197-203ENST00000449472 GJD3Q8N144 294 aa12.87□□□□□ -0.35
CCDC197-203ENST00000449472 SLC39A11Q8N1S5 342 aa12.87□□□□□ -0.35
CCDC197-203ENST00000449472 EFHBQ8N7U6 833 aa12.87□□□□□ -0.35
CCDC197-203ENST00000449472 CPB2Q96IY4 423 aa12.87□□□□□ -0.35
CCDC197-203ENST00000449472 NACC1Q96RE7 527 aa12.87□□□□□ -0.35
CCDC197-203ENST00000449472 TCF25Q9BQ70 676 aa12.87□□□□□ -0.35
CCDC197-203ENST00000449472 RNF39Q9H2S5 420 aa12.87□□□□□ -0.35
CCDC197-203ENST00000449472 POLD4Q9HCU8 107 aa12.87□□□□□ -0.35
CCDC197-203ENST00000449472 TUFT1Q9NNX1 390 aa12.87□□□□□ -0.35
CCDC197-203ENST00000449472 TBC1D13Q9NVG8 400 aa12.87□□□□□ -0.35
CCDC197-203ENST00000449472 SPG21Q9NZD8 308 aa12.87□□□□□ -0.35
CCDC197-203ENST00000449472 PUF60Q9UHX1 559 aaKnown RBP12.87□□□□□ -0.35
CCDC197-203ENST00000449472 INPP5FQ9Y2H2 1132 aa12.87□□□□□ -0.35
CCDC197-203ENST00000449472 PCDHB6Q9Y5E3 794 aa12.87□□□□□ -0.35
CCDC197-203ENST00000449472 INO80B-WBP1J3KQ70 363 aa12.86□□□□□ -0.35
CCDC197-203ENST00000449472 MBTPS2O43462 519 aa12.86□□□□□ -0.35
CCDC197-203ENST00000449472 TSPAN1O60635 241 aa12.86□□□□□ -0.35
CCDC197-203ENST00000449472 USO1O60763 962 aaKnown RBP12.86□□□□□ -0.35
CCDC197-203ENST00000449472 GLP2RO95838 553 aa12.86□□□□□ -0.35
CCDC197-203ENST00000449472 RPA1P27694 616 aa12.86□□□□□ -0.35
CCDC197-203ENST00000449472 TRAPPC10P48553 1259 aa12.86□□□□□ -0.35
CCDC197-203ENST00000449472 ALDH7A1P49419 539 aaKnown RBP12.86□□□□□ -0.35
CCDC197-203ENST00000449472 NDUFV1P49821 464 aa12.86□□□□□ -0.35
CCDC197-203ENST00000449472 KRT17Q04695 432 aa12.86□□□□□ -0.35
CCDC197-203ENST00000449472 MBTD1Q05BQ5 628 aa12.86□□□□□ -0.35
CCDC197-203ENST00000449472 PTGDRQ13258 359 aa12.86□□□□□ -0.35
CCDC197-203ENST00000449472 ORC2Q13416 577 aaPredicted RBP12.86□□□□□ -0.35
CCDC197-203ENST00000449472 TFDP1Q14186 410 aa12.86□□□□□ -0.35
CCDC197-203ENST00000449472 IL17AQ16552 155 aa12.86□□□□□ -0.35
CCDC197-203ENST00000449472 NOMO2Q5JPE7 1267 aa12.86□□□□□ -0.35
CCDC197-203ENST00000449472 GLB1LQ6UWU2 654 aa12.86□□□□□ -0.35
CCDC197-203ENST00000449472 TMEM173Q86WV6 379 aaPredicted RBP12.86□□□□□ -0.35
CCDC197-203ENST00000449472 ZNF280BQ86YH2 543 aa12.86□□□□□ -0.35
CCDC197-203ENST00000449472 SMG8Q8ND04 991 aaKnown RBP12.86□□□□□ -0.35
CCDC197-203ENST00000449472 VN1R2Q8NFZ6 395 aa12.86□□□□□ -0.35
CCDC197-203ENST00000449472 PPP2R3CQ969Q6 453 aa12.86□□□□□ -0.35
CCDC197-203ENST00000449472 PGBD4Q96DM1 585 aa12.86□□□□□ -0.35
CCDC197-203ENST00000449472 MSLNLQ96KJ4 702 aa12.86□□□□□ -0.35
CCDC197-203ENST00000449472 CCDC43Q96MW1 224 aaKnown RBP12.86□□□□□ -0.35
CCDC197-203ENST00000449472 EIF2AQ9BY44 585 aaKnown RBP12.86□□□□□ -0.35
CCDC197-203ENST00000449472 POLR3FQ9H1D9 316 aaPredicted RBP12.86□□□□□ -0.35
CCDC197-203ENST00000449472 NRDE2Q9H7Z3 1164 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms