RNA–Protein interactions for RNA: ENST00000449395.5

PRDM15-208, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 6,662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-208ENST00000449395 ANKRD20A8PQ5CZ79 823 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 ANKRD20A2Q5SQ80 823 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 ANKRD20A1Q5TYW2 823 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 RASIP1Q5U651 963 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 PPP2R2DQ66LE6 453 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 RHOT2Q8IXI1 618 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 PIGOQ8TEQ8 1089 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 PCDHA6Q9UN73 950 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 PCDHA8Q9Y5H6 950 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 USP42Q9H9J4 1324 aaKnown RBP11.25□□□□□ -0.61
PRDM15-208ENST00000449395 C19orf81C9J6K1 198 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 PLS3P13797 630 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 ERICH1Q86X53 443 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 PPWD1Q96BP3 646 aaKnown RBP11.25□□□□□ -0.61
PRDM15-208ENST00000449395 KLHL29Q96CT2 875 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 TTC1Q99614 292 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 SHROOM2Q13796 1616 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 CPSF1Q10570 1443 aaKnown RBP11.25□□□□□ -0.61
PRDM15-208ENST00000449395 SPECC1L-ADORA2AF8WAN1 911 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 SLC12A1Q13621 1099 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 BBS9Q3SYG4 887 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 ARHGAP15Q53QZ3 475 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 GJC2Q5T442 439 aaPredicted RBP11.25□□□□□ -0.61
PRDM15-208ENST00000449395 ARMCX2Q7L311 632 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 TBC1D10CQ8IV04 446 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 EFCAB13Q8IY85 973 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 HSPH1Q92598 858 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 ZWILCHQ9H900 591 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 ABCB6Q9NP58 842 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 WDR91A4D1P6 747 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 NR1D1P20393 614 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 OR1G1P47890 313 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 CUL1Q13616 776 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 REM2Q8IYK8 340 aaPredicted RBP11.25□□□□□ -0.61
PRDM15-208ENST00000449395 PDCD7Q8N8D1 485 aaKnown RBP11.25□□□□□ -0.61
PRDM15-208ENST00000449395 PYROXD1Q8WU10 500 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 CHMP6Q96FZ7 201 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 CYP2D6P10635 497 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 GRK4P32298 578 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 PFKFB3Q16875 520 aaPredicted RBP11.25□□□□□ -0.61
PRDM15-208ENST00000449395 IER5Q5VY09 327 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 CENPUQ71F23 418 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 CYB5R4Q7L1T6 521 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 RBM23Q86U06 439 aaKnown RBP11.25□□□□□ -0.61
PRDM15-208ENST00000449395 CSGALNACT1Q8TDX6 532 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 SEPT8Q92599 483 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 YIPF2Q9BWQ6 316 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 UBN1Q9NPG3 1134 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 PPME1Q9Y570 386 aa11.25□□□□□ -0.61
PRDM15-208ENST00000449395 ZBED1O96006 694 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 RPSAP08865 295 aaKnown RBP11.24□□□□□ -0.61
PRDM15-208ENST00000449395 CCL23P55773 120 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 BTG3Q14201 252 aaPredicted RBP11.24□□□□□ -0.61
PRDM15-208ENST00000449395 NBPF9Q3BBW0 867 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 C6orf118Q5T5N4 469 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 NUDCD1Q96RS6 583 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 ABCF3Q9NUQ8 709 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 FARP1Q9Y4F1 1045 aaPredicted RBP11.24□□□□□ -0.61
PRDM15-208ENST00000449395 STK36Q9NRP7 1315 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 CYP2E1P05181 493 aaPredicted RBP11.24□□□□□ -0.61
PRDM15-208ENST00000449395 CTNNB1P35222 781 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 SPOPLQ6IQ16 392 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 ZNF579Q8NAF0 562 aaKnown RBP11.24□□□□□ -0.61
PRDM15-208ENST00000449395 ARNTL2Q8WYA1 636 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 NFU1Q9UMS0 254 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 SCINQ9Y6U3 715 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 GNGT2O14610 69 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 RPS6KA5O75582 802 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 LDHAP00338 332 aaKnown RBP11.24□□□□□ -0.61
PRDM15-208ENST00000449395 FGGP02679 453 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 MX2P20592 715 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 PSMA2P25787 234 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 CDO1Q16878 200 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 RNF139Q8WU17 664 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 TUBB6Q9BUF5 446 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 TXLNGQ9NUQ3 528 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 DNAJC12Q9UKB3 198 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 ZBTB5O15062 677 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 TTI1O43156 1089 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 STMN1P16949 149 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 GIMAP8Q8ND71 665 aaPredicted RBP11.24□□□□□ -0.61
PRDM15-208ENST00000449395 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.24□□□□□ -0.613e-6■■■■■ 67.6
PRDM15-208ENST00000449395 TPX2Q9ULW0 747 aaKnown RBP11.24□□□□□ -0.61
PRDM15-208ENST00000449395 PALMO75781 387 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 CYP2C8P10632 490 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 JAK3P52333 1124 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 TSPY1Q01534 308 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 AAK1Q2M2I8 961 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 TOGARAM2Q6ZUX3 1019 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 MTRQ99707 1265 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 ATP6V0A4Q9HBG4 840 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 DIS3Q9Y2L1 958 aaKnown RBP11.24□□□□□ -0.61
PRDM15-208ENST00000449395 ADCY2Q08462 1091 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 EPHA10Q5JZY3 1008 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 SARM1Q6SZW1 724 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 DNAJC17Q9NVM6 304 aaKnown RBP11.24□□□□□ -0.61
PRDM15-208ENST00000449395 CEP72Q9P209 647 aa11.24□□□□□ -0.61
PRDM15-208ENST00000449395 SPATA31D1Q6ZQQ2 1576 aa11.23□□□□□ -0.61
PRDM15-208ENST00000449395 IQANK1A0A1B0GTG1 560 aa11.23□□□□□ -0.61
PRDM15-208ENST00000449395 TJP3O95049 919 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms