RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 PTENP60484 403 aa11.76□□□□□ -0.53
SMPD4-211ENST00000449159 WDR5P61964 334 aaKnown RBP11.76□□□□□ -0.53
SMPD4-211ENST00000449159 DEFB103AP81534 67 aa11.76□□□□□ -0.53
SMPD4-211ENST00000449159 CDC42EP1Q00587 391 aa11.76□□□□□ -0.53
SMPD4-211ENST00000449159 MBTD1Q05BQ5 628 aa11.76□□□□□ -0.53
SMPD4-211ENST00000449159 NFX1Q12986 1120 aaKnown RBP11.76□□□□□ -0.53
SMPD4-211ENST00000449159 GIT2Q14161 759 aa11.76□□□□□ -0.53
SMPD4-211ENST00000449159 TFDP1Q14186 410 aa11.76□□□□□ -0.53
SMPD4-211ENST00000449159 CDCA2Q69YH5 1023 aaPredicted RBP11.76□□□□□ -0.53
SMPD4-211ENST00000449159 SV2BQ7L1I2 683 aa11.76□□□□□ -0.53
SMPD4-211ENST00000449159 DYMQ7RTS9 669 aa11.76□□□□□ -0.53
SMPD4-211ENST00000449159 TMCO2Q7Z6W1 182 aaPredicted RBP11.76□□□□□ -0.53
SMPD4-211ENST00000449159 GRAMD1CQ8IYS0 662 aa11.76□□□□□ -0.53
SMPD4-211ENST00000449159 ZNF710Q8N1W2 664 aa11.76□□□□□ -0.53
SMPD4-211ENST00000449159 IQUBQ8NA54 791 aa11.76□□□□□ -0.53
SMPD4-211ENST00000449159 HERVK_113Q902F9 699 aa11.76□□□□□ -0.53
SMPD4-211ENST00000449159 KIFAP3Q92845 792 aa11.76□□□□□ -0.53
SMPD4-211ENST00000449159 DRC1Q96MC2 740 aa11.76□□□□□ -0.53
SMPD4-211ENST00000449159 KBTBD4Q9NVX7 518 aa11.76□□□□□ -0.53
SMPD4-211ENST00000449159 SERTAD1Q9UHV2 236 aa11.76□□□□□ -0.53
SMPD4-211ENST00000449159 BDP1A6H8Y1 2624 aa11.76□□□□□ -0.53
SMPD4-211ENST00000449159 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-211ENST00000449159 INO80B-WBP1J3KQ70 363 aa11.75□□□□□ -0.53
SMPD4-211ENST00000449159 BAIAP3O94812 1187 aa11.75□□□□□ -0.53
SMPD4-211ENST00000449159 EDN1P05305 212 aa11.75□□□□□ -0.53
SMPD4-211ENST00000449159 ACTN1P12814 892 aa11.75□□□□□ -0.53
SMPD4-211ENST00000449159 CASP1P29466 404 aa11.75□□□□□ -0.53
SMPD4-211ENST00000449159 SYKP43405 635 aa11.75□□□□□ -0.53
SMPD4-211ENST00000449159 NAMPTP43490 491 aa11.75□□□□□ -0.53
SMPD4-211ENST00000449159 NPTX2P47972 431 aa11.75□□□□□ -0.53
SMPD4-211ENST00000449159 IKBKEQ14164 716 aa11.75□□□□□ -0.53
SMPD4-211ENST00000449159 LONRF3Q496Y0 759 aa11.75□□□□□ -0.53
SMPD4-211ENST00000449159 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.75□□□□□ -0.53
SMPD4-211ENST00000449159 CATSPER4Q7RTX7 472 aa11.75□□□□□ -0.53
SMPD4-211ENST00000449159 SRGAP1Q7Z6B7 1085 aa11.75□□□□□ -0.53
SMPD4-211ENST00000449159 RTN4RL1Q86UN2 441 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-211ENST00000449159 IFNLR1Q8IU57 520 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-211ENST00000449159 TMEM87AQ8NBN3 555 aa11.75□□□□□ -0.53
SMPD4-211ENST00000449159 DDX12PQ92771 950 aa11.75□□□□□ -0.53
SMPD4-211ENST00000449159 APBB2Q92870 758 aa11.75□□□□□ -0.53
SMPD4-211ENST00000449159 DNAJC19Q96DA6 116 aa11.75□□□□□ -0.53
SMPD4-211ENST00000449159 IFT74Q96LB3 600 aa11.75□□□□□ -0.53
SMPD4-211ENST00000449159 TIPINQ9BVW5 301 aa11.75□□□□□ -0.53
SMPD4-211ENST00000449159 INO80BQ9C086 356 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-211ENST00000449159 TNMDQ9H2S6 317 aa11.75□□□□□ -0.53
SMPD4-211ENST00000449159 CUEDC2Q9H467 287 aa11.75□□□□□ -0.53
SMPD4-211ENST00000449159 PRDM6Q9NQX0 595 aa11.75□□□□□ -0.53
SMPD4-211ENST00000449159 ODF2LQ9ULJ1 636 aa11.75□□□□□ -0.53
SMPD4-211ENST00000449159 COL4A4P53420 1690 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-211ENST00000449159 COL4A6Q14031 1691 aa11.75□□□□□ -0.53
SMPD4-211ENST00000449159 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-211ENST00000449159 ABHD14A-ACY1A0A1B0GW23 586 aa11.74□□□□□ -0.53
SMPD4-211ENST00000449159 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-211ENST00000449159 GOLGA6L4A6NEF3 574 aa11.74□□□□□ -0.53
SMPD4-211ENST00000449159 TTLL13PA6NNM8 815 aa11.74□□□□□ -0.53
SMPD4-211ENST00000449159 CCDC169A6NNP5 214 aa11.74□□□□□ -0.53
SMPD4-211ENST00000449159 GPR182O15218 404 aa11.74□□□□□ -0.53
SMPD4-211ENST00000449159 B4GALT5O43286 388 aa11.74□□□□□ -0.53
SMPD4-211ENST00000449159 TSPAN1O60635 241 aa11.74□□□□□ -0.53
SMPD4-211ENST00000449159 TBCAO75347 108 aaKnown RBP11.74□□□□□ -0.53
SMPD4-211ENST00000449159 FAM13AO94988 1023 aa11.74□□□□□ -0.53
SMPD4-211ENST00000449159 SLFN14P0C7P3 912 aa11.74□□□□□ -0.53
SMPD4-211ENST00000449159 PLS3P13797 630 aa11.74□□□□□ -0.53
SMPD4-211ENST00000449159 SFPQP23246 707 aaKnown RBP eCLIP11.74□□□□□ -0.53
SMPD4-211ENST00000449159 AFMP43652 599 aa11.74□□□□□ -0.53
SMPD4-211ENST00000449159 ZNF131P52739 623 aa11.74□□□□□ -0.53
SMPD4-211ENST00000449159 POU5F1BQ06416 359 aa11.74□□□□□ -0.53
SMPD4-211ENST00000449159 DMP1Q13316 513 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-211ENST00000449159 DSC3Q14574 896 aa11.74□□□□□ -0.53
SMPD4-211ENST00000449159 GRIN2CQ14957 1233 aa11.74□□□□□ -0.53
SMPD4-211ENST00000449159 PPP2R5AQ15172 486 aa11.74□□□□□ -0.53
SMPD4-211ENST00000449159 AMHR2Q16671 573 aa11.74□□□□□ -0.53
SMPD4-211ENST00000449159 TJAP1Q5JTD0 557 aa11.74□□□□□ -0.53
SMPD4-211ENST00000449159 TIFAQ96CG3 184 aa11.74□□□□□ -0.53
SMPD4-211ENST00000449159 NFKBIZQ9BYH8 718 aa11.74□□□□□ -0.53
SMPD4-211ENST00000449159 TRIM9Q9C026 710 aa11.74□□□□□ -0.53
SMPD4-211ENST00000449159 CCDC113Q9H0I3 377 aa11.74□□□□□ -0.53
SMPD4-211ENST00000449159 TSPYL2Q9H2G4 693 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-211ENST00000449159 BLZF1Q9H2G9 400 aa11.74□□□□□ -0.53
SMPD4-211ENST00000449159 ZHX3Q9H4I2 956 aa11.74□□□□□ -0.53
SMPD4-211ENST00000449159 PIN4Q9Y237 131 aaKnown RBP11.74□□□□□ -0.53
SMPD4-211ENST00000449159 USP20Q9Y2K6 914 aa11.74□□□□□ -0.53
SMPD4-211ENST00000449159 SLC4A7Q9Y6M7 1214 aa11.74□□□□□ -0.53
SMPD4-211ENST00000449159 FNDC1Q4ZHG4 1894 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-211ENST00000449159 DENND3A2RUS2 1198 aa11.73□□□□□ -0.53
SMPD4-211ENST00000449159 GRXCR1A8MXD5 290 aa11.73□□□□□ -0.53
SMPD4-211ENST00000449159 ENPP3O14638 875 aa11.73□□□□□ -0.53
SMPD4-211ENST00000449159 SLC16A4O15374 487 aa11.73□□□□□ -0.53
SMPD4-211ENST00000449159 ZNF202O95125 648 aa11.73□□□□□ -0.53
SMPD4-211ENST00000449159 LIG1P18858 919 aa11.73□□□□□ -0.53
SMPD4-211ENST00000449159 IBSPP21815 317 aaPredicted RBP11.73□□□□□ -0.53
SMPD4-211ENST00000449159 KCNJ6P48051 423 aa11.73□□□□□ -0.53
SMPD4-211ENST00000449159 SNW1Q13573 536 aaKnown RBP11.73□□□□□ -0.53
SMPD4-211ENST00000449159 CUL4BQ13620 913 aa11.73□□□□□ -0.53
SMPD4-211ENST00000449159 CSPP1Q1MSJ5 1256 aa11.73□□□□□ -0.53
SMPD4-211ENST00000449159 ODR4Q5SWX8 454 aa11.73□□□□□ -0.53
SMPD4-211ENST00000449159 CLEC17AQ6ZS10 378 aa11.73□□□□□ -0.53
SMPD4-211ENST00000449159 TAS1R3Q7RTX0 852 aa11.73□□□□□ -0.53
SMPD4-211ENST00000449159 SFR1Q86XK3 245 aa11.73□□□□□ -0.53
SMPD4-211ENST00000449159 ZBTB8OSQ8IWT0 167 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms