RNA–Protein interactions for RNA: ENST00000448502.5

UBE2F-217, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 4

Gene UBE2F, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-217ENST00000448502 FAM105AQ9NUU6 356 aa22.75■■□□□ 1.23
UBE2F-217ENST00000448502 TBC1D13Q9NVG8 400 aa22.75■■□□□ 1.23
UBE2F-217ENST00000448502 WRAP73Q9P2S5 460 aaPredicted RBP22.75■■□□□ 1.23
UBE2F-217ENST00000448502 CXCL14O95715 111 aa22.74■■□□□ 1.23
UBE2F-217ENST00000448502 TPRNQ4KMQ1 711 aa22.74■■□□□ 1.23
UBE2F-217ENST00000448502 VPS52Q8N1B4 723 aa22.74■■□□□ 1.23
UBE2F-217ENST00000448502 FBXL6Q8N531 539 aa22.74■■□□□ 1.23
UBE2F-217ENST00000448502 AUTS2Q8WXX7 1259 aa22.74■■□□□ 1.23
UBE2F-217ENST00000448502 PHF20Q9BVI0 1012 aa22.74■■□□□ 1.23
UBE2F-217ENST00000448502 ADAM7Q9H2U9 754 aa22.74■■□□□ 1.23
UBE2F-217ENST00000448502 POMKQ9H5K3 350 aa22.74■■□□□ 1.23
UBE2F-217ENST00000448502 NRDE2Q9H7Z3 1164 aa22.74■■□□□ 1.23
UBE2F-217ENST00000448502 PDRG1Q9NUG6 133 aa22.74■■□□□ 1.23
UBE2F-217ENST00000448502 USP34Q70CQ2 3546 aa22.73■■□□□ 1.23
UBE2F-217ENST00000448502 B4GALT3O60512 393 aa22.73■■□□□ 1.23
UBE2F-217ENST00000448502 DTNBO60941 627 aa22.73■■□□□ 1.23
UBE2F-217ENST00000448502 ZNF623O75123 536 aa22.73■■□□□ 1.23
UBE2F-217ENST00000448502 SKIP12755 728 aa22.73■■□□□ 1.23
UBE2F-217ENST00000448502 CA8P35219 290 aa22.73■■□□□ 1.23
UBE2F-217ENST00000448502 QARSP47897 775 aaKnown RBP22.73■■□□□ 1.23
UBE2F-217ENST00000448502 SCRN1Q12765 414 aa22.73■■□□□ 1.23
UBE2F-217ENST00000448502 NOMO2Q5JPE7 1267 aa22.73■■□□□ 1.23
UBE2F-217ENST00000448502 GLB1LQ6UWU2 654 aa22.73■■□□□ 1.23
UBE2F-217ENST00000448502 SUGP1Q8IWZ8 645 aaKnown RBP22.73■■□□□ 1.23
UBE2F-217ENST00000448502 RSPH1Q8WYR4 309 aa22.73■■□□□ 1.23
UBE2F-217ENST00000448502 IGSF21Q96ID5 467 aa22.73■■□□□ 1.23
UBE2F-217ENST00000448502 FAM20AQ96MK3 541 aa22.73■■□□□ 1.23
UBE2F-217ENST00000448502 JPH2Q9BR39 696 aaPredicted RBP22.73■■□□□ 1.23
UBE2F-217ENST00000448502 GJB4Q9NTQ9 266 aa22.73■■□□□ 1.23
UBE2F-217ENST00000448502 INPP5FQ9Y2H2 1132 aa22.73■■□□□ 1.23
UBE2F-217ENST00000448502 COL4A3BPQ9Y5P4 624 aa22.73■■□□□ 1.23
UBE2F-217ENST00000448502 ARID2Q68CP9 1835 aa22.73■■□□□ 1.23
UBE2F-217ENST00000448502 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.72■■□□□ 1.23
UBE2F-217ENST00000448502 CCDC194A0A1B0GVG4 234 aa22.72■■□□□ 1.23
UBE2F-217ENST00000448502 OFD1O75665 1012 aa22.72■■□□□ 1.23
UBE2F-217ENST00000448502 GALTP07902 379 aa22.72■■□□□ 1.23
UBE2F-217ENST00000448502 RAB27AP51159 221 aa22.72■■□□□ 1.23
UBE2F-217ENST00000448502 ITIH3Q06033 890 aa22.72■■□□□ 1.23
UBE2F-217ENST00000448502 PPP4R3AQ6IN85 833 aa22.72■■□□□ 1.23
UBE2F-217ENST00000448502 NEK8Q86SG6 692 aa22.72■■□□□ 1.23
UBE2F-217ENST00000448502 DDX53Q86TM3 631 aaKnown RBP22.72■■□□□ 1.23
UBE2F-217ENST00000448502 HAS1Q92839 578 aa22.72■■□□□ 1.23
UBE2F-217ENST00000448502 PHOX2BQ99453 314 aa22.72■■□□□ 1.23
UBE2F-217ENST00000448502 VN1R3Q9BXE9 311 aa22.72■■□□□ 1.23
UBE2F-217ENST00000448502 TSHZ2Q9NRE2 1034 aa22.72■■□□□ 1.23
UBE2F-217ENST00000448502 AGPAT5Q9NUQ2 364 aa22.72■■□□□ 1.23
UBE2F-217ENST00000448502 DNAJB4Q9UDY4 337 aa22.72■■□□□ 1.23
UBE2F-217ENST00000448502 IRAK3Q9Y616 596 aa22.72■■□□□ 1.23
UBE2F-217ENST00000448502 WEE2P0C1S8 567 aa22.71■■□□□ 1.23
UBE2F-217ENST00000448502 CTSAP10619 480 aa22.71■■□□□ 1.23
UBE2F-217ENST00000448502 POLGP54098 1239 aaPredicted RBP22.71■■□□□ 1.23
UBE2F-217ENST00000448502 VCPP55072 806 aaKnown RBP22.71■■□□□ 1.23
UBE2F-217ENST00000448502 CES5AQ6NT32 575 aa22.71■■□□□ 1.23
UBE2F-217ENST00000448502 AGMOQ6ZNB7 445 aa22.71■■□□□ 1.23
UBE2F-217ENST00000448502 C12orf76Q8N812 135 aaPredicted RBP22.71■■□□□ 1.23
UBE2F-217ENST00000448502 OXER1Q8TDS5 423 aa22.71■■□□□ 1.23
UBE2F-217ENST00000448502 SLC7A3Q8WY07 619 aa22.71■■□□□ 1.23
UBE2F-217ENST00000448502 CEP170P1Q96L14 293 aa22.71■■□□□ 1.23
UBE2F-217ENST00000448502 SLKQ9H2G2 1235 aaPredicted RBP22.71■■□□□ 1.23
UBE2F-217ENST00000448502 DHX33Q9H6R0 707 aaKnown RBP22.71■■□□□ 1.23
UBE2F-217ENST00000448502 MINDY3Q9H8M7 445 aa22.71■■□□□ 1.23
UBE2F-217ENST00000448502 NR2E1Q9Y466 385 aa22.71■■□□□ 1.23
UBE2F-217ENST00000448502 PCDHB2Q9Y5E7 798 aa22.71■■□□□ 1.23
UBE2F-217ENST00000448502 C2CD4DB7Z1M9 353 aa22.7■■□□□ 1.22
UBE2F-217ENST00000448502 P4HBP07237 508 aaKnown RBP22.7■■□□□ 1.22
UBE2F-217ENST00000448502 GCFC2P16383 781 aaKnown RBP22.7■■□□□ 1.22
UBE2F-217ENST00000448502 EPCAMP16422 314 aa22.7■■□□□ 1.22
UBE2F-217ENST00000448502 SLC11A1P49279 550 aa22.7■■□□□ 1.22
UBE2F-217ENST00000448502 BMS1Q14692 1282 aaKnown RBP22.7■■□□□ 1.22
UBE2F-217ENST00000448502 RARS2Q5T160 578 aaKnown RBP22.7■■□□□ 1.22
UBE2F-217ENST00000448502 KANK3Q6NY19 840 aa22.7■■□□□ 1.22
UBE2F-217ENST00000448502 ZNF280BQ86YH2 543 aa22.7■■□□□ 1.22
UBE2F-217ENST00000448502 PRPF31Q8WWY3 499 aaKnown RBP22.7■■□□□ 1.22
UBE2F-217ENST00000448502 TMEM143Q96AN5 459 aa22.7■■□□□ 1.22
UBE2F-217ENST00000448502 NECTIN4Q96NY8 510 aa22.7■■□□□ 1.22
UBE2F-217ENST00000448502 GBP3Q9H0R5 595 aa22.7■■□□□ 1.22
UBE2F-217ENST00000448502 BMP2KQ9NSY1 1161 aaPredicted RBP22.7■■□□□ 1.22
UBE2F-217ENST00000448502 STK36Q9NRP7 1315 aa22.7■■□□□ 1.22
UBE2F-217ENST00000448502 CCNT1O60563 726 aaKnown RBP22.69■■□□□ 1.22
UBE2F-217ENST00000448502 DKC1O60832 514 aaKnown RBP eCLIP22.69■■□□□ 1.22
UBE2F-217ENST00000448502 CDKL5O76039 1030 aa22.69■■□□□ 1.22
UBE2F-217ENST00000448502 HOXA11P31270 313 aaPredicted RBP22.69■■□□□ 1.22
UBE2F-217ENST00000448502 AFF1P51825 1210 aaKnown RBP22.69■■□□□ 1.22
UBE2F-217ENST00000448502 RNASELQ05823 741 aaKnown RBP22.69■■□□□ 1.22
UBE2F-217ENST00000448502 TCF15Q12870 199 aa22.69■■□□□ 1.22
UBE2F-217ENST00000448502 EARS2Q5JPH6 523 aaKnown RBP22.69■■□□□ 1.22
UBE2F-217ENST00000448502 PIK3AP1Q6ZUJ8 805 aa22.69■■□□□ 1.22
UBE2F-217ENST00000448502 ZBTB33Q86T24 672 aa22.69■■□□□ 1.22
UBE2F-217ENST00000448502 POTEDQ86YR6 584 aa22.69■■□□□ 1.22
UBE2F-217ENST00000448502 KREMEN2Q8NCW0 462 aa22.69■■□□□ 1.22
UBE2F-217ENST00000448502 FEZF2Q8TBJ5 459 aa22.69■■□□□ 1.22
UBE2F-217ENST00000448502 SLC22A17Q8WUG5 538 aa22.69■■□□□ 1.22
UBE2F-217ENST00000448502 LXNQ9BS40 222 aa22.69■■□□□ 1.22
UBE2F-217ENST00000448502 RGL1Q9NZL6 768 aa22.69■■□□□ 1.22
UBE2F-217ENST00000448502 TPCN1Q9ULQ1 816 aa22.69■■□□□ 1.22
UBE2F-217ENST00000448502 DENND4AQ7Z401 1863 aa22.68■■□□□ 1.22
UBE2F-217ENST00000448502 CARNS1A5YM72 827 aa22.68■■□□□ 1.22
UBE2F-217ENST00000448502 TBX3O15119 743 aa22.68■■□□□ 1.22
UBE2F-217ENST00000448502 PDGFBP01127 241 aaPredicted RBP22.68■■□□□ 1.22
UBE2F-217ENST00000448502 SRGAP2CP0DJJ0 459 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms