RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 BLOC1S2Q6QNY1 142 aa27.39■■□□□ 1.98
PMS1-214ENST00000446877 CATSPER4Q7RTX7 472 aa27.39■■□□□ 1.98
PMS1-214ENST00000446877 RHPN2Q8IUC4 686 aa27.39■■□□□ 1.98
PMS1-214ENST00000446877 GJA10Q969M2 543 aa27.39■■□□□ 1.98
PMS1-214ENST00000446877 PGBD4Q96DM1 585 aa27.39■■□□□ 1.98
PMS1-214ENST00000446877 C22orf23Q9BZE7 217 aa27.39■■□□□ 1.98
PMS1-214ENST00000446877 FAM105AQ9NUU6 356 aa27.39■■□□□ 1.98
PMS1-214ENST00000446877 STK39Q9UEW8 545 aa27.39■■□□□ 1.98
PMS1-214ENST00000446877 DDX11L8A8MPP1 907 aa27.38■■□□□ 1.97
PMS1-214ENST00000446877 CDC45O75419 566 aa27.38■■□□□ 1.97
PMS1-214ENST00000446877 OTOP3Q7RTS5 596 aa27.38■■□□□ 1.97
PMS1-214ENST00000446877 URGCPQ8TCY9 931 aa27.38■■□□□ 1.97
PMS1-214ENST00000446877 JPH2Q9BR39 696 aaPredicted RBP27.38■■□□□ 1.97
PMS1-214ENST00000446877 EMILIN2Q9BXX0 1053 aa27.38■■□□□ 1.97
PMS1-214ENST00000446877 SFXN1Q9H9B4 322 aa27.38■■□□□ 1.97
PMS1-214ENST00000446877 MYO15AQ9UKN7 3530 aa27.38■■□□□ 1.97
PMS1-214ENST00000446877 IGKV6-21A0A0C4DH24 114 aa27.37■■□□□ 1.97
PMS1-214ENST00000446877 EDIL3O43854 480 aa27.37■■□□□ 1.97
PMS1-214ENST00000446877 ZNF623O75123 536 aa27.37■■□□□ 1.97
PMS1-214ENST00000446877 OFD1O75665 1012 aa27.37■■□□□ 1.97
PMS1-214ENST00000446877 PSMD10O75832 226 aa27.37■■□□□ 1.97
PMS1-214ENST00000446877 NBL1P41271 181 aa27.37■■□□□ 1.97
PMS1-214ENST00000446877 Q4G0T1 1027 aa27.37■■□□□ 1.97
PMS1-214ENST00000446877 ASCL5Q7RTU5 278 aa27.37■■□□□ 1.97
PMS1-214ENST00000446877 TBCKQ8TEA7 893 aa27.37■■□□□ 1.97
PMS1-214ENST00000446877 NLRP4Q96MN2 994 aa27.37■■□□□ 1.97
PMS1-214ENST00000446877 SH2D3AQ9BRG2 576 aa27.37■■□□□ 1.97
PMS1-214ENST00000446877 SH3GLB2Q9NR46 395 aa27.37■■□□□ 1.97
PMS1-214ENST00000446877 NID2Q14112 1375 aa27.36■■□□□ 1.97
PMS1-214ENST00000446877 TMEM150BA6NC51 233 aa27.36■■□□□ 1.97
PMS1-214ENST00000446877 MAFO75444 373 aaPredicted RBP27.36■■□□□ 1.97
PMS1-214ENST00000446877 IFNAR1P17181 557 aa27.36■■□□□ 1.97
PMS1-214ENST00000446877 KLRC2P26717 231 aa27.36■■□□□ 1.97
PMS1-214ENST00000446877 SLC11A1P49279 550 aa27.36■■□□□ 1.97
PMS1-214ENST00000446877 NTRK3Q16288 839 aa27.36■■□□□ 1.97
PMS1-214ENST00000446877 CCDC149Q6ZUS6 474 aa27.36■■□□□ 1.97
PMS1-214ENST00000446877 GPR149Q86SP6 731 aa27.36■■□□□ 1.97
PMS1-214ENST00000446877 FLCNQ8NFG4 579 aa27.36■■□□□ 1.97
PMS1-214ENST00000446877 BCL7CQ8WUZ0 217 aaPredicted RBP27.36■■□□□ 1.97
PMS1-214ENST00000446877 FOXK2Q01167 660 aa27.35■■□□□ 1.97
PMS1-214ENST00000446877 PTPN14Q15678 1187 aa27.35■■□□□ 1.97
PMS1-214ENST00000446877 CEP89Q96ST8 783 aa27.35■■□□□ 1.97
PMS1-214ENST00000446877 DNAJB4Q9UDY4 337 aa27.35■■□□□ 1.97
PMS1-214ENST00000446877 PRR23AA6NEV1 266 aa27.34■■□□□ 1.97
PMS1-214ENST00000446877 MEIS3P2A8K0S8 358 aa27.34■■□□□ 1.97
PMS1-214ENST00000446877 STBD1O95210 358 aa27.34■■□□□ 1.97
PMS1-214ENST00000446877 ALDH2P05091 517 aa27.34■■□□□ 1.97
PMS1-214ENST00000446877 KSR1Q8IVT5 923 aa27.34■■□□□ 1.97
PMS1-214ENST00000446877 TRIM22Q8IYM9 498 aa27.34■■□□□ 1.97
PMS1-214ENST00000446877 FBXL16Q8N461 479 aa27.34■■□□□ 1.97
PMS1-214ENST00000446877 FAM193BQ96PV7 902 aaPredicted RBP27.34■■□□□ 1.97
PMS1-214ENST00000446877 KANSL3Q9P2N6 904 aa27.34■■□□□ 1.97
PMS1-214ENST00000446877 PCDHB2Q9Y5E7 798 aa27.34■■□□□ 1.97
PMS1-214ENST00000446877 RIF1Q5UIP0 2472 aaKnown RBP27.34■■□□□ 1.97
PMS1-214ENST00000446877 MYO10Q9HD67 2058 aa27.33■■□□□ 1.97
PMS1-214ENST00000446877 CYP3A7-CYP3A51PA0A087WV96 503 aa27.33■■□□□ 1.97
PMS1-214ENST00000446877 SSBP05455 408 aaKnown RBP eCLIP27.33■■□□□ 1.97
PMS1-214ENST00000446877 RPS6KB1P23443 525 aa27.33■■□□□ 1.97
PMS1-214ENST00000446877 CYP3A7P24462 503 aa27.33■■□□□ 1.97
PMS1-214ENST00000446877 CCT2P78371 535 aaKnown RBP27.33■■□□□ 1.97
PMS1-214ENST00000446877 TDGQ13569 410 aa27.33■■□□□ 1.97
PMS1-214ENST00000446877 ZNF280BQ86YH2 543 aa27.33■■□□□ 1.97
PMS1-214ENST00000446877 KCNB2Q92953 911 aa27.33■■□□□ 1.97
PMS1-214ENST00000446877 NKD2Q969F2 451 aaPredicted RBP27.33■■□□□ 1.97
PMS1-214ENST00000446877 KLHL5Q96PQ7 755 aa27.33■■□□□ 1.97
PMS1-214ENST00000446877 FBXL21Q9UKT6 434 aa27.33■■□□□ 1.97
PMS1-214ENST00000446877 PCDHA4Q9UN74 947 aa27.33■■□□□ 1.97
PMS1-214ENST00000446877 TDP2O95551 362 aa27.32■■□□□ 1.96
PMS1-214ENST00000446877 PSMC5P62195 406 aa27.32■■□□□ 1.96
PMS1-214ENST00000446877 FRMD5Q7Z6J6 570 aa27.32■■□□□ 1.96
PMS1-214ENST00000446877 VN1R3Q9BXE9 311 aa27.32■■□□□ 1.96
PMS1-214ENST00000446877 MRPL17Q9NRX2 175 aaKnown RBP27.32■■□□□ 1.96
PMS1-214ENST00000446877 FAN1Q9Y2M0 1017 aa27.32■■□□□ 1.96
PMS1-214ENST00000446877 SNX14Q9Y5W7 946 aa27.32■■□□□ 1.96
PMS1-214ENST00000446877 CNPP09543 421 aaKnown RBP27.31■■□□□ 1.96
PMS1-214ENST00000446877 PSMA5P28066 241 aa27.31■■□□□ 1.96
PMS1-214ENST00000446877 PDIA3P30101 505 aaKnown RBP27.31■■□□□ 1.96
PMS1-214ENST00000446877 B3GNT9Q6UX72 402 aa27.31■■□□□ 1.96
PMS1-214ENST00000446877 ANO5Q75V66 913 aa27.31■■□□□ 1.96
PMS1-214ENST00000446877 SKAP1Q86WV1 359 aa27.31■■□□□ 1.96
PMS1-214ENST00000446877 SLC7A3Q8WY07 619 aa27.31■■□□□ 1.96
PMS1-214ENST00000446877 TMEM175Q9BSA9 504 aa27.31■■□□□ 1.96
PMS1-214ENST00000446877 NCOA5Q9HCD5 579 aaKnown RBP27.31■■□□□ 1.96
PMS1-214ENST00000446877 AGPAT5Q9NUQ2 364 aa27.31■■□□□ 1.96
PMS1-214ENST00000446877 DKC1O60832 514 aaKnown RBP eCLIP27.3■■□□□ 1.96
PMS1-214ENST00000446877 HSPA4P34932 840 aa27.3■■□□□ 1.96
PMS1-214ENST00000446877 CLCN4P51793 760 aa27.3■■□□□ 1.96
PMS1-214ENST00000446877 SSRP1Q08945 709 aaKnown RBP27.3■■□□□ 1.96
PMS1-214ENST00000446877 LETM2Q2VYF4 491 aa27.3■■□□□ 1.96
PMS1-214ENST00000446877 ELMSAN1Q6PJG2 1045 aa27.3■■□□□ 1.96
PMS1-214ENST00000446877 C15orf39Q6ZRI6 1047 aa27.3■■□□□ 1.96
PMS1-214ENST00000446877 EXOC8Q8IYI6 725 aa27.3■■□□□ 1.96
PMS1-214ENST00000446877 AGXT2Q9BYV1 514 aa27.3■■□□□ 1.96
PMS1-214ENST00000446877 RSAD1Q9HA92 442 aa27.3■■□□□ 1.96
PMS1-214ENST00000446877 COL4A3BPQ9Y5P4 624 aa27.3■■□□□ 1.96
PMS1-214ENST00000446877 CNTNAP2Q9UHC6 1331 aa27.3■■□□□ 1.96
PMS1-214ENST00000446877 DMDP11532 3685 aa27.3■■□□□ 1.96
PMS1-214ENST00000446877 VPS13AQ96RL7 3174 aa27.3■■□□□ 1.96
PMS1-214ENST00000446877 DDHD2O94830 711 aa27.29■■□□□ 1.96
PMS1-214ENST00000446877 AOC1P19801 751 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms