RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 RBM23Q86U06 439 aaKnown RBP22.1■■□□□ 1.13
SHROOM1-204ENST00000440118 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.1■■□□□ 1.13
SHROOM1-204ENST00000440118 PIGOQ8TEQ8 1089 aa22.1■■□□□ 1.13
SHROOM1-204ENST00000440118 CWH43Q9H720 699 aa22.1■■□□□ 1.13
SHROOM1-204ENST00000440118 ENTPD7Q9NQZ7 604 aa22.1■■□□□ 1.13
SHROOM1-204ENST00000440118 RNF19AQ9NV58 838 aa22.1■■□□□ 1.13
SHROOM1-204ENST00000440118 USO1O60763 962 aaKnown RBP22.09■■□□□ 1.13
SHROOM1-204ENST00000440118 IL9P15248 144 aa22.09■■□□□ 1.13
SHROOM1-204ENST00000440118 GTF2F1P35269 517 aaKnown RBP eCLIP22.09■■□□□ 1.137e-8■■■□□ 15.4
SHROOM1-204ENST00000440118 PBX3P40426 434 aa22.09■■□□□ 1.13
SHROOM1-204ENST00000440118 NRIP1P48552 1158 aa22.09■■□□□ 1.13
SHROOM1-204ENST00000440118 TRAPPC10P48553 1259 aa22.09■■□□□ 1.13
SHROOM1-204ENST00000440118 KRT17Q04695 432 aa22.09■■□□□ 1.13
SHROOM1-204ENST00000440118 RNASELQ05823 741 aaKnown RBP22.09■■□□□ 1.13
SHROOM1-204ENST00000440118 NCBP1Q09161 790 aaKnown RBP22.09■■□□□ 1.13
SHROOM1-204ENST00000440118 HAUS3Q68CZ6 603 aa22.09■■□□□ 1.13
SHROOM1-204ENST00000440118 KCNT2Q6UVM3 1135 aa22.09■■□□□ 1.13
SHROOM1-204ENST00000440118 ZNF598Q86UK7 904 aaKnown RBP22.09■■□□□ 1.13
SHROOM1-204ENST00000440118 LPPQ93052 612 aa22.09■■□□□ 1.13
SHROOM1-204ENST00000440118 PGBD4Q96DM1 585 aa22.09■■□□□ 1.13
SHROOM1-204ENST00000440118 TLE6Q9H808 572 aa22.09■■□□□ 1.13
SHROOM1-204ENST00000440118 TUFT1Q9NNX1 390 aa22.09■■□□□ 1.13
SHROOM1-204ENST00000440118 INO80B-WBP1J3KQ70 363 aa22.08■■□□□ 1.13
SHROOM1-204ENST00000440118 ATF7P17544 494 aaPredicted RBP22.08■■□□□ 1.13
SHROOM1-204ENST00000440118 CA8P35219 290 aa22.08■■□□□ 1.13
SHROOM1-204ENST00000440118 RARRES1P49788 294 aa22.08■■□□□ 1.13
SHROOM1-204ENST00000440118 PLPP4Q5VZY2 271 aa22.08■■□□□ 1.13
SHROOM1-204ENST00000440118 MCTP1Q6DN14 999 aa22.08■■□□□ 1.13
SHROOM1-204ENST00000440118 LRRC55Q6ZSA7 311 aa22.08■■□□□ 1.13
SHROOM1-204ENST00000440118 ADGRD2Q7Z7M1 963 aa22.08■■□□□ 1.13
SHROOM1-204ENST00000440118 URGCPQ8TCY9 931 aa22.08■■□□□ 1.13
SHROOM1-204ENST00000440118 RSPH1Q8WYR4 309 aa22.08■■□□□ 1.13
SHROOM1-204ENST00000440118 MRPS27Q92552 414 aaKnown RBP22.08■■□□□ 1.13
SHROOM1-204ENST00000440118 TRAIPQ9BWF2 469 aa22.08■■□□□ 1.13
SHROOM1-204ENST00000440118 PCDHGC5Q9Y5F6 944 aa22.08■■□□□ 1.13
SHROOM1-204ENST00000440118 GRXCR2A6NFK2 248 aa22.07■■□□□ 1.12
SHROOM1-204ENST00000440118 ZC3H11AO75152 810 aaKnown RBP eCLIP22.07■■□□□ 1.12
SHROOM1-204ENST00000440118 ALDH7A1P49419 539 aaKnown RBP22.07■■□□□ 1.12
SHROOM1-204ENST00000440118 COL19A1Q14993 1142 aa22.07■■□□□ 1.12
SHROOM1-204ENST00000440118 PDE12Q6L8Q7 609 aaKnown RBP22.07■■□□□ 1.12
SHROOM1-204ENST00000440118 TCF25Q9BQ70 676 aa22.07■■□□□ 1.12
SHROOM1-204ENST00000440118 POLR3FQ9H1D9 316 aaPredicted RBP22.07■■□□□ 1.12
SHROOM1-204ENST00000440118 MINDY3Q9H8M7 445 aa22.07■■□□□ 1.12
SHROOM1-204ENST00000440118 XPNPEP1Q9NQW7 623 aa22.07■■□□□ 1.12
SHROOM1-204ENST00000440118 SPG21Q9NZD8 308 aa22.07■■□□□ 1.12
SHROOM1-204ENST00000440118 LZTS1Q9Y250 596 aa22.07■■□□□ 1.12
SHROOM1-204ENST00000440118 PCDHB2Q9Y5E7 798 aa22.07■■□□□ 1.12
SHROOM1-204ENST00000440118 A0A087WWV3 80 aa22.06■■□□□ 1.12
SHROOM1-204ENST00000440118 FSD2A1L4K1 749 aa22.06■■□□□ 1.12
SHROOM1-204ENST00000440118 H3BQV1 296 aa22.06■■□□□ 1.12
SHROOM1-204ENST00000440118 LINC01565O15544 149 aa22.06■■□□□ 1.12
SHROOM1-204ENST00000440118 TBX10O75333 385 aa22.06■■□□□ 1.12
SHROOM1-204ENST00000440118 SRGAP2BP0DMP2 458 aa22.06■■□□□ 1.12
SHROOM1-204ENST00000440118 POTEGQ6S5H5 508 aa22.06■■□□□ 1.12
SHROOM1-204ENST00000440118 MAEAQ7L5Y9 396 aa22.06■■□□□ 1.12
SHROOM1-204ENST00000440118 CATSPER3Q86XQ3 398 aa22.06■■□□□ 1.12
SHROOM1-204ENST00000440118 EFHBQ8N7U6 833 aa22.06■■□□□ 1.12
SHROOM1-204ENST00000440118 NACC1Q96RE7 527 aa22.06■■□□□ 1.12
SHROOM1-204ENST00000440118 RAB34Q9BZG1 259 aa22.06■■□□□ 1.12
SHROOM1-204ENST00000440118 GBP3Q9H0R5 595 aa22.06■■□□□ 1.12
SHROOM1-204ENST00000440118 CD207Q9UJ71 328 aa22.06■■□□□ 1.12
SHROOM1-204ENST00000440118 GTF3C3Q9Y5Q9 886 aa22.06■■□□□ 1.12
SHROOM1-204ENST00000440118 ARHGEF35A5YM69 484 aa22.05■■□□□ 1.12
SHROOM1-204ENST00000440118 MED24O75448 989 aa22.05■■□□□ 1.12
SHROOM1-204ENST00000440118 XRCC6P12956 609 aaKnown RBP eCLIP22.05■■□□□ 1.12
SHROOM1-204ENST00000440118 MCM2P49736 904 aa22.05■■□□□ 1.12
SHROOM1-204ENST00000440118 PLCB3Q01970 1234 aa22.05■■□□□ 1.12
SHROOM1-204ENST00000440118 NBR1Q14596 966 aa22.05■■□□□ 1.12
SHROOM1-204ENST00000440118 BMS1Q14692 1282 aaKnown RBP22.05■■□□□ 1.12
SHROOM1-204ENST00000440118 PCBP1Q15365 356 aaKnown RBP eCLIP22.05■■□□□ 1.12
SHROOM1-204ENST00000440118 CTC1Q2NKJ3 1217 aa22.05■■□□□ 1.12
SHROOM1-204ENST00000440118 NOMO2Q5JPE7 1267 aa22.05■■□□□ 1.12
SHROOM1-204ENST00000440118 NOTUMQ6P988 496 aa22.05■■□□□ 1.12
SHROOM1-204ENST00000440118 MCPH1Q8NEM0 835 aa22.05■■□□□ 1.12
SHROOM1-204ENST00000440118 ASAP3Q8TDY4 903 aa22.05■■□□□ 1.12
SHROOM1-204ENST00000440118 TMEM169Q96HH4 297 aa22.05■■□□□ 1.12
SHROOM1-204ENST00000440118 TMX3Q96JJ7 454 aa22.05■■□□□ 1.12
SHROOM1-204ENST00000440118 POLR3CQ9BUI4 534 aaPredicted RBP22.05■■□□□ 1.12
SHROOM1-204ENST00000440118 TRIM6Q9C030 488 aaPredicted RBP22.05■■□□□ 1.12
SHROOM1-204ENST00000440118 CARNS1A5YM72 827 aa22.04■■□□□ 1.12
SHROOM1-204ENST00000440118 LRRIQ4A6NIV6 560 aa22.04■■□□□ 1.12
SHROOM1-204ENST00000440118 PER2O15055 1255 aa22.04■■□□□ 1.12
SHROOM1-204ENST00000440118 SPATA31C1P0DKV0 1188 aa22.04■■□□□ 1.12
SHROOM1-204ENST00000440118 LTBRP36941 435 aa22.04■■□□□ 1.12
SHROOM1-204ENST00000440118 CCT6AP40227 531 aaKnown RBP22.04■■□□□ 1.12
SHROOM1-204ENST00000440118 BCAR1P56945 870 aa22.04■■□□□ 1.12
SHROOM1-204ENST00000440118 PTENP60484 403 aa22.04■■□□□ 1.12
SHROOM1-204ENST00000440118 DLX2Q07687 328 aaPredicted RBP22.04■■□□□ 1.12
SHROOM1-204ENST00000440118 CAPSQ13938 189 aa22.04■■□□□ 1.12
SHROOM1-204ENST00000440118 TMC7Q7Z402 723 aa22.04■■□□□ 1.12
SHROOM1-204ENST00000440118 FAM178BQ8IXR5 827 aa22.04■■□□□ 1.12
SHROOM1-204ENST00000440118 FAM193BQ96PV7 902 aaPredicted RBP22.04■■□□□ 1.12
SHROOM1-204ENST00000440118 RSAD1Q9HA92 442 aa22.04■■□□□ 1.12
SHROOM1-204ENST00000440118 TDRD15B5MCY1 1934 aaKnown RBP22.04■■□□□ 1.12
SHROOM1-204ENST00000440118 CNTNAP2Q9UHC6 1331 aa22.04■■□□□ 1.12
SHROOM1-204ENST00000440118 ZNF623O75123 536 aa22.03■■□□□ 1.12
SHROOM1-204ENST00000440118 U2AF2P26368 475 aaKnown RBP eCLIP22.03■■□□□ 1.12
SHROOM1-204ENST00000440118 AXLP30530 894 aa22.03■■□□□ 1.12
SHROOM1-204ENST00000440118 ERVFC1P60507 584 aa22.03■■□□□ 1.12
SHROOM1-204ENST00000440118 ADAM15Q13444 863 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms