RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 EMC10Q5UCC4 262 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 CRELD2Q6UXH1 353 aaPredicted RBP12.56□□□□□ -0.4
SMPD4-209ENST00000439886 ZC3H18Q86VM9 953 aaKnown RBP12.56□□□□□ -0.4
SMPD4-209ENST00000439886 PROM2Q8N271 834 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 MAB21L3Q8N8X9 362 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 NSUN4Q96CB9 384 aaKnown RBP12.56□□□□□ -0.4
SMPD4-209ENST00000439886 BTBD6Q96KE9 485 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 FAM84BQ96KN1 310 aaPredicted RBP12.56□□□□□ -0.4
SMPD4-209ENST00000439886 THAP2Q9H0W7 228 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 ATP8A2Q9NTI2 1148 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 BZW2Q9Y6E2 419 aaKnown RBP12.56□□□□□ -0.4
SMPD4-209ENST00000439886 UBR1Q8IWV7 1749 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 SMNDC1O75940 238 aaKnown RBP eCLIP12.55□□□□□ -0.4
SMPD4-209ENST00000439886 TRIM49P0CI25 452 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 TRIM49CP0CI26 452 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 PON1P27169 355 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 RFC5P40937 340 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 MMP13P45452 471 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 MARCKSL1P49006 195 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 ROR2Q01974 943 aaKnown RBP12.55□□□□□ -0.4
SMPD4-209ENST00000439886 SLC35G1Q2M3R5 365 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 IRF2BP2Q7Z5L9 587 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 APBB1IPQ7Z5R6 666 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-209ENST00000439886 SFR1Q86XK3 245 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 TAB3Q8N5C8 712 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-209ENST00000439886 TLCD1Q96CP7 247 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 PIDD1Q9HB75 910 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 NKX1-2Q9UD57 310 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-209ENST00000439886 MTUS1Q9ULD2 1270 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 ADAMTSL3P82987 1691 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 NID2Q14112 1375 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 MYH7P12883 1935 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 TNS3Q68CZ2 1445 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 ANKRD62A6NC57 917 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 ADAMTS2O95450 1211 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 KRT15P19012 456 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 CNGA1P29973 690 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 CASP5P51878 434 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 KCNQ4P56696 695 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 KBTBD12Q3ZCT8 623 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 RBM26Q5T8P6 1007 aaKnown RBP12.55□□□□□ -0.4
SMPD4-209ENST00000439886 GALNT17Q6IS24 598 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 PIGWQ7Z7B1 504 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 EXOC3L1Q86VI1 746 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 DGKHQ86XP1 1220 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 C1orf131Q8NDD1 294 aaKnown RBP12.55□□□□□ -0.4
SMPD4-209ENST00000439886 RBM46Q8TBY0 533 aaKnown RBP12.55□□□□□ -0.4
SMPD4-209ENST00000439886 SCFD1Q8WVM8 642 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 KRT35Q92764 455 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 ARHGEF26Q96DR7 871 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 L3MBTL3Q96JM7 780 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-209ENST00000439886 C9orf72Q96LT7 481 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 GPR101Q96P66 508 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-209ENST00000439886 SLC5A4Q9NY91 659 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 AIPL1Q9NZN9 384 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 SUCLA2Q9P2R7 463 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-209ENST00000439886 DCTN4Q9UJW0 460 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 TMEM59LQ9UK28 342 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 DNAJC12Q9UKB3 198 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 RBAK-RBAKDNI3L0D1 243 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 CHMP2AO43633 222 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 CREB3O43889 395 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 DLATP10515 647 aaKnown RBP12.55□□□□□ -0.4
SMPD4-209ENST00000439886 DRAP1Q14919 205 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-209ENST00000439886 RASIP1Q5U651 963 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 EXOC8Q8IYI6 725 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 RPS6KC1Q96S38 1066 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 USP40Q9NVE5 1235 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 TAS2R14Q9NYV8 317 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 UBAP1Q9NZ09 502 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.55□□□□□ -0.4
SMPD4-209ENST00000439886 AFF2P51816 1311 aa12.55□□□□□ -0.4
SMPD4-209ENST00000439886 ENTPD5O75356 428 aa12.54□□□□□ -0.4
SMPD4-209ENST00000439886 FESP07332 822 aa12.54□□□□□ -0.4
SMPD4-209ENST00000439886 PAEPP09466 180 aa12.54□□□□□ -0.4
SMPD4-209ENST00000439886 MYBP10242 640 aa12.54□□□□□ -0.4
SMPD4-209ENST00000439886 ADCY8P40145 1251 aa12.54□□□□□ -0.4
SMPD4-209ENST00000439886 MAPK7Q13164 816 aa12.54□□□□□ -0.4
SMPD4-209ENST00000439886 AUHQ13825 339 aaKnown RBP12.54□□□□□ -0.4
SMPD4-209ENST00000439886 CTTNQ14247 550 aaKnown RBP12.54□□□□□ -0.4
SMPD4-209ENST00000439886 ZNF268Q14587 947 aaPredicted RBP12.54□□□□□ -0.4
SMPD4-209ENST00000439886 SLMAPQ14BN4 828 aa12.54□□□□□ -0.4
SMPD4-209ENST00000439886 C10orf76Q5T2E6 689 aa12.54□□□□□ -0.4
SMPD4-209ENST00000439886 LRRC57Q8N9N7 239 aa12.54□□□□□ -0.4
SMPD4-209ENST00000439886 SYN2Q92777 582 aaPredicted RBP12.54□□□□□ -0.4
SMPD4-209ENST00000439886 AJAP1Q9UKB5 411 aaPredicted RBP12.54□□□□□ -0.4
SMPD4-209ENST00000439886 USH1CQ9Y6N9 552 aa12.54□□□□□ -0.4
SMPD4-209ENST00000439886 BAZ2AQ9UIF9 1905 aaKnown RBP12.54□□□□□ -0.4
SMPD4-209ENST00000439886 RNF8O76064 485 aa12.54□□□□□ -0.4
SMPD4-209ENST00000439886 CBX6O95503 412 aa12.54□□□□□ -0.4
SMPD4-209ENST00000439886 LDHBP07195 334 aaKnown RBP12.54□□□□□ -0.4
SMPD4-209ENST00000439886 RCN2Q14257 317 aa12.54□□□□□ -0.4
SMPD4-209ENST00000439886 RNF220Q5VTB9 566 aa12.54□□□□□ -0.4
SMPD4-209ENST00000439886 ZNF280DQ6N043 979 aa12.54□□□□□ -0.4
SMPD4-209ENST00000439886 GSTA5Q7RTV2 222 aa12.54□□□□□ -0.4
SMPD4-209ENST00000439886 GBP7Q8N8V2 638 aaPredicted RBP12.54□□□□□ -0.4
SMPD4-209ENST00000439886 TTC8Q8TAM2 541 aa12.54□□□□□ -0.4
SMPD4-209ENST00000439886 CEP63Q96MT8 703 aa12.54□□□□□ -0.4
SMPD4-209ENST00000439886 GANQ9H2C0 597 aa12.54□□□□□ -0.4
SMPD4-209ENST00000439886 BCAS3Q9H6U6 928 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms