RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 RIMBP2O15034 1052 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 TTC4O95801 387 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 HOXD11P31277 338 aaPredicted RBP6.81□□□□□ -1.32
BDNF-211ENST00000439476 PAPOLAP51003 745 aaKnown RBP6.81□□□□□ -1.32
BDNF-211ENST00000439476 HERVK_113P62684 666 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 MDM2Q00987 491 aaPredicted RBP6.81□□□□□ -1.32
BDNF-211ENST00000439476 MESDQ14696 234 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 USH1GQ495M9 461 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 FAM160B1Q5W0V3 765 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 CACTIN-AS1Q8N1I8 211 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 ARL8AQ96BM9 186 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 DCP1AQ9NPI6 582 aaPredicted RBP6.81□□□□□ -1.32
BDNF-211ENST00000439476 ABCF3Q9NUQ8 709 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 EHD2Q9NZN4 543 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 FBXL5Q9UKA1 691 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.81□□□□□ -1.32
BDNF-211ENST00000439476 ZNF233A6NK53 670 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 TXNDC9O14530 226 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 RASGRF2O14827 1237 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 INHBAP08476 426 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 PLA2G4BP0C869 781 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 RFC1P35251 1148 aaPredicted RBP6.81□□□□□ -1.32
BDNF-211ENST00000439476 IGBP1P78318 339 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 MYL7Q01449 175 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 DLGAP5Q15398 846 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 AGAP9Q5VTM2 703 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 PODNQ7Z5L7 613 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 TMEM139Q8IV31 216 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 RNPC3Q96LT9 517 aaKnown RBP6.81□□□□□ -1.32
BDNF-211ENST00000439476 CEP295NLQ96MC4 621 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 NACC1Q96RE7 527 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 PKD2L1Q9P0L9 805 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 GCNT4Q9P109 453 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 BAG5Q9UL15 447 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 ZNF804BA4D1E1 1349 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 K7ENM7 598 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 CLIC2O15247 247 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 PLEKP08567 350 aaPredicted RBP6.8□□□□□ -1.32
BDNF-211ENST00000439476 MYBL1P10243 752 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 HARSP12081 509 aaKnown RBP6.8□□□□□ -1.32
BDNF-211ENST00000439476 BTDP43251 543 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 CASP7P55210 303 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 ESRRGP62508 458 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 TMED1Q13445 227 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 PRPSAP1Q14558 356 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 EZH2Q15910 746 aaKnown RBP6.8□□□□□ -1.32
BDNF-211ENST00000439476 CAPN12Q6ZSI9 719 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 BZW1Q7L1Q6 419 aaKnown RBP6.8□□□□□ -1.32
BDNF-211ENST00000439476 BBS5Q8N3I7 341 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 CFAP61Q8NHU2 1237 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 ACCSQ96QU6 501 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 RHBDL2Q9NX52 303 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 PPP1R9AQ9ULJ8 1098 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 ZNF148Q9UQR1 794 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 SNX24Q9Y343 169 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 AFG3L2Q9Y4W6 797 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 DLG5Q8TDM6 1919 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 SSU72P8A0A1W2PR75 194 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 ARHGAP42A6NI28 874 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 MED7O43513 233 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 IFNB1P01574 187 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 MYCLP12524 364 aaPredicted RBP6.8□□□□□ -1.32
BDNF-211ENST00000439476 ANXA13P27216 316 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 TMOD1P28289 359 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 CRKLP46109 303 aaKnown RBP6.8□□□□□ -1.32
BDNF-211ENST00000439476 DRP2Q13474 957 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 DIP2AQ14689 1571 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 GPR101Q96P66 508 aaPredicted RBP6.8□□□□□ -1.32
BDNF-211ENST00000439476 EIF2AQ9BY44 585 aaKnown RBP6.8□□□□□ -1.32
BDNF-211ENST00000439476 BARHL2Q9NY43 387 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 ANGPTL2Q9UKU9 493 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 CAPN6Q9Y6Q1 641 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 FER1L4A9Z1Z3 1794 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 RFX1P22670 979 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 APLP1P51693 650 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 KCNH2Q12809 1159 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 LLGL1Q15334 1064 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 FAM186BQ8IYM0 893 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 PPP1R14BQ96C90 147 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 CHMP6Q96FZ7 201 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 ERGIC2Q96RQ1 377 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 TMEM47Q9BQJ4 181 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 KANSL2Q9H9L4 492 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 MRPL40Q9NQ50 206 aaKnown RBP6.8□□□□□ -1.32
BDNF-211ENST00000439476 PAPOLBQ9NRJ5 636 aaKnown RBP6.8□□□□□ -1.32
BDNF-211ENST00000439476 FAM217BQ9NTX9 383 aaPredicted RBP6.8□□□□□ -1.32
BDNF-211ENST00000439476 USP40Q9NVE5 1235 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 STK32BQ9NY57 414 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 AMACRQ9UHK6 382 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 PLAGL2Q9UPG8 496 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 A0A1W2PQJ5 194 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 F8W8V4 182 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 ORC4O43929 436 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 TMEM191BP0C7N4 346 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 ZFXP17010 805 aaPredicted RBP6.8□□□□□ -1.32
BDNF-211ENST00000439476 PRDX5P30044 214 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 AARSP49588 968 aaKnown RBP eCLIP6.8□□□□□ -1.32
BDNF-211ENST00000439476 PTGISQ16647 500 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 MFSD14BQ5SR56 506 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 NUGGCQ68CJ6 796 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms