RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 CAPRIN2Q6IMN6 1127 aaKnown RBP10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 CPNE8Q86YQ8 564 aa10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 AGAP1Q9UPQ3 857 aa10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 SNED1Q8TER0 1413 aa10.72□□□□□ -0.69
CDC42SE1-202ENST00000439374 ANKRD62A6NC57 917 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 SPAG7O75391 227 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 CALCAP01258 141 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 POLR2MP0CAP2 368 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 UCHL3P15374 230 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 GCLMP48507 274 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 SKOR1P84550 965 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 GRIPAP1Q4V328 841 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 ARSHQ5FYA8 562 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 LMBR1Q8WVP7 490 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 C18orf8Q96DM3 657 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 PURBQ96QR8 312 aaKnown RBP10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 TTYH3Q9C0H2 523 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 CEP72Q9P209 647 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 CTTNBP2NLQ9P2B4 639 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 GJA3Q9Y6H8 435 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 MEIS2O14770 477 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 EDIL3O43854 480 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 SMIM24O75264 130 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 H2AFZP0C0S5 128 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 STAT1P42224 750 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 ALDH5A1P51649 535 aaPredicted RBP10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 GABPAQ06546 454 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 TMEM179Q6ZVK1 233 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 H2AFVQ71UI9 128 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 SH3BP5LQ7L8J4 393 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 PRUNE1Q86TP1 453 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 CCDC50Q8IVM0 306 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 WHAMMQ8TF30 809 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 AGBL1Q96MI9 1066 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 ASIC3Q9UHC3 531 aa10.71□□□□□ -0.69
CDC42SE1-202ENST00000439374 TRAPPC3O43617 180 aa10.71□□□□□ -0.7
CDC42SE1-202ENST00000439374 ARP10275 920 aa10.71□□□□□ -0.7
CDC42SE1-202ENST00000439374 CNGA1P29973 690 aa10.71□□□□□ -0.7
CDC42SE1-202ENST00000439374 GIT2Q14161 759 aa10.71□□□□□ -0.7
CDC42SE1-202ENST00000439374 CRY2Q49AN0 593 aa10.71□□□□□ -0.7
CDC42SE1-202ENST00000439374 PPP4R3AQ6IN85 833 aa10.71□□□□□ -0.7
CDC42SE1-202ENST00000439374 PPP1R18Q6NYC8 613 aa10.71□□□□□ -0.7
CDC42SE1-202ENST00000439374 ZNF571Q7Z3V5 609 aaPredicted RBP10.71□□□□□ -0.7
CDC42SE1-202ENST00000439374 PPM1KQ8N3J5 372 aa10.71□□□□□ -0.7
CDC42SE1-202ENST00000439374 RNF217Q8TC41 542 aa10.71□□□□□ -0.7
CDC42SE1-202ENST00000439374 DTX3LQ8TDB6 740 aa10.71□□□□□ -0.7
CDC42SE1-202ENST00000439374 BAP1Q92560 729 aa10.71□□□□□ -0.7
CDC42SE1-202ENST00000439374 IRAK4Q9NWZ3 460 aa10.71□□□□□ -0.7
CDC42SE1-202ENST00000439374 CCPG1Q9ULG6 757 aa10.71□□□□□ -0.7
CDC42SE1-202ENST00000439374 GAKO14976 1311 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 ESYT2A0FGR8 921 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 CCT8L1PA6NM43 557 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 RASSF9O75901 435 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 GH1P01241 217 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 DLATP10515 647 aaKnown RBP10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 POLD1P28340 1107 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 PSMD2Q13200 908 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 DAB2IPQ5VWQ8 1189 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 PODNQ7Z5L7 613 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 SRRM1Q8IYB3 904 aaKnown RBP10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 PROM2Q8N271 834 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 CCDC26Q8TAB7 109 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 BICD1Q96G01 975 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 KIFC3Q9BVG8 833 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 ETNK1Q9HBU6 452 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 DAAM1Q9Y4D1 1078 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 FLOT1O75955 427 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 ADRA2BP18089 450 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 MARCKSL1P49006 195 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 ZNF131P52739 623 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 DR1Q01658 176 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 SMAD1Q15797 465 aaKnown RBP10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 CCDC6Q16204 474 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 SYCP2LQ5T4T6 812 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 FAM102BQ5T8I3 360 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 CC2D2BQ6DHV5 1058 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 FMNL3Q8IVF7 1028 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 ARHGEF2Q92974 986 aaKnown RBP10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 OSBPL1AQ9BXW6 950 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 RAVER2Q9HCJ3 691 aaKnown RBP10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 DNAJC12Q9UKB3 198 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 SOX10P56693 466 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 MXRA7P84157 204 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 RRP1BQ14684 758 aaKnown RBP10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 MIER3Q7Z3K6 550 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 C1orf54Q8WWF1 131 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 CAVIN3Q969G5 261 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 ZNF341Q9BYN7 854 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 UBE2TQ9NPD8 197 aaPredicted RBP10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 GPRC5CQ9NQ84 441 aa10.7□□□□□ -0.7
CDC42SE1-202ENST00000439374 CACNA1SQ13698 1873 aa10.69□□□□□ -0.7
CDC42SE1-202ENST00000439374 KRT5P13647 590 aa10.69□□□□□ -0.7
CDC42SE1-202ENST00000439374 DRAP1Q14919 205 aaPredicted RBP10.69□□□□□ -0.7
CDC42SE1-202ENST00000439374 SLC18A3Q16572 532 aa10.69□□□□□ -0.7
CDC42SE1-202ENST00000439374 EPC2Q52LR7 807 aa10.69□□□□□ -0.7
CDC42SE1-202ENST00000439374 AP1ARQ63HQ0 302 aa10.69□□□□□ -0.7
CDC42SE1-202ENST00000439374 FAM163AQ96GL9 167 aaPredicted RBP10.69□□□□□ -0.7
CDC42SE1-202ENST00000439374 HEMGNQ9BXL5 484 aa10.69□□□□□ -0.7
CDC42SE1-202ENST00000439374 PDGFDQ9GZP0 370 aaPredicted RBP10.69□□□□□ -0.7
CDC42SE1-202ENST00000439374 ERVK-5Q9HDB9 667 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms