RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 HCSTQ9UBK5 93 aa9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 PCDHA12Q9UN75 941 aa9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 BDP1A6H8Y1 2624 aa9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 ADGRA3Q8IWK6 1321 aa9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 TDRD15B5MCY1 1934 aaKnown RBP9.55□□□□□ -0.88
HERPUD2-206ENST00000438224 A0A087WZ62 844 aa9.55□□□□□ -0.88
HERPUD2-206ENST00000438224 MARCH6O60337 910 aa9.55□□□□□ -0.88
HERPUD2-206ENST00000438224 MED24O75448 989 aa9.55□□□□□ -0.88
HERPUD2-206ENST00000438224 LYPLA2O95372 231 aa9.55□□□□□ -0.88
HERPUD2-206ENST00000438224 BAG4O95429 457 aaKnown RBP9.55□□□□□ -0.88
HERPUD2-206ENST00000438224 OR52Z1P0C646 297 aa9.55□□□□□ -0.88
HERPUD2-206ENST00000438224 DARSP14868 501 aaKnown RBP9.55□□□□□ -0.88
HERPUD2-206ENST00000438224 IBSPP21815 317 aaPredicted RBP9.55□□□□□ -0.88
HERPUD2-206ENST00000438224 EIF4BP23588 611 aaKnown RBP9.55□□□□□ -0.88
HERPUD2-206ENST00000438224 YWHABP31946 246 aaKnown RBP9.55□□□□□ -0.88
HERPUD2-206ENST00000438224 ELOAQ14241 798 aaKnown RBP9.55□□□□□ -0.88
HERPUD2-206ENST00000438224 EPC2Q52LR7 807 aa9.55□□□□□ -0.88
HERPUD2-206ENST00000438224 TPH2Q8IWU9 490 aa9.55□□□□□ -0.88
HERPUD2-206ENST00000438224 MICALL1Q8N3F8 863 aa9.55□□□□□ -0.88
HERPUD2-206ENST00000438224 TMEM143Q96AN5 459 aa9.55□□□□□ -0.88
HERPUD2-206ENST00000438224 FDXACB1Q9BRP7 624 aaPredicted RBP9.55□□□□□ -0.88
HERPUD2-206ENST00000438224 FTHL17Q9BXU8 183 aa9.55□□□□□ -0.88
HERPUD2-206ENST00000438224 PCDHB6Q9Y5E3 794 aa9.55□□□□□ -0.88
HERPUD2-206ENST00000438224 MRPL42Q9Y6G3 142 aaKnown RBP9.55□□□□□ -0.88
HERPUD2-206ENST00000438224 VCANP13611 3396 aa9.55□□□□□ -0.88
HERPUD2-206ENST00000438224 ATP9BO43861 1147 aa9.54□□□□□ -0.88
HERPUD2-206ENST00000438224 ATF7P17544 494 aaPredicted RBP9.54□□□□□ -0.88
HERPUD2-206ENST00000438224 TMOD1P28289 359 aa9.54□□□□□ -0.88
HERPUD2-206ENST00000438224 SARSP49591 514 aaKnown RBP9.54□□□□□ -0.88
HERPUD2-206ENST00000438224 EMC2Q15006 297 aa9.54□□□□□ -0.88
HERPUD2-206ENST00000438224 IL17AQ16552 155 aa9.54□□□□□ -0.88
HERPUD2-206ENST00000438224 PAN2Q504Q3 1202 aaKnown RBP9.54□□□□□ -0.88
HERPUD2-206ENST00000438224 XKR9Q5GH70 373 aa9.54□□□□□ -0.88
HERPUD2-206ENST00000438224 FAM102BQ5T8I3 360 aa9.54□□□□□ -0.88
HERPUD2-206ENST00000438224 RHPN2Q8IUC4 686 aa9.54□□□□□ -0.88
HERPUD2-206ENST00000438224 NPAS4Q8IUM7 802 aa9.54□□□□□ -0.88
HERPUD2-206ENST00000438224 TMEM192Q8IY95 271 aa9.54□□□□□ -0.88
HERPUD2-206ENST00000438224 PIGOQ8TEQ8 1089 aa9.54□□□□□ -0.88
HERPUD2-206ENST00000438224 LRRN4Q8WUT4 740 aa9.54□□□□□ -0.88
HERPUD2-206ENST00000438224 CEP170P1Q96L14 293 aa9.54□□□□□ -0.88
HERPUD2-206ENST00000438224 ZSWIM4Q9H7M6 989 aa9.54□□□□□ -0.88
HERPUD2-206ENST00000438224 MINDY3Q9H8M7 445 aa9.54□□□□□ -0.88
HERPUD2-206ENST00000438224 IFT122Q9HBG6 1241 aa9.54□□□□□ -0.88
HERPUD2-206ENST00000438224 RGS18Q9NS28 235 aa9.54□□□□□ -0.88
HERPUD2-206ENST00000438224 SUCLA2Q9P2R7 463 aaPredicted RBP9.54□□□□□ -0.88
HERPUD2-206ENST00000438224 GPR182O15218 404 aa9.53□□□□□ -0.88
HERPUD2-206ENST00000438224 FGFR1P11362 822 aa9.53□□□□□ -0.88
HERPUD2-206ENST00000438224 TECP42680 631 aa9.53□□□□□ -0.88
HERPUD2-206ENST00000438224 TRAPPC10P48553 1259 aa9.53□□□□□ -0.88
HERPUD2-206ENST00000438224 FAM189BP81408 668 aa9.53□□□□□ -0.88
HERPUD2-206ENST00000438224 ORC2Q13416 577 aaPredicted RBP9.53□□□□□ -0.88
HERPUD2-206ENST00000438224 CUL4AQ13619 759 aa9.53□□□□□ -0.88
HERPUD2-206ENST00000438224 ECM1Q16610 540 aa9.53□□□□□ -0.88
HERPUD2-206ENST00000438224 NUDT18Q6ZVK8 323 aa9.53□□□□□ -0.88
HERPUD2-206ENST00000438224 CATSPER3Q86XQ3 398 aa9.53□□□□□ -0.88
HERPUD2-206ENST00000438224 FIBCD1Q8N539 461 aa9.53□□□□□ -0.88
HERPUD2-206ENST00000438224 ASAP3Q8TDY4 903 aa9.53□□□□□ -0.88
HERPUD2-206ENST00000438224 TSC1Q92574 1164 aa9.53□□□□□ -0.88
HERPUD2-206ENST00000438224 CLP1Q92989 425 aaKnown RBP9.53□□□□□ -0.88
HERPUD2-206ENST00000438224 NLRP4Q96MN2 994 aa9.53□□□□□ -0.88
HERPUD2-206ENST00000438224 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.53□□□□□ -0.88
HERPUD2-206ENST00000438224 COL4A3BPQ9Y5P4 624 aa9.53□□□□□ -0.88
HERPUD2-206ENST00000438224 DENND3A2RUS2 1198 aa9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 PP2D1A8MPX8 630 aa9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 C5orf67F2Z3F1 127 aa9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 H3BNC9 293 aa9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 GRM6O15303 877 aa9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 DKC1O60832 514 aaKnown RBP eCLIP9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 CDK11BP21127 795 aaKnown RBP9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 CTNNB1P35222 781 aa9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 MCM2P49736 904 aa9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 RARRES1P49788 294 aa9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 POLGP54098 1239 aaPredicted RBP9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 TFF2Q03403 129 aa9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 LAMTOR4Q0VGL1 99 aa9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 GPM6BQ13491 265 aa9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 CAMK1Q14012 370 aa9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 BTG3Q14201 252 aaPredicted RBP9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 CLLU1OSQ5K130 101 aa9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 MCTP1Q6DN14 999 aa9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 SLC24A5Q71RS6 500 aa9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 ZNF598Q86UK7 904 aaKnown RBP9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 FERMT3Q86UX7 667 aa9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 ZNF410Q86VK4 478 aa9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 ECHDC2Q86YB7 292 aa9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 CMTR2Q8IYT2 770 aaKnown RBP9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 NEK9Q8TD19 979 aa9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 PRPF31Q8WWY3 499 aaKnown RBP9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 SCLT1Q96NL6 688 aa9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 GCOM2Q9BZD3 368 aaPredicted RBP9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 GPRC5CQ9NQ84 441 aa9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 C1orf112Q9NSG2 853 aa9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 ANKEF1Q9NU02 776 aa9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 PCDHGC3Q9UN70 934 aa9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 SMC3Q9UQE7 1217 aa9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 XIRP2A4UGR9 3374 aa9.52□□□□□ -0.89
HERPUD2-206ENST00000438224 MEIS3P2A8K0S8 358 aa9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 USO1O60763 962 aaKnown RBP9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 STAG3L1P0CL83 205 aa9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 SRGAP2CP0DJJ0 459 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms