RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 MCMDC2Q4G0Z9 681 aa9.73□□□□□ -0.85
NIF3L1-208ENST00000436412 IQCA1Q86XH1 822 aa9.73□□□□□ -0.85
NIF3L1-208ENST00000436412 EFHBQ8N7U6 833 aa9.73□□□□□ -0.85
NIF3L1-208ENST00000436412 SMRP1Q8NCR6 262 aa9.73□□□□□ -0.85
NIF3L1-208ENST00000436412 AMNQ9BXJ7 453 aa9.73□□□□□ -0.85
NIF3L1-208ENST00000436412 CPVLQ9H3G5 476 aa9.73□□□□□ -0.85
NIF3L1-208ENST00000436412 IGFLR1Q9H665 355 aa9.73□□□□□ -0.85
NIF3L1-208ENST00000436412 KAT14Q9H8E8 782 aa9.73□□□□□ -0.85
NIF3L1-208ENST00000436412 RC3H2Q9HBD1 1191 aaKnown RBP9.73□□□□□ -0.85
NIF3L1-208ENST00000436412 CCDC171Q6TFL3 1326 aa9.73□□□□□ -0.85
NIF3L1-208ENST00000436412 ATG2AQ2TAZ0 1938 aa9.72□□□□□ -0.85
NIF3L1-208ENST00000436412 CACNA1GO43497 2377 aa9.72□□□□□ -0.85
NIF3L1-208ENST00000436412 MYO10Q9HD67 2058 aa9.72□□□□□ -0.85
NIF3L1-208ENST00000436412 FSD2A1L4K1 749 aa9.72□□□□□ -0.85
NIF3L1-208ENST00000436412 NOP56O00567 594 aaKnown RBP9.72□□□□□ -0.85
NIF3L1-208ENST00000436412 DHX16O60231 1041 aaKnown RBP9.72□□□□□ -0.85
NIF3L1-208ENST00000436412 PARP1P09874 1014 aaKnown RBP9.72□□□□□ -0.85
NIF3L1-208ENST00000436412 CCND2P30279 289 aa9.72□□□□□ -0.85
NIF3L1-208ENST00000436412 SP2Q02086 613 aa9.72□□□□□ -0.85
NIF3L1-208ENST00000436412 BTG3Q14201 252 aaPredicted RBP9.72□□□□□ -0.85
NIF3L1-208ENST00000436412 NEDD9Q14511 834 aa9.72□□□□□ -0.85
NIF3L1-208ENST00000436412 PGM5Q15124 567 aa9.72□□□□□ -0.85
NIF3L1-208ENST00000436412 GNPTABQ3T906 1256 aa9.72□□□□□ -0.85
NIF3L1-208ENST00000436412 TAF2Q6P1X5 1199 aa9.72□□□□□ -0.85
NIF3L1-208ENST00000436412 ZNF689Q96CS4 500 aaPredicted RBP9.72□□□□□ -0.85
NIF3L1-208ENST00000436412 EHMT1Q9H9B1 1298 aa9.72□□□□□ -0.85
NIF3L1-208ENST00000436412 JMJD4Q9H9V9 463 aa9.72□□□□□ -0.85
NIF3L1-208ENST00000436412 ZNF215Q9UL58 517 aaPredicted RBP9.72□□□□□ -0.85
NIF3L1-208ENST00000436412 PLAGL2Q9UPG8 496 aa9.72□□□□□ -0.85
NIF3L1-208ENST00000436412 BAZ2BQ9UIF8 2168 aaKnown RBP9.72□□□□□ -0.85
NIF3L1-208ENST00000436412 FAM229AH3BQW9 127 aa9.71□□□□□ -0.86
NIF3L1-208ENST00000436412 ENPP3O14638 875 aa9.71□□□□□ -0.86
NIF3L1-208ENST00000436412 STAM2O75886 525 aa9.71□□□□□ -0.86
NIF3L1-208ENST00000436412 RPLP2P05387 115 aaKnown RBP9.71□□□□□ -0.86
NIF3L1-208ENST00000436412 ATF7P17544 494 aaPredicted RBP9.71□□□□□ -0.86
NIF3L1-208ENST00000436412 GTF2F1P35269 517 aaKnown RBP eCLIP9.71□□□□□ -0.86
NIF3L1-208ENST00000436412 MFAP1P55081 439 aaKnown RBP9.71□□□□□ -0.86
NIF3L1-208ENST00000436412 RRP1P56182 461 aaKnown RBP9.71□□□□□ -0.86
NIF3L1-208ENST00000436412 HAND2P61296 217 aa9.71□□□□□ -0.86
NIF3L1-208ENST00000436412 ADAM17P78536 824 aa9.71□□□□□ -0.86
NIF3L1-208ENST00000436412 CAMK1Q14012 370 aa9.71□□□□□ -0.86
NIF3L1-208ENST00000436412 METTL7BQ6UX53 244 aa9.71□□□□□ -0.86
NIF3L1-208ENST00000436412 RSPH3Q86UC2 560 aa9.71□□□□□ -0.86
NIF3L1-208ENST00000436412 FAM200AQ8TCP9 573 aa9.71□□□□□ -0.86
NIF3L1-208ENST00000436412 OTUD7AQ8TE49 926 aaPredicted RBP9.71□□□□□ -0.86
NIF3L1-208ENST00000436412 MYO19Q96H55 970 aa9.71□□□□□ -0.86
NIF3L1-208ENST00000436412 PHF7Q9BWX1 381 aaPredicted RBP9.71□□□□□ -0.86
NIF3L1-208ENST00000436412 OSBPL7Q9BZF2 842 aa9.71□□□□□ -0.86
NIF3L1-208ENST00000436412 ALG13Q9NP73 1137 aaKnown RBP9.71□□□□□ -0.86
NIF3L1-208ENST00000436412 SETD4Q9NVD3 440 aa9.71□□□□□ -0.86
NIF3L1-208ENST00000436412 CLEC1BQ9P126 229 aa9.71□□□□□ -0.86
NIF3L1-208ENST00000436412 RCAN3Q9UKA8 241 aa9.71□□□□□ -0.86
NIF3L1-208ENST00000436412 SLC6A14Q9UN76 642 aa9.71□□□□□ -0.86
NIF3L1-208ENST00000436412 NRCAMQ92823 1304 aa9.71□□□□□ -0.86
NIF3L1-208ENST00000436412 PROB1E7EW31 1015 aa9.7□□□□□ -0.86
NIF3L1-208ENST00000436412 GCOM1H8Y6P7 765 aaPredicted RBP9.7□□□□□ -0.86
NIF3L1-208ENST00000436412 OPLAHO14841 1288 aa9.7□□□□□ -0.86
NIF3L1-208ENST00000436412 ZBTB5O15062 677 aa9.7□□□□□ -0.86
NIF3L1-208ENST00000436412 LINC01565O15544 149 aa9.7□□□□□ -0.86
NIF3L1-208ENST00000436412 DGKIO75912 1065 aa9.7□□□□□ -0.86
NIF3L1-208ENST00000436412 CHRNA1P02708 482 aa9.7□□□□□ -0.86
NIF3L1-208ENST00000436412 POLR2MP0CAP2 368 aa9.7□□□□□ -0.86
NIF3L1-208ENST00000436412 AVPR2P30518 371 aa9.7□□□□□ -0.86
NIF3L1-208ENST00000436412 ICAM3P32942 547 aa9.7□□□□□ -0.86
NIF3L1-208ENST00000436412 IDH3AP50213 366 aa9.7□□□□□ -0.86
NIF3L1-208ENST00000436412 CCINQ13939 588 aa9.7□□□□□ -0.86
NIF3L1-208ENST00000436412 FAM43BQ6ZT52 329 aaPredicted RBP9.7□□□□□ -0.86
NIF3L1-208ENST00000436412 TBC1D10CQ8IV04 446 aa9.7□□□□□ -0.86
NIF3L1-208ENST00000436412 CMTR2Q8IYT2 770 aaKnown RBP9.7□□□□□ -0.86
NIF3L1-208ENST00000436412 SPPL3Q8TCT6 385 aa9.7□□□□□ -0.86
NIF3L1-208ENST00000436412 ATOH1Q92858 354 aaPredicted RBP9.7□□□□□ -0.86
NIF3L1-208ENST00000436412 ZKSCAN3Q9BRR0 538 aa9.7□□□□□ -0.86
NIF3L1-208ENST00000436412 VAT1LQ9HCJ6 419 aa9.7□□□□□ -0.86
NIF3L1-208ENST00000436412 NAGPAQ9UK23 515 aa9.7□□□□□ -0.86
NIF3L1-208ENST00000436412 LRFN2Q9ULH4 789 aa9.7□□□□□ -0.86
NIF3L1-208ENST00000436412 ZMIZ1Q9ULJ6 1067 aa9.7□□□□□ -0.86
NIF3L1-208ENST00000436412 USP15Q9Y4E8 981 aaPredicted RBP9.7□□□□□ -0.86
NIF3L1-208ENST00000436412 PCDHA1Q9Y5I3 950 aa9.7□□□□□ -0.86
NIF3L1-208ENST00000436412 A0A0D9SFI3 127 aa9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 ZNF213O14771 459 aa9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 SORBS3O60504 671 aa9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 FRYLO94915 3013 aa9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 ITGB1P05556 798 aa9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 GHRP10912 638 aa9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 ITGB7P26010 798 aa9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 HOXA13P31271 388 aaPredicted RBP9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 NEDD4P46934 1319 aa9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 ARHGAP4P98171 946 aa9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 LPIN1Q14693 890 aa9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 C20orf194Q5TEA3 1177 aa9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 KMT2EQ8IZD2 1858 aa9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 ENAHQ8N8S7 591 aaPredicted RBP9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 IL31RAQ8NI17 732 aa9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 LMBR1Q8WVP7 490 aa9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 MTMR8Q96EF0 704 aa9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 ASIC4Q96FT7 647 aa9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 FAM227BQ96M60 508 aa9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 INPP4AQ96PE3 977 aaPredicted RBP9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 GPR20Q99678 358 aa9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 SENP7Q9BQF6 1050 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms