RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 CCDC194A0A1B0GVG4 234 aa8.71□□□□□ -1.02
VPS50-203ENST00000436177 DDX11L8A8MPP1 907 aa8.71□□□□□ -1.02
VPS50-203ENST00000436177 ZNF862O60290 1169 aa8.71□□□□□ -1.02
VPS50-203ENST00000436177 DKC1O60832 514 aaKnown RBP eCLIP8.71□□□□□ -1.02
VPS50-203ENST00000436177 EOMESO95936 686 aa8.71□□□□□ -1.02
VPS50-203ENST00000436177 NEFLP07196 543 aa8.71□□□□□ -1.02
VPS50-203ENST00000436177 SKIP12755 728 aa8.71□□□□□ -1.02
VPS50-203ENST00000436177 TECP42680 631 aa8.71□□□□□ -1.02
VPS50-203ENST00000436177 GPC3P51654 580 aa8.71□□□□□ -1.02
VPS50-203ENST00000436177 FAM189BP81408 668 aa8.71□□□□□ -1.02
VPS50-203ENST00000436177 RNASELQ05823 741 aaKnown RBP8.71□□□□□ -1.02
VPS50-203ENST00000436177 STK3Q13188 491 aa8.71□□□□□ -1.02
VPS50-203ENST00000436177 DSC3Q14574 896 aa8.71□□□□□ -1.02
VPS50-203ENST00000436177 SMC1AQ14683 1233 aaKnown RBP8.71□□□□□ -1.02
VPS50-203ENST00000436177 NONOQ15233 471 aaKnown RBP eCLIP8.71□□□□□ -1.02
VPS50-203ENST00000436177 UGCGQ16739 394 aa8.71□□□□□ -1.02
VPS50-203ENST00000436177 DUSP6Q16828 381 aa8.71□□□□□ -1.02
VPS50-203ENST00000436177 CES5AQ6NT32 575 aa8.71□□□□□ -1.02
VPS50-203ENST00000436177 LLGL2Q6P1M3 1020 aa8.71□□□□□ -1.02
VPS50-203ENST00000436177 HFE2Q6ZVN8 426 aa8.71□□□□□ -1.02
VPS50-203ENST00000436177 RUFY3Q7L099 469 aa8.71□□□□□ -1.02
VPS50-203ENST00000436177 ECHDC2Q86YB7 292 aa8.71□□□□□ -1.02
VPS50-203ENST00000436177 BLIDQ8IZY5 108 aa8.71□□□□□ -1.02
VPS50-203ENST00000436177 FBXL16Q8N461 479 aa8.71□□□□□ -1.02
VPS50-203ENST00000436177 SPRYD3Q8NCJ5 442 aa8.71□□□□□ -1.02
VPS50-203ENST00000436177 SLC7A3Q8WY07 619 aa8.71□□□□□ -1.02
VPS50-203ENST00000436177 CASP10Q92851 521 aa8.71□□□□□ -1.02
VPS50-203ENST00000436177 TATDN2Q93075 761 aa8.71□□□□□ -1.02
VPS50-203ENST00000436177 INO80BQ9C086 356 aaPredicted RBP8.71□□□□□ -1.02
VPS50-203ENST00000436177 ADAMTS10Q9H324 1103 aa8.71□□□□□ -1.02
VPS50-203ENST00000436177 TSHZ2Q9NRE2 1034 aa8.71□□□□□ -1.02
VPS50-203ENST00000436177 CLEC1BQ9P126 229 aa8.71□□□□□ -1.02
VPS50-203ENST00000436177 DDX25Q9UHL0 483 aaKnown RBP8.71□□□□□ -1.02
VPS50-203ENST00000436177 PIN4Q9Y237 131 aaKnown RBP8.71□□□□□ -1.02
VPS50-203ENST00000436177 A0A0U1RQF3 1178 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 TMEM221A6NGB7 291 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 M0R296 226 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 ADAMTS3O15072 1205 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 GFRA3O60609 400 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 ZC3H11AO75152 810 aaKnown RBP eCLIP8.7□□□□□ -1.02
VPS50-203ENST00000436177 TDP2O95551 362 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 GLP2RO95838 553 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 GCFC2P16383 781 aaKnown RBP8.7□□□□□ -1.02
VPS50-203ENST00000436177 HOXB8P17481 243 aaPredicted RBP8.7□□□□□ -1.02
VPS50-203ENST00000436177 ATF7P17544 494 aaPredicted RBP8.7□□□□□ -1.02
VPS50-203ENST00000436177 PBX3P40426 434 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 RAB27AP51159 221 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 ERVFC1P60507 584 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 PSMC5P62195 406 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 PLCB3Q01970 1234 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 CBX2Q14781 532 aaPredicted RBP8.7□□□□□ -1.02
VPS50-203ENST00000436177 E2F4Q16254 413 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 NTRK3Q16288 839 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 Q4G0T1 1027 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 CATSPER4Q7RTX7 472 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 ZNF410Q86VK4 478 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 RHPN2Q8IUC4 686 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 EXOC8Q8IYI6 725 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 URGCPQ8TCY9 931 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 HELQQ8TDG4 1101 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 EDAQ92838 391 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 PBXIP1Q96AQ6 731 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 NLRP4Q96MN2 994 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 CCDC43Q96MW1 224 aaKnown RBP8.7□□□□□ -1.02
VPS50-203ENST00000436177 NAP1L4Q99733 375 aaKnown RBP8.7□□□□□ -1.02
VPS50-203ENST00000436177 AGXT2Q9BYV1 514 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 CWH43Q9H720 699 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 BRMS1Q9HCU9 246 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 CHST12Q9NRB3 414 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 PDRG1Q9NUG6 133 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 SUCLA2Q9P2R7 463 aaPredicted RBP8.7□□□□□ -1.02
VPS50-203ENST00000436177 INPP5FQ9Y2H2 1132 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 NR2E1Q9Y466 385 aa8.7□□□□□ -1.02
VPS50-203ENST00000436177 CACNA1HO95180 2353 aa8.69□□□□□ -1.02
VPS50-203ENST00000436177 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.69□□□□□ -1.02
VPS50-203ENST00000436177 LOC730098B7Z3J9 87 aa8.69□□□□□ -1.02
VPS50-203ENST00000436177 FSCN2O14926 492 aa8.69□□□□□ -1.02
VPS50-203ENST00000436177 EPB41L2O43491 1005 aaKnown RBP8.69□□□□□ -1.02
VPS50-203ENST00000436177 PSMD10O75832 226 aa8.69□□□□□ -1.02
VPS50-203ENST00000436177 FGFR4P22455 802 aa8.69□□□□□ -1.02
VPS50-203ENST00000436177 POLGP54098 1239 aaPredicted RBP8.69□□□□□ -1.02
VPS50-203ENST00000436177 EVCP57679 992 aa8.69□□□□□ -1.02
VPS50-203ENST00000436177 INF2Q27J81 1249 aa8.69□□□□□ -1.02
VPS50-203ENST00000436177 LETM2Q2VYF4 491 aa8.69□□□□□ -1.02
VPS50-203ENST00000436177 CLLU1OSQ5K130 101 aa8.69□□□□□ -1.02
VPS50-203ENST00000436177 ANKRD54Q6NXT1 300 aa8.69□□□□□ -1.02
VPS50-203ENST00000436177 MOXD1Q6UVY6 613 aa8.69□□□□□ -1.02
VPS50-203ENST00000436177 TRIM67Q6ZTA4 783 aa8.69□□□□□ -1.02
VPS50-203ENST00000436177 LINC01465Q8N7H1 131 aa8.69□□□□□ -1.02
VPS50-203ENST00000436177 DAGLBQ8NCG7 672 aa8.69□□□□□ -1.02
VPS50-203ENST00000436177 WASF1Q92558 559 aa8.69□□□□□ -1.02
VPS50-203ENST00000436177 GJA10Q969M2 543 aa8.69□□□□□ -1.02
VPS50-203ENST00000436177 ZNF274Q96GC6 653 aaPredicted RBP8.69□□□□□ -1.02
VPS50-203ENST00000436177 FAM20AQ96MK3 541 aa8.69□□□□□ -1.02
VPS50-203ENST00000436177 NECTIN4Q96NY8 510 aa8.69□□□□□ -1.02
VPS50-203ENST00000436177 CASD1Q96PB1 797 aa8.69□□□□□ -1.02
VPS50-203ENST00000436177 MTRQ99707 1265 aa8.69□□□□□ -1.02
VPS50-203ENST00000436177 PRRX2Q99811 253 aa8.69□□□□□ -1.02
VPS50-203ENST00000436177 APOL5Q9BWW9 433 aa8.69□□□□□ -1.02
VPS50-203ENST00000436177 PRKD2Q9BZL6 878 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms