RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 SKOR1P84550 965 aa11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 CEP85LQ5SZL2 805 aa11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 STYK1Q6J9G0 422 aa11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 AADACL2Q6P093 401 aa11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 WHAMMQ8TF30 809 aa11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 NACC1Q96RE7 527 aa11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 WDR11Q9BZH6 1224 aa11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 SEPT11Q9NVA2 429 aaKnown RBP11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 SUCLA2Q9P2R7 463 aaPredicted RBP11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 APEX2Q9UBZ4 518 aa11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 ZEB2O60315 1214 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 HSPA9P38646 679 aaKnown RBP11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 PEX19P40855 299 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 GSCP56915 257 aaPredicted RBP11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 ZNF211Q13398 564 aaPredicted RBP11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 NAA25Q14CX7 972 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 IFI16Q16666 785 aaKnown RBP11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 MAATS1Q7Z4T9 603 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 RASGEF1CQ8N431 466 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 STRA6Q9BX79 667 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 ACP6Q9NPH0 428 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 ZNF70Q9UC06 446 aaPredicted RBP11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 FAM169AQ9Y6X4 670 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 A0A0A6YYK5 440 aaPredicted RBP11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 BHMG1C9JSJ3 638 aaPredicted RBP11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 NFIBO00712 420 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 FGGP02679 453 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 PAX7P23759 505 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 PPATQ06203 517 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 BFSP1Q12934 665 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 NFIL3Q16649 462 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 SYCP3Q8IZU3 236 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 KIRREL3Q8IZU9 778 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 KAT5Q92993 513 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 CBWD1Q9BRT8 395 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 MKNK1Q9BUB5 465 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 VCPKMTQ9H867 229 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 GOPCQ9HD26 462 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 FRMD4BQ9Y2L6 1034 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 H0YGN5 161 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 TULP1O00294 542 aaPredicted RBP11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 PLSCR1O15162 318 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 DDX3YO15523 660 aaKnown RBP11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 PPP1R12BO60237 982 aaPredicted RBP11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 CDR1P51861 262 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 CLNS1AP54105 237 aaKnown RBP11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 MYL7Q01449 175 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 PPP3CAQ08209 521 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 SPP2Q13103 211 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 ARHGEF19Q8IW93 802 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 PLEKHO2Q8TD55 490 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 KAT2BQ92831 832 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 ELMO3Q96BJ8 720 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 TRIM51Q9BSJ1 452 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 TRIM31Q9BZY9 425 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 DPH5Q9H2P9 285 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 ERVK-5Q9HDB9 667 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 KCNH7Q9NS40 1196 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 NFS1Q9Y697 457 aa11.28□□□□□ -0.6
CLSTN1-203ENST00000435891 ARHGEF35A5YM69 484 aa11.27□□□□□ -0.6
CLSTN1-203ENST00000435891 PRPF4BQ13523 1007 aaKnown RBP11.27□□□□□ -0.6
CLSTN1-203ENST00000435891 PADI6Q6TGC4 694 aa11.27□□□□□ -0.6
CLSTN1-203ENST00000435891 OTUD6BQ8N6M0 293 aa11.27□□□□□ -0.6
CLSTN1-203ENST00000435891 RFFLQ8WZ73 363 aa11.27□□□□□ -0.6
CLSTN1-203ENST00000435891 ODF2LQ9ULJ1 636 aa11.27□□□□□ -0.6
CLSTN1-203ENST00000435891 K7ENM7 598 aa11.27□□□□□ -0.61
CLSTN1-203ENST00000435891 POU5F1Q01860 360 aaKnown RBP11.27□□□□□ -0.61
CLSTN1-203ENST00000435891 ITGB3BPQ13352 177 aaPredicted RBP11.27□□□□□ -0.61
CLSTN1-203ENST00000435891 NEDD9Q14511 834 aa11.27□□□□□ -0.61
CLSTN1-203ENST00000435891 ZNF746Q6NUN9 644 aaPredicted RBP11.27□□□□□ -0.61
CLSTN1-203ENST00000435891 CD302Q8IX05 232 aa11.27□□□□□ -0.61
CLSTN1-203ENST00000435891 ALG3Q92685 438 aa11.27□□□□□ -0.61
CLSTN1-203ENST00000435891 TEKT3Q9BXF9 490 aa11.27□□□□□ -0.61
CLSTN1-203ENST00000435891 TMOD4Q9NZQ9 345 aa11.27□□□□□ -0.61
CLSTN1-203ENST00000435891 AMFRQ9UKV5 643 aa11.27□□□□□ -0.61
CLSTN1-203ENST00000435891 INTUQ9ULD6 942 aa11.27□□□□□ -0.61
CLSTN1-203ENST00000435891 MRPL11Q9Y3B7 192 aaKnown RBP11.27□□□□□ -0.61
CLSTN1-203ENST00000435891 ZNF536O15090 1300 aa11.27□□□□□ -0.61
CLSTN1-203ENST00000435891 EMSYQ7Z589 1322 aa11.27□□□□□ -0.61
CLSTN1-203ENST00000435891 DHX15O43143 795 aaKnown RBP11.27□□□□□ -0.61
CLSTN1-203ENST00000435891 NR1D1P20393 614 aa11.27□□□□□ -0.61
CLSTN1-203ENST00000435891 HPDP32754 393 aaPredicted RBP11.27□□□□□ -0.61
CLSTN1-203ENST00000435891 GCLMP48507 274 aa11.27□□□□□ -0.61
CLSTN1-203ENST00000435891 SEC24CP53992 1094 aa11.27□□□□□ -0.61
CLSTN1-203ENST00000435891 C1orf220Q5T0J3 134 aa11.27□□□□□ -0.61
CLSTN1-203ENST00000435891 CHURC1Q8WUH1 139 aa11.27□□□□□ -0.61
CLSTN1-203ENST00000435891 ATP6V1G3Q96LB4 118 aa11.27□□□□□ -0.61
CLSTN1-203ENST00000435891 MXRA8Q9BRK3 442 aa11.27□□□□□ -0.61
CLSTN1-203ENST00000435891 CD248Q9HCU0 757 aa11.27□□□□□ -0.61
CLSTN1-203ENST00000435891 GPRC5CQ9NQ84 441 aa11.27□□□□□ -0.61
CLSTN1-203ENST00000435891 SEL1LQ9UBV2 794 aa11.27□□□□□ -0.61
CLSTN1-203ENST00000435891 ZHX2Q9Y6X8 837 aa11.27□□□□□ -0.61
CLSTN1-203ENST00000435891 IRF6O14896 467 aa11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 TMEM253P0C7T8 217 aa11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 LMNB1P20700 586 aa11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 ANXA13P27216 316 aa11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 MARCKSL1P49006 195 aa11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 ACTN3Q08043 901 aaPredicted RBP11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 CPNE8Q86YQ8 564 aa11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 FAM151AQ8WW52 585 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms