RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 ZNF268Q14587 947 aaPredicted RBP7.96□□□□□ -1.13
SYNPO2-203ENST00000434046 TRIP13Q15645 432 aaPredicted RBP7.96□□□□□ -1.13
SYNPO2-203ENST00000434046 KIAA1755Q5JYT7 1200 aa7.96□□□□□ -1.13
SYNPO2-203ENST00000434046 FBXO11Q86XK2 927 aa7.96□□□□□ -1.13
SYNPO2-203ENST00000434046 VPS52Q8N1B4 723 aa7.96□□□□□ -1.13
SYNPO2-203ENST00000434046 GUF1Q8N442 669 aaKnown RBP7.96□□□□□ -1.13
SYNPO2-203ENST00000434046 TEX9Q8N6V9 391 aa7.96□□□□□ -1.13
SYNPO2-203ENST00000434046 DTX3LQ8TDB6 740 aa7.96□□□□□ -1.13
SYNPO2-203ENST00000434046 AK8Q96MA6 479 aa7.96□□□□□ -1.13
SYNPO2-203ENST00000434046 ERP44Q9BS26 406 aa7.96□□□□□ -1.13
SYNPO2-203ENST00000434046 MTFR1LQ9H019 292 aa7.96□□□□□ -1.13
SYNPO2-203ENST00000434046 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.96□□□□□ -1.13
SYNPO2-203ENST00000434046 LRRC4BQ9NT99 713 aa7.96□□□□□ -1.13
SYNPO2-203ENST00000434046 ADAM22Q9P0K1 906 aa7.96□□□□□ -1.13
SYNPO2-203ENST00000434046 DDX25Q9UHL0 483 aaKnown RBP7.96□□□□□ -1.13
SYNPO2-203ENST00000434046 HAO1Q9UJM8 370 aa7.96□□□□□ -1.13
SYNPO2-203ENST00000434046 PCDHGC5Q9Y5F6 944 aa7.96□□□□□ -1.13
SYNPO2-203ENST00000434046 NFS1Q9Y697 457 aa7.96□□□□□ -1.13
SYNPO2-203ENST00000434046 COL18A1P39060 1754 aa7.96□□□□□ -1.13
SYNPO2-203ENST00000434046 THAP12O43422 761 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 SPOPO43791 374 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 RARAP10276 462 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 SKIP12755 728 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 SLC9A1P19634 815 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 STAT1P42224 750 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 SERPINB4P48594 390 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 RASSF2P50749 326 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 KCNMA1Q12791 1236 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 UBE2SQ16763 222 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 CENPPQ6IPU0 288 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 RFX8Q6ZV50 586 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 APBB1IPQ7Z5R6 666 aaPredicted RBP7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 MFN1Q8IWA4 741 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 L3MBTL3Q96JM7 780 aaPredicted RBP7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 C7orf25Q9BPX7 421 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 CCDC77Q9BR77 488 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 TDRD3Q9H7E2 651 aaKnown RBP7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 RIC8AQ9NPQ8 531 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 MTUS1Q9ULD2 1270 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 SLC12A4Q9UP95 1085 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 PKD1L3Q7Z443 1732 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 CHMP2AO43633 222 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 TLR2O60603 784 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 XRCC5P13010 732 aaKnown RBP7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 RAB27AP51159 221 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 ROR2Q01974 943 aaKnown RBP7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 C11orf91Q3C1V1 193 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 RNF220Q5VTB9 566 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 HGSNATQ68CP4 663 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 JAMLQ86YT9 394 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 SCYL3Q8IZE3 742 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 TPCN2Q8NHX9 752 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 ACTRT1Q8TDG2 376 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 LRRC37BQ96QE4 947 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 EDEM3Q9BZQ6 932 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 PARP2Q9UGN5 583 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 SUGT1Q9Y2Z0 365 aa7.96□□□□□ -1.14
SYNPO2-203ENST00000434046 hCG_1984214I3L0E3 225 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 ECE2O60344 883 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 PYGLP06737 847 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 PAEPP09466 180 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 LINGO3P0C6S8 592 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 CHRNA5P30532 468 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 PRR16Q569H4 304 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 EMC10Q5UCC4 262 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 CDCA2Q69YH5 1023 aaPredicted RBP7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 CWF19L1Q69YN2 538 aaKnown RBP7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 CCDC174Q6PII3 467 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 C16orf86Q6ZW13 317 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 SYCP3Q8IZU3 236 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 CPXCR1Q8N123 301 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 UBL4BQ8N7F7 174 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 ZNF713Q8N859 430 aaPredicted RBP7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 PIGOQ8TEQ8 1089 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 SCFD2Q8WU76 684 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 AMNQ9BXJ7 453 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 RTFDC1Q9BY42 306 aaPredicted RBP7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 ADAM33Q9BZ11 813 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 PCDHA6Q9UN73 950 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 PCDHA8Q9Y5H6 950 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 GJA3Q9Y6H8 435 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 MYH6P13533 1939 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 PNMA6FA0A0J9YX94 578 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 FOXO6A8MYZ6 492 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 CREB3O43889 395 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 PFDN1O60925 122 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 KRT15P19012 456 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 KCNA3P22001 575 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 KCNJ1P48048 391 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 MESDQ14696 234 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 AOC3Q16853 763 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 SEPT14Q6ZU15 432 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 STXBP4Q6ZWJ1 553 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 ZNF571Q7Z3V5 609 aaPredicted RBP7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 GPBP1Q86WP2 473 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 GLYCTKQ8IVS8 523 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 TNFRSF25Q93038 417 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 DYDC2Q96IM9 177 aa7.95□□□□□ -1.14
SYNPO2-203ENST00000434046 ZNF317Q96PQ6 595 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms