RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 ARHGAP39Q9C0H5 1083 aa8.03□□□□□ -1.12
PTPRK-211ENST00000429595 MYRFQ9Y2G1 1151 aa8.03□□□□□ -1.12
PTPRK-211ENST00000429595 SUGT1Q9Y2Z0 365 aa8.03□□□□□ -1.12
PTPRK-211ENST00000429595 TLR2O60603 784 aa8.02□□□□□ -1.13
PTPRK-211ENST00000429595 PLS3P13797 630 aa8.02□□□□□ -1.13
PTPRK-211ENST00000429595 MYL6BP14649 208 aa8.02□□□□□ -1.13
PTPRK-211ENST00000429595 PSMC4P43686 418 aa8.02□□□□□ -1.13
PTPRK-211ENST00000429595 ADAM17P78536 824 aa8.02□□□□□ -1.13
PTPRK-211ENST00000429595 TTLL7Q6ZT98 887 aa8.02□□□□□ -1.13
PTPRK-211ENST00000429595 OPTNQ96CV9 577 aa8.02□□□□□ -1.13
PTPRK-211ENST00000429595 DEFB118Q96PH6 123 aa8.02□□□□□ -1.13
PTPRK-211ENST00000429595 GPRC5CQ9NQ84 441 aa8.02□□□□□ -1.13
PTPRK-211ENST00000429595 FAM205AQ6ZU69 1335 aa8.02□□□□□ -1.13
PTPRK-211ENST00000429595 MYPNQ86TC9 1320 aa8.02□□□□□ -1.13
PTPRK-211ENST00000429595 TRBV23OR9-2A0A075B6M9 112 aa8.01□□□□□ -1.13
PTPRK-211ENST00000429595 UFL1O94874 794 aa8.01□□□□□ -1.13
PTPRK-211ENST00000429595 CYP2C8P10632 490 aa8.01□□□□□ -1.13
PTPRK-211ENST00000429595 MMP14P50281 582 aa8.01□□□□□ -1.13
PTPRK-211ENST00000429595 KIAA1211LQ6NV74 962 aa8.01□□□□□ -1.13
PTPRK-211ENST00000429595 FAM26EQ8N5C1 309 aa8.01□□□□□ -1.13
PTPRK-211ENST00000429595 FAM169BQ8N8A8 192 aa8.01□□□□□ -1.13
PTPRK-211ENST00000429595 RTF1Q92541 710 aaKnown RBP8.01□□□□□ -1.13
PTPRK-211ENST00000429595 SPATA32Q96LK8 384 aa8.01□□□□□ -1.13
PTPRK-211ENST00000429595 P2RX7Q99572 595 aaKnown RBP8.01□□□□□ -1.13
PTPRK-211ENST00000429595 GPR20Q99678 358 aa8.01□□□□□ -1.13
PTPRK-211ENST00000429595 LBHD1Q9BQE6 289 aaPredicted RBP8.01□□□□□ -1.13
PTPRK-211ENST00000429595 DEFB129Q9H1M3 183 aa8.01□□□□□ -1.13
PTPRK-211ENST00000429595 TRMT112Q9UI30 125 aaKnown RBP8.01□□□□□ -1.13
PTPRK-211ENST00000429595 AKT3Q9Y243 479 aa8.01□□□□□ -1.13
PTPRK-211ENST00000429595 EMC9Q9Y3B6 208 aa8.01□□□□□ -1.13
PTPRK-211ENST00000429595 ZNF646O15015 1829 aaPredicted RBP8.01□□□□□ -1.13
PTPRK-211ENST00000429595 SCAMP3O14828 347 aaKnown RBP8□□□□□ -1.13
PTPRK-211ENST00000429595 SGSM2O43147 1006 aa8□□□□□ -1.13
PTPRK-211ENST00000429595 KCNH1O95259 989 aa8□□□□□ -1.13
PTPRK-211ENST00000429595 THBS2P35442 1172 aa8□□□□□ -1.13
PTPRK-211ENST00000429595 CYP4F3Q08477 520 aa8□□□□□ -1.13
PTPRK-211ENST00000429595 SCRN1Q12765 414 aa8□□□□□ -1.13
PTPRK-211ENST00000429595 PPP2R5EQ16537 467 aa8□□□□□ -1.13
PTPRK-211ENST00000429595 GMLQ99445 158 aa8□□□□□ -1.13
PTPRK-211ENST00000429595 MMP19Q99542 508 aa8□□□□□ -1.13
PTPRK-211ENST00000429595 C11orf84Q9BUA3 381 aaPredicted RBP8□□□□□ -1.13
PTPRK-211ENST00000429595 SMPD4Q9NXE4 827 aa8□□□□□ -1.13
PTPRK-211ENST00000429595 MARCH2Q9P0N8 246 aa8□□□□□ -1.13
PTPRK-211ENST00000429595 PPP2R3BQ9Y5P8 575 aa8□□□□□ -1.13
PTPRK-211ENST00000429595 MYO3BQ8WXR4 1341 aa8□□□□□ -1.13
PTPRK-211ENST00000429595 ANKRD34BA5PLL1 514 aa7.99□□□□□ -1.13
PTPRK-211ENST00000429595 MYO1BO43795 1136 aa7.99□□□□□ -1.13
PTPRK-211ENST00000429595 DIAPH1O60610 1272 aaKnown RBP7.99□□□□□ -1.13
PTPRK-211ENST00000429595 TAF1P21675 1872 aa7.99□□□□□ -1.13
PTPRK-211ENST00000429595 NASPP49321 788 aaPredicted RBP7.99□□□□□ -1.13
PTPRK-211ENST00000429595 CASP7P55210 303 aa7.99□□□□□ -1.13
PTPRK-211ENST00000429595 INF2Q27J81 1249 aa7.99□□□□□ -1.13
PTPRK-211ENST00000429595 HSP90AB3PQ58FF7 597 aa7.99□□□□□ -1.13
PTPRK-211ENST00000429595 VHLLQ6RSH7 139 aa7.99□□□□□ -1.13
PTPRK-211ENST00000429595 MIB1Q86YT6 1006 aa7.99□□□□□ -1.13
PTPRK-211ENST00000429595 DCP2Q8IU60 420 aaKnown RBP7.99□□□□□ -1.13
PTPRK-211ENST00000429595 DDX60Q8IY21 1712 aaKnown RBP7.99□□□□□ -1.13
PTPRK-211ENST00000429595 FAM43AQ8N2R8 423 aa7.99□□□□□ -1.13
PTPRK-211ENST00000429595 BRI3BPQ8WY22 251 aa7.99□□□□□ -1.13
PTPRK-211ENST00000429595 CELF1Q92879 486 aaKnown RBP7.99□□□□□ -1.13
PTPRK-211ENST00000429595 UHRF1Q96T88 793 aaPredicted RBP7.99□□□□□ -1.13
PTPRK-211ENST00000429595 LGR4Q9BXB1 951 aa7.99□□□□□ -1.13
PTPRK-211ENST00000429595 SH3TC1Q8TE82 1336 aa7.99□□□□□ -1.13
PTPRK-211ENST00000429595 U2SURPO15042 1029 aaKnown RBP7.98□□□□□ -1.13
PTPRK-211ENST00000429595 SMARCA5O60264 1052 aaPredicted RBP7.98□□□□□ -1.13
PTPRK-211ENST00000429595 ADCY3O60266 1144 aa7.98□□□□□ -1.13
PTPRK-211ENST00000429595 THBDP07204 575 aa7.98□□□□□ -1.13
PTPRK-211ENST00000429595 CETPP11597 493 aa7.98□□□□□ -1.13
PTPRK-211ENST00000429595 TNFRSF1AP19438 455 aa7.98□□□□□ -1.13
PTPRK-211ENST00000429595 RPL13P26373 211 aaKnown RBP7.98□□□□□ -1.13
PTPRK-211ENST00000429595 RPS8P62241 208 aaKnown RBP7.98□□□□□ -1.13
PTPRK-211ENST00000429595 DLGAP5Q15398 846 aa7.98□□□□□ -1.13
PTPRK-211ENST00000429595 ETV3LQ6ZN32 361 aa7.98□□□□□ -1.13
PTPRK-211ENST00000429595 STK32CQ86UX6 486 aa7.98□□□□□ -1.13
PTPRK-211ENST00000429595 TEX2Q8IWB9 1127 aa7.98□□□□□ -1.13
PTPRK-211ENST00000429595 ATXN2LQ8WWM7 1075 aaKnown RBP7.98□□□□□ -1.13
PTPRK-211ENST00000429595 CPA4Q9UI42 421 aa7.98□□□□□ -1.13
PTPRK-211ENST00000429595 PALD1Q9ULE6 856 aa7.98□□□□□ -1.13
PTPRK-211ENST00000429595 DUOX1Q9NRD9 1551 aa7.97□□□□□ -1.13
PTPRK-211ENST00000429595 NUP98P52948 1817 aa7.97□□□□□ -1.13
PTPRK-211ENST00000429595 VAMP1P23763 118 aa7.97□□□□□ -1.13
PTPRK-211ENST00000429595 TMCO4Q5TGY1 634 aa7.97□□□□□ -1.13
PTPRK-211ENST00000429595 C11orf49Q9H6J7 331 aa7.97□□□□□ -1.13
PTPRK-211ENST00000429595 ZCCHC17Q9NP64 241 aaKnown RBP7.97□□□□□ -1.13
PTPRK-211ENST00000429595 COL1A1P02452 1464 aaPredicted RBP7.97□□□□□ -1.13
PTPRK-211ENST00000429595 PLATP00750 562 aa7.96□□□□□ -1.14
PTPRK-211ENST00000429595 ITGA1P56199 1179 aa7.96□□□□□ -1.14
PTPRK-211ENST00000429595 PRKCZQ05513 592 aa7.96□□□□□ -1.14
PTPRK-211ENST00000429595 PRR31Q5SQ13 230 aa7.96□□□□□ -1.14
PTPRK-211ENST00000429595 KYQ8NBH2 561 aa7.96□□□□□ -1.14
PTPRK-211ENST00000429595 BVESQ8NE79 360 aa7.96□□□□□ -1.14
PTPRK-211ENST00000429595 NPLOC4Q8TAT6 608 aa7.96□□□□□ -1.14
PTPRK-211ENST00000429595 DIS3LQ8TF46 1054 aaKnown RBP7.96□□□□□ -1.14
PTPRK-211ENST00000429595 FRS2Q8WU20 508 aa7.96□□□□□ -1.14
PTPRK-211ENST00000429595 PPM1EQ8WY54 764 aa7.96□□□□□ -1.14
PTPRK-211ENST00000429595 ASB2Q96Q27 587 aa7.96□□□□□ -1.14
PTPRK-211ENST00000429595 SSBP3Q9BWW4 388 aaPredicted RBP7.96□□□□□ -1.14
PTPRK-211ENST00000429595 VEZTQ9HBM0 779 aa7.96□□□□□ -1.14
PTPRK-211ENST00000429595 PODXL2Q9NZ53 605 aa7.96□□□□□ -1.14
PTPRK-211ENST00000429595 RANBP2P49792 3224 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms