RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 GALTP07902 379 aa18.58■□□□□ 0.56
VARS-216ENST00000428445 PSMA5P28066 241 aa18.58■□□□□ 0.56
VARS-216ENST00000428445 DNM2P50570 870 aa18.58■□□□□ 0.56
VARS-216ENST00000428445 TPRNQ4KMQ1 711 aa18.58■□□□□ 0.56
VARS-216ENST00000428445 CES5AQ6NT32 575 aa18.58■□□□□ 0.56
VARS-216ENST00000428445 CATSPER4Q7RTX7 472 aa18.58■□□□□ 0.56
VARS-216ENST00000428445 ZNF710Q8N1W2 664 aa18.58■□□□□ 0.56
VARS-216ENST00000428445 IGSF21Q96ID5 467 aa18.58■□□□□ 0.56
VARS-216ENST00000428445 CHST12Q9NRB3 414 aa18.58■□□□□ 0.56
VARS-216ENST00000428445 GJB4Q9NTQ9 266 aa18.58■□□□□ 0.56
VARS-216ENST00000428445 FAM105AQ9NUU6 356 aa18.58■□□□□ 0.56
VARS-216ENST00000428445 WRAP73Q9P2S5 460 aaPredicted RBP18.58■□□□□ 0.56
VARS-216ENST00000428445 LIMD1Q9UGP4 676 aa18.58■□□□□ 0.56
VARS-216ENST00000428445 H0Y858 1186 aa18.57■□□□□ 0.56
VARS-216ENST00000428445 DDHD2O94830 711 aa18.57■□□□□ 0.56
VARS-216ENST00000428445 SSBP05455 408 aaKnown RBP eCLIP18.57■□□□□ 0.56
VARS-216ENST00000428445 SLC11A1P49279 550 aa18.57■□□□□ 0.56
VARS-216ENST00000428445 NOMO2Q5JPE7 1267 aa18.57■□□□□ 0.56
VARS-216ENST00000428445 TRIM22Q8IYM9 498 aa18.57■□□□□ 0.56
VARS-216ENST00000428445 RDM1Q8NG50 284 aa18.57■□□□□ 0.56
VARS-216ENST00000428445 SLC22A17Q8WUG5 538 aa18.57■□□□□ 0.56
VARS-216ENST00000428445 TMEM143Q96AN5 459 aa18.57■□□□□ 0.56
VARS-216ENST00000428445 MBOAT7Q96N66 472 aa18.57■□□□□ 0.56
VARS-216ENST00000428445 MRPL9Q9BYD2 267 aaKnown RBP18.57■□□□□ 0.56
VARS-216ENST00000428445 MINDY3Q9H8M7 445 aa18.57■□□□□ 0.56
VARS-216ENST00000428445 IFT122Q9HBG6 1241 aa18.57■□□□□ 0.56
VARS-216ENST00000428445 ZSWIM6Q9HCJ5 1215 aa18.57■□□□□ 0.56
VARS-216ENST00000428445 DDX25Q9UHL0 483 aaKnown RBP18.57■□□□□ 0.56
VARS-216ENST00000428445 NR2E1Q9Y466 385 aa18.57■□□□□ 0.56
VARS-216ENST00000428445 SRGAP2CP0DJJ0 459 aa18.56■□□□□ 0.56
VARS-216ENST00000428445 CTSAP10619 480 aa18.56■□□□□ 0.56
VARS-216ENST00000428445 SFPQP23246 707 aaKnown RBP eCLIP18.56■□□□□ 0.56
VARS-216ENST00000428445 RNASELQ05823 741 aaKnown RBP18.56■□□□□ 0.56
VARS-216ENST00000428445 ITIH3Q06033 890 aa18.56■□□□□ 0.56
VARS-216ENST00000428445 LETM2Q2VYF4 491 aa18.56■□□□□ 0.56
VARS-216ENST00000428445 TMC5Q6UXY8 1006 aa18.56■□□□□ 0.56
VARS-216ENST00000428445 AGMOQ6ZNB7 445 aa18.56■□□□□ 0.56
VARS-216ENST00000428445 DDX53Q86TM3 631 aaKnown RBP18.56■□□□□ 0.56
VARS-216ENST00000428445 TMEM87AQ8NBN3 555 aa18.56■□□□□ 0.56
VARS-216ENST00000428445 SLKQ9H2G2 1235 aaPredicted RBP18.56■□□□□ 0.56
VARS-216ENST00000428445 MYO15AQ9UKN7 3530 aa18.55■□□□□ 0.56
VARS-216ENST00000428445 CPLX1O14810 134 aa18.55■□□□□ 0.56
VARS-216ENST00000428445 ZBTB39O15060 712 aa18.55■□□□□ 0.56
VARS-216ENST00000428445 EPB41L2O43491 1005 aaKnown RBP18.55■□□□□ 0.56
VARS-216ENST00000428445 DEXIO95424 95 aa18.55■□□□□ 0.56
VARS-216ENST00000428445 MYBP10242 640 aa18.55■□□□□ 0.56
VARS-216ENST00000428445 PSMC5P62195 406 aa18.55■□□□□ 0.56
VARS-216ENST00000428445 NONOQ15233 471 aaKnown RBP eCLIP18.55■□□□□ 0.56
VARS-216ENST00000428445 GLB1LQ6UWU2 654 aa18.55■□□□□ 0.56
VARS-216ENST00000428445 ZNF410Q86VK4 478 aa18.55■□□□□ 0.56
VARS-216ENST00000428445 ATOH1Q92858 354 aaPredicted RBP18.55■□□□□ 0.56
VARS-216ENST00000428445 TRAIPQ9BWF2 469 aa18.55■□□□□ 0.56
VARS-216ENST00000428445 CYP26B1Q9NR63 512 aa18.55■□□□□ 0.56
VARS-216ENST00000428445 DBR1Q9UK59 544 aaKnown RBP18.55■□□□□ 0.56
VARS-216ENST00000428445 VAV3Q9UKW4 847 aa18.55■□□□□ 0.56
VARS-216ENST00000428445 SORCS3Q9UPU3 1222 aa18.55■□□□□ 0.56
VARS-216ENST00000428445 PCDHB2Q9Y5E7 798 aa18.55■□□□□ 0.56
VARS-216ENST00000428445 POMCP01189 267 aa18.54■□□□□ 0.56
VARS-216ENST00000428445 MTHFRP42898 656 aa18.54■□□□□ 0.56
VARS-216ENST00000428445 CDC42EP1Q00587 391 aa18.54■□□□□ 0.56
VARS-216ENST00000428445 TMEM105Q8N8V8 129 aa18.54■□□□□ 0.56
VARS-216ENST00000428445 DAGLBQ8NCG7 672 aa18.54■□□□□ 0.56
VARS-216ENST00000428445 OXER1Q8TDS5 423 aa18.54■□□□□ 0.56
VARS-216ENST00000428445 PRPF31Q8WWY3 499 aaKnown RBP18.54■□□□□ 0.56
VARS-216ENST00000428445 CEP170P1Q96L14 293 aa18.54■□□□□ 0.56
VARS-216ENST00000428445 NECTIN4Q96NY8 510 aa18.54■□□□□ 0.56
VARS-216ENST00000428445 C22orf23Q9BZE7 217 aa18.54■□□□□ 0.56
VARS-216ENST00000428445 INO80BQ9C086 356 aaPredicted RBP18.54■□□□□ 0.56
VARS-216ENST00000428445 RGL1Q9NZL6 768 aa18.54■□□□□ 0.56
VARS-216ENST00000428445 COL4A3BPQ9Y5P4 624 aa18.54■□□□□ 0.56
VARS-216ENST00000428445 CYP46A1Q9Y6A2 500 aa18.54■□□□□ 0.56
VARS-216ENST00000428445 ZNF623O75123 536 aa18.53■□□□□ 0.56
VARS-216ENST00000428445 REC8O95072 547 aa18.53■□□□□ 0.56
VARS-216ENST00000428445 QARSP47897 775 aaKnown RBP18.53■□□□□ 0.56
VARS-216ENST00000428445 MTMR3Q13615 1198 aa18.53■□□□□ 0.56
VARS-216ENST00000428445 BMS1Q14692 1282 aaKnown RBP18.53■□□□□ 0.56
VARS-216ENST00000428445 PTPN14Q15678 1187 aa18.53■□□□□ 0.56
VARS-216ENST00000428445 EARS2Q5JPH6 523 aaKnown RBP18.53■□□□□ 0.56
VARS-216ENST00000428445 ATAT1Q5SQI0 421 aa18.53■□□□□ 0.56
VARS-216ENST00000428445 UBXN11Q5T124 520 aa18.53■□□□□ 0.56
VARS-216ENST00000428445 TAS1R1Q7RTX1 841 aa18.53■□□□□ 0.56
VARS-216ENST00000428445 ZNF274Q96GC6 653 aaPredicted RBP18.53■□□□□ 0.56
VARS-216ENST00000428445 KLHL5Q96PQ7 755 aa18.53■□□□□ 0.56
VARS-216ENST00000428445 PRRX2Q99811 253 aa18.53■□□□□ 0.56
VARS-216ENST00000428445 AGPAT5Q9NUQ2 364 aa18.53■□□□□ 0.56
VARS-216ENST00000428445 C2orf16Q68DN1 1984 aa18.53■□□□□ 0.56
VARS-216ENST00000428445 CFAP54Q96N23 3096 aa18.52■□□□□ 0.56
VARS-216ENST00000428445 FAM205CA6NFA0 338 aa18.52■□□□□ 0.56
VARS-216ENST00000428445 C2CD2LO14523 706 aa18.52■□□□□ 0.56
VARS-216ENST00000428445 SKIP12755 728 aa18.52■□□□□ 0.56
VARS-216ENST00000428445 HOXA11P31270 313 aaPredicted RBP18.52■□□□□ 0.56
VARS-216ENST00000428445 POLGP54098 1239 aaPredicted RBP18.52■□□□□ 0.56
VARS-216ENST00000428445 CTTNQ14247 550 aaKnown RBP18.52■□□□□ 0.56
VARS-216ENST00000428445 KIAA1841Q6NSI8 718 aa18.52■□□□□ 0.56
VARS-216ENST00000428445 MOXD1Q6UVY6 613 aa18.52■□□□□ 0.56
VARS-216ENST00000428445 CABP7Q86V35 215 aa18.52■□□□□ 0.56
VARS-216ENST00000428445 TDRD5Q8NAT2 981 aaKnown RBP18.52■□□□□ 0.56
VARS-216ENST00000428445 HAS1Q92839 578 aa18.52■□□□□ 0.56
VARS-216ENST00000428445 PHF20Q9BVI0 1012 aa18.52■□□□□ 0.56
VARS-216ENST00000428445 KCNMB3Q9NPA1 279 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms