RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 RNF149Q8NC42 400 aa16.89■□□□□ 0.29
PHF1-204ENST00000427826 HELQQ8TDG4 1101 aa16.89■□□□□ 0.29
PHF1-204ENST00000427826 PGBD4Q96DM1 585 aa16.89■□□□□ 0.29
PHF1-204ENST00000427826 IGFLR1Q9H665 355 aa16.89■□□□□ 0.29
PHF1-204ENST00000427826 TUFT1Q9NNX1 390 aa16.89■□□□□ 0.29
PHF1-204ENST00000427826 TLR9Q9NR96 1032 aa16.89■□□□□ 0.29
PHF1-204ENST00000427826 BMP2KQ9NSY1 1161 aaPredicted RBP16.89■□□□□ 0.29
PHF1-204ENST00000427826 AGPAT5Q9NUQ2 364 aa16.89■□□□□ 0.29
PHF1-204ENST00000427826 FAM105AQ9NUU6 356 aa16.89■□□□□ 0.29
PHF1-204ENST00000427826 POTEMA6NI47 508 aa16.88■□□□□ 0.29
PHF1-204ENST00000427826 CSPG5O95196 566 aa16.88■□□□□ 0.29
PHF1-204ENST00000427826 OR52Z1P0C646 297 aa16.88■□□□□ 0.29
PHF1-204ENST00000427826 ATF7P17544 494 aaPredicted RBP16.88■□□□□ 0.29
PHF1-204ENST00000427826 TECP42680 631 aa16.88■□□□□ 0.29
PHF1-204ENST00000427826 RARRES1P49788 294 aa16.88■□□□□ 0.29
PHF1-204ENST00000427826 ADAM15Q13444 863 aa16.88■□□□□ 0.29
PHF1-204ENST00000427826 GLB1LQ6UWU2 654 aa16.88■□□□□ 0.29
PHF1-204ENST00000427826 MRPS27Q92552 414 aaKnown RBP16.88■□□□□ 0.29
PHF1-204ENST00000427826 NACC1Q96RE7 527 aa16.88■□□□□ 0.29
PHF1-204ENST00000427826 POLR3CQ9BUI4 534 aaPredicted RBP16.88■□□□□ 0.29
PHF1-204ENST00000427826 SPG21Q9NZD8 308 aa16.88■□□□□ 0.29
PHF1-204ENST00000427826 BRWD1Q9NSI6 2320 aa16.88■□□□□ 0.29
PHF1-204ENST00000427826 BDP1A6H8Y1 2624 aa16.87■□□□□ 0.29
PHF1-204ENST00000427826 ERLIN2O94905 339 aa16.87■□□□□ 0.29
PHF1-204ENST00000427826 SPATA31C1P0DKV0 1188 aa16.87■□□□□ 0.29
PHF1-204ENST00000427826 U2AF2P26368 475 aaKnown RBP eCLIP16.87■□□□□ 0.29
PHF1-204ENST00000427826 AXLP30530 894 aa16.87■□□□□ 0.29
PHF1-204ENST00000427826 IRS1P35568 1242 aa16.87■□□□□ 0.29
PHF1-204ENST00000427826 LTBRP36941 435 aa16.87■□□□□ 0.29
PHF1-204ENST00000427826 ALDH7A1P49419 539 aaKnown RBP16.87■□□□□ 0.29
PHF1-204ENST00000427826 MCM2P49736 904 aa16.87■□□□□ 0.29
PHF1-204ENST00000427826 EFHBQ8N7U6 833 aa16.87■□□□□ 0.29
PHF1-204ENST00000427826 PIGOQ8TEQ8 1089 aa16.87■□□□□ 0.29
PHF1-204ENST00000427826 CDCA3Q99618 268 aaPredicted RBP16.87■□□□□ 0.29
PHF1-204ENST00000427826 TLE6Q9H808 572 aa16.87■□□□□ 0.29
PHF1-204ENST00000427826 MINDY3Q9H8M7 445 aa16.87■□□□□ 0.29
PHF1-204ENST00000427826 NGRNQ9NPE2 291 aaKnown RBP16.87■□□□□ 0.29
PHF1-204ENST00000427826 XPNPEP1Q9NQW7 623 aa16.87■□□□□ 0.29
PHF1-204ENST00000427826 HCSTQ9UBK5 93 aa16.87■□□□□ 0.29
PHF1-204ENST00000427826 DBR1Q9UK59 544 aaKnown RBP16.87■□□□□ 0.29
PHF1-204ENST00000427826 PCDHB2Q9Y5E7 798 aa16.87■□□□□ 0.29
PHF1-204ENST00000427826 STK24Q9Y6E0 443 aa16.87■□□□□ 0.29
PHF1-204ENST00000427826 FNDC1Q4ZHG4 1894 aaPredicted RBP16.86■□□□□ 0.29
PHF1-204ENST00000427826 TCF20Q9UGU0 1960 aaKnown RBP16.86■□□□□ 0.29
PHF1-204ENST00000427826 MUTP22033 750 aa16.86■□□□□ 0.29
PHF1-204ENST00000427826 RPA1P27694 616 aa16.86■□□□□ 0.29
PHF1-204ENST00000427826 ARL2P36404 184 aa16.86■□□□□ 0.29
PHF1-204ENST00000427826 NRIP1P48552 1158 aa16.86■□□□□ 0.29
PHF1-204ENST00000427826 NDUFV1P49821 464 aa16.86■□□□□ 0.29
PHF1-204ENST00000427826 PTENP60484 403 aa16.86■□□□□ 0.29
PHF1-204ENST00000427826 BMS1Q14692 1282 aaKnown RBP16.86■□□□□ 0.29
PHF1-204ENST00000427826 HAUS3Q68CZ6 603 aa16.86■□□□□ 0.29
PHF1-204ENST00000427826 CATSPER3Q86XQ3 398 aa16.86■□□□□ 0.29
PHF1-204ENST00000427826 IFNLR1Q8IU57 520 aaPredicted RBP16.86■□□□□ 0.29
PHF1-204ENST00000427826 FAM178BQ8IXR5 827 aa16.86■□□□□ 0.29
PHF1-204ENST00000427826 CNNM3Q8NE01 707 aa16.86■□□□□ 0.29
PHF1-204ENST00000427826 MCPH1Q8NEM0 835 aa16.86■□□□□ 0.29
PHF1-204ENST00000427826 CCDC51Q96ER9 411 aa16.86■□□□□ 0.29
PHF1-204ENST00000427826 NFKBIZQ9BYH8 718 aa16.86■□□□□ 0.29
PHF1-204ENST00000427826 RAB34Q9BZG1 259 aa16.86■□□□□ 0.29
PHF1-204ENST00000427826 UBN1Q9NPG3 1134 aa16.86■□□□□ 0.29
PHF1-204ENST00000427826 PRKAG3Q9UGI9 489 aa16.86■□□□□ 0.29
PHF1-204ENST00000427826 MYO7AQ13402 2215 aa16.85■□□□□ 0.29
PHF1-204ENST00000427826 IL9P15248 144 aa16.85■□□□□ 0.29
PHF1-204ENST00000427826 HOXA11P31270 313 aaPredicted RBP16.85■□□□□ 0.29
PHF1-204ENST00000427826 GTF2F1P35269 517 aaKnown RBP eCLIP16.85■□□□□ 0.29
PHF1-204ENST00000427826 FXR2P51116 673 aaKnown RBP eCLIP16.85■□□□□ 0.29
PHF1-204ENST00000427826 ERVFC1P60507 584 aa16.85■□□□□ 0.29
PHF1-204ENST00000427826 PDIA5Q14554 519 aa16.85■□□□□ 0.29
PHF1-204ENST00000427826 NOMO2Q5JPE7 1267 aa16.85■□□□□ 0.29
PHF1-204ENST00000427826 MRPL10Q7Z7H8 261 aaKnown RBP16.85■□□□□ 0.29
PHF1-204ENST00000427826 RBM23Q86U06 439 aaKnown RBP16.85■□□□□ 0.29
PHF1-204ENST00000427826 URGCPQ8TCY9 931 aa16.85■□□□□ 0.29
PHF1-204ENST00000427826 ENTPD7Q9NQZ7 604 aa16.85■□□□□ 0.29
PHF1-204ENST00000427826 CD207Q9UJ71 328 aa16.85■□□□□ 0.29
PHF1-204ENST00000427826 CNTNAP2Q9UHC6 1331 aa16.85■□□□□ 0.29
PHF1-204ENST00000427826 INO80B-WBP1J3KQ70 363 aa16.84■□□□□ 0.29
PHF1-204ENST00000427826 LAD1O00515 517 aa16.84■□□□□ 0.29
PHF1-204ENST00000427826 FSCN2O14926 492 aa16.84■□□□□ 0.29
PHF1-204ENST00000427826 MED24O75448 989 aa16.84■□□□□ 0.29
PHF1-204ENST00000427826 OFD1O75665 1012 aa16.84■□□□□ 0.29
PHF1-204ENST00000427826 SRGAP2BP0DMP2 458 aa16.84■□□□□ 0.29
PHF1-204ENST00000427826 BCAR1P56945 870 aa16.84■□□□□ 0.29
PHF1-204ENST00000427826 RNASELQ05823 741 aaKnown RBP16.84■□□□□ 0.29
PHF1-204ENST00000427826 NOTUMQ6P988 496 aa16.84■□□□□ 0.29
PHF1-204ENST00000427826 ADGRD2Q7Z7M1 963 aa16.84■□□□□ 0.29
PHF1-204ENST00000427826 GJD3Q8N144 294 aa16.84■□□□□ 0.29
PHF1-204ENST00000427826 SLC39A11Q8N1S5 342 aa16.84■□□□□ 0.29
PHF1-204ENST00000427826 LPPQ93052 612 aa16.84■□□□□ 0.29
PHF1-204ENST00000427826 TMX3Q96JJ7 454 aa16.84■□□□□ 0.29
PHF1-204ENST00000427826 TCF25Q9BQ70 676 aa16.84■□□□□ 0.29
PHF1-204ENST00000427826 C1QTNF1Q9BXJ1 281 aa16.84■□□□□ 0.29
PHF1-204ENST00000427826 KANSL3Q9P2N6 904 aa16.84■□□□□ 0.29
PHF1-204ENST00000427826 LRWD1Q9UFC0 647 aa16.84■□□□□ 0.29
PHF1-204ENST00000427826 LINC01565O15544 149 aa16.83■□□□□ 0.28
PHF1-204ENST00000427826 USO1O60763 962 aaKnown RBP16.83■□□□□ 0.28
PHF1-204ENST00000427826 TBX10O75333 385 aa16.83■□□□□ 0.28
PHF1-204ENST00000427826 NCLP19338 710 aaKnown RBP16.83■□□□□ 0.28
PHF1-204ENST00000427826 DLX2Q07687 328 aaPredicted RBP16.83■□□□□ 0.28
PHF1-204ENST00000427826 SMAD4Q13485 552 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms