RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 TEX35Q5T0J7 233 aa23.71■■□□□ 1.39
CNEP1R1-202ENST00000427478 SRGAP1Q7Z6B7 1085 aa23.71■■□□□ 1.39
CNEP1R1-202ENST00000427478 CAPN6Q9Y6Q1 641 aa23.71■■□□□ 1.39
CNEP1R1-202ENST00000427478 PJA2O43164 708 aa23.7■■□□□ 1.38
CNEP1R1-202ENST00000427478 RRP9O43818 475 aaKnown RBP23.7■■□□□ 1.38
CNEP1R1-202ENST00000427478 MOCS3O95396 460 aa23.7■■□□□ 1.38
CNEP1R1-202ENST00000427478 PNMA6AP0CW24 399 aaPredicted RBP23.7■■□□□ 1.38
CNEP1R1-202ENST00000427478 PTK2Q05397 1052 aa23.7■■□□□ 1.38
CNEP1R1-202ENST00000427478 NEDD9Q14511 834 aa23.7■■□□□ 1.38
CNEP1R1-202ENST00000427478 LY6KQ17RY6 165 aa23.7■■□□□ 1.38
CNEP1R1-202ENST00000427478 MAP1SQ66K74 1059 aaPredicted RBP23.7■■□□□ 1.38
CNEP1R1-202ENST00000427478 ANKRD13CQ8N6S4 541 aa23.7■■□□□ 1.38
CNEP1R1-202ENST00000427478 CEP112Q8N8E3 955 aa23.7■■□□□ 1.38
CNEP1R1-202ENST00000427478 ADAMTS1Q9UHI8 967 aa23.7■■□□□ 1.38
CNEP1R1-202ENST00000427478 IGKV6D-21A0A0A0MT36 114 aa23.69■■□□□ 1.38
CNEP1R1-202ENST00000427478 GGPS1O95749 300 aa23.69■■□□□ 1.38
CNEP1R1-202ENST00000427478 ADSSP30520 456 aa23.69■■□□□ 1.38
CNEP1R1-202ENST00000427478 RTP1P59025 263 aa23.69■■□□□ 1.38
CNEP1R1-202ENST00000427478 FBXO38Q6PIJ6 1188 aa23.69■■□□□ 1.38
CNEP1R1-202ENST00000427478 IFT74Q96LB3 600 aa23.69■■□□□ 1.38
CNEP1R1-202ENST00000427478 MPHOSPH6Q99547 160 aaKnown RBP23.69■■□□□ 1.38
CNEP1R1-202ENST00000427478 ADRB2P07550 413 aa23.69■■□□□ 1.38
CNEP1R1-202ENST00000427478 CYP2C8P10632 490 aa23.69■■□□□ 1.38
CNEP1R1-202ENST00000427478 CNGA1P29973 690 aa23.69■■□□□ 1.38
CNEP1R1-202ENST00000427478 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.69■■□□□ 1.38
CNEP1R1-202ENST00000427478 RSRC2Q7L4I2 434 aaKnown RBP23.69■■□□□ 1.38
CNEP1R1-202ENST00000427478 TRAPPC11Q7Z392 1133 aa23.69■■□□□ 1.38
CNEP1R1-202ENST00000427478 ZNF571Q7Z3V5 609 aaPredicted RBP23.69■■□□□ 1.38
CNEP1R1-202ENST00000427478 TXLNBQ8N3L3 684 aa23.69■■□□□ 1.38
CNEP1R1-202ENST00000427478 PLEKHO2Q8TD55 490 aa23.69■■□□□ 1.38
CNEP1R1-202ENST00000427478 GOLGA1Q92805 767 aa23.69■■□□□ 1.38
CNEP1R1-202ENST00000427478 SAAL1Q96ER3 474 aa23.69■■□□□ 1.38
CNEP1R1-202ENST00000427478 PCYT2Q99447 389 aa23.69■■□□□ 1.38
CNEP1R1-202ENST00000427478 MYH10P35580 1976 aa23.69■■□□□ 1.38
CNEP1R1-202ENST00000427478 SOCS7O14512 581 aa23.68■■□□□ 1.38
CNEP1R1-202ENST00000427478 ARIH2O95376 493 aa23.68■■□□□ 1.38
CNEP1R1-202ENST00000427478 CHMP4BP1P59074 171 aa23.68■■□□□ 1.38
CNEP1R1-202ENST00000427478 ERVK-9P63128 1117 aa23.68■■□□□ 1.38
CNEP1R1-202ENST00000427478 PPP3CAQ08209 521 aa23.68■■□□□ 1.38
CNEP1R1-202ENST00000427478 WHAMMP3Q1A5X7 153 aa23.68■■□□□ 1.38
CNEP1R1-202ENST00000427478 PDCL3Q9H2J4 239 aa23.68■■□□□ 1.38
CNEP1R1-202ENST00000427478 LUC7LQ9NQ29 371 aaKnown RBP23.68■■□□□ 1.38
CNEP1R1-202ENST00000427478 SALL4Q9UJQ4 1053 aa23.68■■□□□ 1.38
CNEP1R1-202ENST00000427478 DNAJC12Q9UKB3 198 aa23.68■■□□□ 1.38
CNEP1R1-202ENST00000427478 BZW2Q9Y6E2 419 aaKnown RBP23.68■■□□□ 1.38
CNEP1R1-202ENST00000427478 DNAJC25-GNG10A0A024R161 153 aa23.68■■□□□ 1.38
CNEP1R1-202ENST00000427478 MAPK13O15264 365 aa23.68■■□□□ 1.38
CNEP1R1-202ENST00000427478 TACC1O75410 805 aa23.68■■□□□ 1.38
CNEP1R1-202ENST00000427478 TGFB3P10600 412 aa23.68■■□□□ 1.38
CNEP1R1-202ENST00000427478 SLC39A4Q6P5W5 647 aa23.68■■□□□ 1.38
CNEP1R1-202ENST00000427478 CBWD2Q8IUF1 395 aa23.68■■□□□ 1.38
CNEP1R1-202ENST00000427478 TRIM58Q8NG06 486 aa23.68■■□□□ 1.38
CNEP1R1-202ENST00000427478 TMEM143Q96AN5 459 aa23.68■■□□□ 1.38
CNEP1R1-202ENST00000427478 ARID3AQ99856 593 aa23.68■■□□□ 1.38
CNEP1R1-202ENST00000427478 EPC1Q9H2F5 836 aa23.68■■□□□ 1.38
CNEP1R1-202ENST00000427478 APEX2Q9UBZ4 518 aa23.68■■□□□ 1.38
CNEP1R1-202ENST00000427478 TULP1O00294 542 aaPredicted RBP23.67■■□□□ 1.38
CNEP1R1-202ENST00000427478 GFPT2O94808 682 aa23.67■■□□□ 1.38
CNEP1R1-202ENST00000427478 TCF7P36402 384 aaPredicted RBP23.67■■□□□ 1.38
CNEP1R1-202ENST00000427478 PRKCIP41743 596 aa23.67■■□□□ 1.38
CNEP1R1-202ENST00000427478 GCLMP48507 274 aa23.67■■□□□ 1.38
CNEP1R1-202ENST00000427478 SNRNP35Q16560 246 aaKnown RBP23.67■■□□□ 1.38
CNEP1R1-202ENST00000427478 C1orf220Q5T0J3 134 aa23.67■■□□□ 1.38
CNEP1R1-202ENST00000427478 METTL7BQ6UX53 244 aa23.67■■□□□ 1.38
CNEP1R1-202ENST00000427478 MROH8Q9H579 483 aa23.67■■□□□ 1.38
CNEP1R1-202ENST00000427478 F8VZ95 297 aa23.66■■□□□ 1.38
CNEP1R1-202ENST00000427478 STAT1P42224 750 aa23.66■■□□□ 1.38
CNEP1R1-202ENST00000427478 PAPD7Q5XG87 772 aaKnown RBP23.66■■□□□ 1.38
CNEP1R1-202ENST00000427478 DHX33Q9H6R0 707 aaKnown RBP23.66■■□□□ 1.38
CNEP1R1-202ENST00000427478 SAR1BQ9Y6B6 198 aa23.66■■□□□ 1.38
CNEP1R1-202ENST00000427478 SIP14410 1827 aa23.66■■□□□ 1.38
CNEP1R1-202ENST00000427478 ANO9A1A5B4 782 aa23.66■■□□□ 1.38
CNEP1R1-202ENST00000427478 HNRNPDLO14979 420 aaKnown RBP23.66■■□□□ 1.38
CNEP1R1-202ENST00000427478 N4BP1O75113 896 aaKnown RBP23.66■■□□□ 1.38
CNEP1R1-202ENST00000427478 STAT5BP51692 787 aa23.66■■□□□ 1.38
CNEP1R1-202ENST00000427478 MKRN3Q13064 507 aaKnown RBP23.66■■□□□ 1.38
CNEP1R1-202ENST00000427478 DRAP1Q14919 205 aaPredicted RBP23.66■■□□□ 1.38
CNEP1R1-202ENST00000427478 FAM160B1Q5W0V3 765 aa23.66■■□□□ 1.38
CNEP1R1-202ENST00000427478 TAS1R3Q7RTX0 852 aa23.66■■□□□ 1.38
CNEP1R1-202ENST00000427478 FBXO16Q8IX29 292 aaPredicted RBP23.66■■□□□ 1.38
CNEP1R1-202ENST00000427478 LMO3Q8TAP4 145 aa23.66■■□□□ 1.38
CNEP1R1-202ENST00000427478 POMGNT1Q8WZA1 660 aa23.66■■□□□ 1.38
CNEP1R1-202ENST00000427478 BICD1Q96G01 975 aa23.66■■□□□ 1.38
CNEP1R1-202ENST00000427478 NIFKQ9BYG3 293 aaKnown RBP23.66■■□□□ 1.38
CNEP1R1-202ENST00000427478 STK33Q9BYT3 514 aa23.66■■□□□ 1.38
CNEP1R1-202ENST00000427478 PORCNQ9H237 461 aa23.66■■□□□ 1.38
CNEP1R1-202ENST00000427478 ARHGAP28Q9P2N2 729 aa23.66■■□□□ 1.38
CNEP1R1-202ENST00000427478 DDX41Q9UJV9 622 aaKnown RBP23.66■■□□□ 1.38
CNEP1R1-202ENST00000427478 PNMA3Q9UL41 463 aa23.66■■□□□ 1.38
CNEP1R1-202ENST00000427478 BUB1O43683 1085 aa23.65■■□□□ 1.38
CNEP1R1-202ENST00000427478 SRGAP2O75044 1071 aa23.65■■□□□ 1.38
CNEP1R1-202ENST00000427478 FERP16591 822 aa23.65■■□□□ 1.38
CNEP1R1-202ENST00000427478 SLC7A3Q8WY07 619 aa23.65■■□□□ 1.38
CNEP1R1-202ENST00000427478 SEPT1Q8WYJ6 367 aa23.65■■□□□ 1.38
CNEP1R1-202ENST00000427478 ALS2CR12Q96Q35 445 aa23.65■■□□□ 1.38
CNEP1R1-202ENST00000427478 PACSIN1Q9BY11 444 aa23.65■■□□□ 1.38
CNEP1R1-202ENST00000427478 EFCC1Q9HA90 598 aa23.65■■□□□ 1.38
CNEP1R1-202ENST00000427478 PLXNB2O15031 1838 aa23.65■■□□□ 1.38
CNEP1R1-202ENST00000427478 SOX5P35711 763 aa23.65■■□□□ 1.38
CNEP1R1-202ENST00000427478 CETN1Q12798 172 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms