RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 ATF7P17544 494 aaPredicted RBP11.97□□□□□ -0.49
LINC01238-202ENST00000426962 KCNA5P22460 613 aa11.97□□□□□ -0.49
LINC01238-202ENST00000426962 HOXA11P31270 313 aaPredicted RBP11.97□□□□□ -0.49
LINC01238-202ENST00000426962 RAB27AP51159 221 aa11.97□□□□□ -0.49
LINC01238-202ENST00000426962 PLCB3Q01970 1234 aa11.97□□□□□ -0.49
LINC01238-202ENST00000426962 NCBP1Q09161 790 aaKnown RBP11.97□□□□□ -0.49
LINC01238-202ENST00000426962 CLLU1OSQ5K130 101 aa11.97□□□□□ -0.49
LINC01238-202ENST00000426962 HAUS3Q68CZ6 603 aa11.97□□□□□ -0.49
LINC01238-202ENST00000426962 IFNLR1Q8IU57 520 aaPredicted RBP11.97□□□□□ -0.49
LINC01238-202ENST00000426962 THNSL1Q8IYQ7 743 aa11.97□□□□□ -0.49
LINC01238-202ENST00000426962 LRRC43Q8N309 656 aa11.97□□□□□ -0.49
LINC01238-202ENST00000426962 HELQQ8TDG4 1101 aa11.97□□□□□ -0.49
LINC01238-202ENST00000426962 MICAL1Q8TDZ2 1067 aa11.97□□□□□ -0.49
LINC01238-202ENST00000426962 PPP2R3CQ969Q6 453 aa11.97□□□□□ -0.49
LINC01238-202ENST00000426962 PGBD4Q96DM1 585 aa11.97□□□□□ -0.49
LINC01238-202ENST00000426962 MRPL9Q9BYD2 267 aaKnown RBP11.97□□□□□ -0.49
LINC01238-202ENST00000426962 RAB34Q9BZG1 259 aa11.97□□□□□ -0.49
LINC01238-202ENST00000426962 PUF60Q9UHX1 559 aaKnown RBP11.97□□□□□ -0.49
LINC01238-202ENST00000426962 SMC3Q9UQE7 1217 aa11.97□□□□□ -0.49
LINC01238-202ENST00000426962 NLRC5Q86WI3 1866 aa11.97□□□□□ -0.49
LINC01238-202ENST00000426962 USO1O60763 962 aaKnown RBP11.96□□□□□ -0.49
LINC01238-202ENST00000426962 ERLIN2O94905 339 aa11.96□□□□□ -0.49
LINC01238-202ENST00000426962 GLRA2P23416 452 aa11.96□□□□□ -0.49
LINC01238-202ENST00000426962 AXLP30530 894 aa11.96□□□□□ -0.49
LINC01238-202ENST00000426962 IRS1P35568 1242 aa11.96□□□□□ -0.49
LINC01238-202ENST00000426962 KRT17Q04695 432 aa11.96□□□□□ -0.49
LINC01238-202ENST00000426962 HYAL1Q12794 435 aa11.96□□□□□ -0.49
LINC01238-202ENST00000426962 CTC1Q2NKJ3 1217 aa11.96□□□□□ -0.49
LINC01238-202ENST00000426962 PUS10Q3MIT2 529 aaKnown RBP11.96□□□□□ -0.49
LINC01238-202ENST00000426962 RILPL1Q5EBL4 403 aa11.96□□□□□ -0.49
LINC01238-202ENST00000426962 LARP1BQ659C4 914 aaKnown RBP11.96□□□□□ -0.49
LINC01238-202ENST00000426962 PDE12Q6L8Q7 609 aaKnown RBP11.96□□□□□ -0.49
LINC01238-202ENST00000426962 KCNT2Q6UVM3 1135 aa11.96□□□□□ -0.49
LINC01238-202ENST00000426962 EP400NLQ6ZTU2 488 aa11.96□□□□□ -0.49
LINC01238-202ENST00000426962 MRPL10Q7Z7H8 261 aaKnown RBP11.96□□□□□ -0.49
LINC01238-202ENST00000426962 IGSF22Q8N9C0 903 aa11.96□□□□□ -0.49
LINC01238-202ENST00000426962 MCPH1Q8NEM0 835 aa11.96□□□□□ -0.49
LINC01238-202ENST00000426962 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.96□□□□□ -0.49
LINC01238-202ENST00000426962 ASAP3Q8TDY4 903 aa11.96□□□□□ -0.49
LINC01238-202ENST00000426962 ZNF558Q96NG5 402 aa11.96□□□□□ -0.49
LINC01238-202ENST00000426962 NFKBIZQ9BYH8 718 aa11.96□□□□□ -0.49
LINC01238-202ENST00000426962 BACH2Q9BYV9 841 aa11.96□□□□□ -0.49
LINC01238-202ENST00000426962 IGFLR1Q9H665 355 aa11.96□□□□□ -0.49
LINC01238-202ENST00000426962 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.96□□□□□ -0.49
LINC01238-202ENST00000426962 CLDND1Q9NY35 253 aa11.96□□□□□ -0.49
LINC01238-202ENST00000426962 HCSTQ9UBK5 93 aa11.96□□□□□ -0.49
LINC01238-202ENST00000426962 LRWD1Q9UFC0 647 aa11.96□□□□□ -0.49
LINC01238-202ENST00000426962 LZTS1Q9Y250 596 aa11.96□□□□□ -0.49
LINC01238-202ENST00000426962 PCDHB2Q9Y5E7 798 aa11.96□□□□□ -0.49
LINC01238-202ENST00000426962 CARNS1A5YM72 827 aa11.95□□□□□ -0.5
LINC01238-202ENST00000426962 INO80B-WBP1J3KQ70 363 aa11.95□□□□□ -0.5
LINC01238-202ENST00000426962 OFD1O75665 1012 aa11.95□□□□□ -0.5
LINC01238-202ENST00000426962 CSPG5O95196 566 aa11.95□□□□□ -0.5
LINC01238-202ENST00000426962 PPM1AP35813 382 aa11.95□□□□□ -0.5
LINC01238-202ENST00000426962 CCT6AP40227 531 aaKnown RBP11.95□□□□□ -0.5
LINC01238-202ENST00000426962 PRPHP41219 470 aa11.95□□□□□ -0.5
LINC01238-202ENST00000426962 ALDH7A1P49419 539 aaKnown RBP11.95□□□□□ -0.5
LINC01238-202ENST00000426962 ADAM15Q13444 863 aa11.95□□□□□ -0.5
LINC01238-202ENST00000426962 CAPSQ13938 189 aa11.95□□□□□ -0.5
LINC01238-202ENST00000426962 LONRF3Q496Y0 759 aa11.95□□□□□ -0.5
LINC01238-202ENST00000426962 POTEGQ6S5H5 508 aa11.95□□□□□ -0.5
LINC01238-202ENST00000426962 PADI6Q6TGC4 694 aa11.95□□□□□ -0.5
LINC01238-202ENST00000426962 GLB1LQ6UWU2 654 aa11.95□□□□□ -0.5
LINC01238-202ENST00000426962 DTHD1Q6ZMT9 781 aa11.95□□□□□ -0.5
LINC01238-202ENST00000426962 MAEAQ7L5Y9 396 aa11.95□□□□□ -0.5
LINC01238-202ENST00000426962 CNNM3Q8NE01 707 aa11.95□□□□□ -0.5
LINC01238-202ENST00000426962 MRPS27Q92552 414 aaKnown RBP11.95□□□□□ -0.5
LINC01238-202ENST00000426962 LPPQ93052 612 aa11.95□□□□□ -0.5
LINC01238-202ENST00000426962 POLR3FQ9H1D9 316 aaPredicted RBP11.95□□□□□ -0.5
LINC01238-202ENST00000426962 TLR9Q9NR96 1032 aa11.95□□□□□ -0.5
LINC01238-202ENST00000426962 SPG21Q9NZD8 308 aa11.95□□□□□ -0.5
LINC01238-202ENST00000426962 FNDC1Q4ZHG4 1894 aaPredicted RBP11.95□□□□□ -0.5
LINC01238-202ENST00000426962 ARHGEF35A5YM69 484 aa11.94□□□□□ -0.5
LINC01238-202ENST00000426962 GRXCR2A6NFK2 248 aa11.94□□□□□ -0.5
LINC01238-202ENST00000426962 H3BQ06 376 aaPredicted RBP11.94□□□□□ -0.5
LINC01238-202ENST00000426962 TSPAN1O60635 241 aa11.94□□□□□ -0.5
LINC01238-202ENST00000426962 CYP11B2P19099 503 aa11.94□□□□□ -0.5
LINC01238-202ENST00000426962 NCLP19338 710 aaKnown RBP11.94□□□□□ -0.5
LINC01238-202ENST00000426962 GTF2F1P35269 517 aaKnown RBP eCLIP11.94□□□□□ -0.5
LINC01238-202ENST00000426962 LTBRP36941 435 aa11.94□□□□□ -0.5
LINC01238-202ENST00000426962 BCAR1P56945 870 aa11.94□□□□□ -0.5
LINC01238-202ENST00000426962 ERVFC1P60507 584 aa11.94□□□□□ -0.5
LINC01238-202ENST00000426962 MBTD1Q05BQ5 628 aa11.94□□□□□ -0.5
LINC01238-202ENST00000426962 CUL4AQ13619 759 aa11.94□□□□□ -0.5
LINC01238-202ENST00000426962 ECM1Q16610 540 aa11.94□□□□□ -0.5
LINC01238-202ENST00000426962 NOMO2Q5JPE7 1267 aa11.94□□□□□ -0.5
LINC01238-202ENST00000426962 UBXN11Q5T124 520 aa11.94□□□□□ -0.5
LINC01238-202ENST00000426962 PTCRAQ6ISU1 281 aaPredicted RBP11.94□□□□□ -0.5
LINC01238-202ENST00000426962 NOTUMQ6P988 496 aa11.94□□□□□ -0.5
LINC01238-202ENST00000426962 ADGRD2Q7Z7M1 963 aa11.94□□□□□ -0.5
LINC01238-202ENST00000426962 CCDC51Q96ER9 411 aa11.94□□□□□ -0.5
LINC01238-202ENST00000426962 NECAB3Q96P71 396 aaPredicted RBP11.94□□□□□ -0.5
LINC01238-202ENST00000426962 TLE6Q9H808 572 aa11.94□□□□□ -0.5
LINC01238-202ENST00000426962 UBN1Q9NPG3 1134 aa11.94□□□□□ -0.5
LINC01238-202ENST00000426962 GPRC5CQ9NQ84 441 aa11.94□□□□□ -0.5
LINC01238-202ENST00000426962 KANSL3Q9P2N6 904 aa11.94□□□□□ -0.5
LINC01238-202ENST00000426962 KIAA1024Q9UPX6 916 aa11.94□□□□□ -0.5
LINC01238-202ENST00000426962 CNTNAP2Q9UHC6 1331 aa11.93□□□□□ -0.5
LINC01238-202ENST00000426962 LRRIQ4A6NIV6 560 aa11.93□□□□□ -0.5
LINC01238-202ENST00000426962 MEIS3P2A8K0S8 358 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms