RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 ZHX3Q9H4I2 956 aa16.38■□□□□ 0.21
TMEM248-204ENST00000424964 C1orf112Q9NSG2 853 aa16.38■□□□□ 0.21
TMEM248-204ENST00000424964 MSRAQ9UJ68 235 aa16.38■□□□□ 0.21
TMEM248-204ENST00000424964 PIN4Q9Y237 131 aaKnown RBP16.38■□□□□ 0.21
TMEM248-204ENST00000424964 PTPRSQ13332 1948 aa16.37■□□□□ 0.21
TMEM248-204ENST00000424964 TTC3P53804 2025 aa16.37■□□□□ 0.21
TMEM248-204ENST00000424964 A0A1B0GVL5 298 aa16.37■□□□□ 0.21
TMEM248-204ENST00000424964 GOLGA6L4A6NEF3 574 aa16.37■□□□□ 0.21
TMEM248-204ENST00000424964 SOX1O00570 391 aaPredicted RBP16.37■□□□□ 0.21
TMEM248-204ENST00000424964 TLL1O43897 1013 aa16.37■□□□□ 0.21
TMEM248-204ENST00000424964 FAM13AO94988 1023 aa16.37■□□□□ 0.21
TMEM248-204ENST00000424964 LIG1P18858 919 aa16.37■□□□□ 0.21
TMEM248-204ENST00000424964 NPTX2P47972 431 aa16.37■□□□□ 0.21
TMEM248-204ENST00000424964 MBTD1Q05BQ5 628 aa16.37■□□□□ 0.21
TMEM248-204ENST00000424964 DSC3Q14574 896 aa16.37■□□□□ 0.21
TMEM248-204ENST00000424964 SLC24A5Q71RS6 500 aa16.37■□□□□ 0.21
TMEM248-204ENST00000424964 DYMQ7RTS9 669 aa16.37■□□□□ 0.21
TMEM248-204ENST00000424964 TOP1MTQ969P6 601 aa16.37■□□□□ 0.21
TMEM248-204ENST00000424964 LRCH3Q96II8 777 aa16.37■□□□□ 0.21
TMEM248-204ENST00000424964 REEP2Q9BRK0 252 aa16.37■□□□□ 0.21
TMEM248-204ENST00000424964 PYM1Q9BRP8 204 aaKnown RBP16.37■□□□□ 0.21
TMEM248-204ENST00000424964 KIFC3Q9BVG8 833 aa16.37■□□□□ 0.21
TMEM248-204ENST00000424964 CUEDC2Q9H467 287 aa16.37■□□□□ 0.21
TMEM248-204ENST00000424964 C17orf75Q9HAS0 396 aa16.37■□□□□ 0.21
TMEM248-204ENST00000424964 KMT5AQ9NQR1 393 aa16.37■□□□□ 0.21
TMEM248-204ENST00000424964 CHST12Q9NRB3 414 aa16.37■□□□□ 0.21
TMEM248-204ENST00000424964 RGS18Q9NS28 235 aa16.37■□□□□ 0.21
TMEM248-204ENST00000424964 DACT1Q9NYF0 836 aa16.37■□□□□ 0.21
TMEM248-204ENST00000424964 KCNH3Q9ULD8 1083 aa16.37■□□□□ 0.21
TMEM248-204ENST00000424964 LRFN2Q9ULH4 789 aa16.37■□□□□ 0.21
TMEM248-204ENST00000424964 ODF2LQ9ULJ1 636 aa16.37■□□□□ 0.21
TMEM248-204ENST00000424964 MYMKA6NI61 221 aa16.36■□□□□ 0.21
TMEM248-204ENST00000424964 TBCAO75347 108 aaKnown RBP16.36■□□□□ 0.21
TMEM248-204ENST00000424964 GJB5O95377 273 aa16.36■□□□□ 0.21
TMEM248-204ENST00000424964 PLS3P13797 630 aa16.36■□□□□ 0.21
TMEM248-204ENST00000424964 PBX2P40425 430 aa16.36■□□□□ 0.21
TMEM248-204ENST00000424964 SARSP49591 514 aaKnown RBP16.36■□□□□ 0.21
TMEM248-204ENST00000424964 GIT2Q14161 759 aa16.36■□□□□ 0.21
TMEM248-204ENST00000424964 PCBP1Q15365 356 aaKnown RBP eCLIP16.36■□□□□ 0.21
TMEM248-204ENST00000424964 RAB30Q15771 203 aa16.36■□□□□ 0.21
TMEM248-204ENST00000424964 E2F4Q16254 413 aa16.36■□□□□ 0.21
TMEM248-204ENST00000424964 MAPK6Q16659 721 aa16.36■□□□□ 0.21
TMEM248-204ENST00000424964 TMEM132AQ24JP5 1023 aa16.36■□□□□ 0.21
TMEM248-204ENST00000424964 CDCA2Q69YH5 1023 aaPredicted RBP16.36■□□□□ 0.21
TMEM248-204ENST00000424964 TWF2Q6IBS0 349 aaKnown RBP16.36■□□□□ 0.21
TMEM248-204ENST00000424964 MYCT1Q8N699 235 aa16.36■□□□□ 0.21
TMEM248-204ENST00000424964 DDX12PQ92771 950 aa16.36■□□□□ 0.21
TMEM248-204ENST00000424964 STAMQ92783 540 aa16.36■□□□□ 0.21
TMEM248-204ENST00000424964 PBX4Q9BYU1 374 aa16.36■□□□□ 0.21
TMEM248-204ENST00000424964 AGPAT5Q9NUQ2 364 aa16.36■□□□□ 0.21
TMEM248-204ENST00000424964 LARSQ9P2J5 1176 aaKnown RBP16.36■□□□□ 0.21
TMEM248-204ENST00000424964 KCNG1Q9UIX4 513 aa16.36■□□□□ 0.21
TMEM248-204ENST00000424964 PCDHB7Q9Y5E2 793 aa16.36■□□□□ 0.21
TMEM248-204ENST00000424964 PCDHA11Q9Y5I1 949 aa16.36■□□□□ 0.21
TMEM248-204ENST00000424964 GBF1Q92538 1859 aa16.35■□□□□ 0.21
TMEM248-204ENST00000424964 C9IYK1 514 aa16.35■□□□□ 0.21
TMEM248-204ENST00000424964 K7ERI5 159 aa16.35■□□□□ 0.21
TMEM248-204ENST00000424964 SLC16A4O15374 487 aa16.35■□□□□ 0.21
TMEM248-204ENST00000424964 TSPAN1O60635 241 aa16.35■□□□□ 0.21
TMEM248-204ENST00000424964 STAG3L1P0CL83 205 aa16.35■□□□□ 0.21
TMEM248-204ENST00000424964 MYOGP15173 224 aa16.35■□□□□ 0.21
TMEM248-204ENST00000424964 PFKFB1P16118 471 aa16.35■□□□□ 0.21
TMEM248-204ENST00000424964 EFNA5P52803 228 aa16.35■□□□□ 0.21
TMEM248-204ENST00000424964 SMTNP53814 917 aa16.35■□□□□ 0.21
TMEM248-204ENST00000424964 AMPD3Q01432 767 aa16.35■□□□□ 0.21
TMEM248-204ENST00000424964 CSPP1Q1MSJ5 1256 aa16.35■□□□□ 0.21
TMEM248-204ENST00000424964 NPAS4Q8IUM7 802 aa16.35■□□□□ 0.21
TMEM248-204ENST00000424964 FSIP1Q8NA03 581 aa16.35■□□□□ 0.21
TMEM248-204ENST00000424964 CPB2Q96IY4 423 aa16.35■□□□□ 0.21
TMEM248-204ENST00000424964 RAD9AQ99638 391 aa16.35■□□□□ 0.21
TMEM248-204ENST00000424964 LRRC27Q9C0I9 530 aa16.35■□□□□ 0.21
TMEM248-204ENST00000424964 PARVGQ9HBI0 331 aa16.35■□□□□ 0.21
TMEM248-204ENST00000424964 PRMT7Q9NVM4 692 aaPredicted RBP16.35■□□□□ 0.21
TMEM248-204ENST00000424964 RNF216Q9NWF9 866 aaPredicted RBP16.35■□□□□ 0.21
TMEM248-204ENST00000424964 A0A1W2PQ27 194 aa16.34■□□□□ 0.21
TMEM248-204ENST00000424964 A0A1W2PQ64 194 aa16.34■□□□□ 0.21
TMEM248-204ENST00000424964 A0A1W2PQD8 194 aa16.34■□□□□ 0.21
TMEM248-204ENST00000424964 PRKCBP05771 671 aa16.34■□□□□ 0.21
TMEM248-204ENST00000424964 DNAJB2P25686 324 aa16.34■□□□□ 0.21
TMEM248-204ENST00000424964 AXLP30530 894 aa16.34■□□□□ 0.21
TMEM248-204ENST00000424964 HOXA11P31270 313 aaPredicted RBP16.34■□□□□ 0.21
TMEM248-204ENST00000424964 SYKP43405 635 aa16.34■□□□□ 0.21
TMEM248-204ENST00000424964 FXR1P51114 621 aaKnown RBP eCLIP16.34■□□□□ 0.21
TMEM248-204ENST00000424964 CEP57L1Q8IYX8 460 aa16.34■□□□□ 0.21
TMEM248-204ENST00000424964 RNF169Q8NCN4 708 aa16.34■□□□□ 0.21
TMEM248-204ENST00000424964 SPIRE2Q8WWL2 714 aa16.34■□□□□ 0.21
TMEM248-204ENST00000424964 MRPS27Q92552 414 aaKnown RBP16.34■□□□□ 0.21
TMEM248-204ENST00000424964 TIFAQ96CG3 184 aa16.34■□□□□ 0.21
TMEM248-204ENST00000424964 YME1L1Q96TA2 773 aa16.34■□□□□ 0.21
TMEM248-204ENST00000424964 TNMDQ9H2S6 317 aa16.34■□□□□ 0.21
TMEM248-204ENST00000424964 FZD8Q9H461 694 aa16.34■□□□□ 0.21
TMEM248-204ENST00000424964 SERTAD1Q9UHV2 236 aa16.34■□□□□ 0.21
TMEM248-204ENST00000424964 YBX2Q9Y2T7 364 aaKnown RBP16.34■□□□□ 0.21
TMEM248-204ENST00000424964 INSL6Q9Y581 213 aa16.34■□□□□ 0.21
TMEM248-204ENST00000424964 ADGRA3Q8IWK6 1321 aa16.34■□□□□ 0.21
TMEM248-204ENST00000424964 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.33■□□□□ 0.2
TMEM248-204ENST00000424964 B4GALT5O43286 388 aa16.33■□□□□ 0.2
TMEM248-204ENST00000424964 IDEP14735 1019 aa16.33■□□□□ 0.2
TMEM248-204ENST00000424964 ARF4P18085 180 aaPredicted RBP16.33■□□□□ 0.2
TMEM248-204ENST00000424964 NDUFA8P51970 172 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms