RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 PTPAQ15257 358 aa24.74■■□□□ 1.55
PTCHD3P2-201ENST00000424937 CCDC85BQ15834 202 aaPredicted RBP24.74■■□□□ 1.55
PTCHD3P2-201ENST00000424937 BSNDQ8WZ55 320 aa24.74■■□□□ 1.55
PTCHD3P2-201ENST00000424937 CLP1Q92989 425 aaKnown RBP24.74■■□□□ 1.55
PTCHD3P2-201ENST00000424937 MTCH2Q9Y6C9 303 aa24.74■■□□□ 1.55
PTCHD3P2-201ENST00000424937 HOXA2O43364 376 aa24.73■■□□□ 1.55
PTCHD3P2-201ENST00000424937 ATF7P17544 494 aaPredicted RBP24.73■■□□□ 1.55
PTCHD3P2-201ENST00000424937 MARCKSP29966 332 aaPredicted RBP24.73■■□□□ 1.55
PTCHD3P2-201ENST00000424937 LONP1P36776 959 aaKnown RBP24.73■■□□□ 1.55
PTCHD3P2-201ENST00000424937 ABI1Q8IZP0 508 aa24.73■■□□□ 1.55
PTCHD3P2-201ENST00000424937 USP28Q96RU2 1077 aa24.73■■□□□ 1.55
PTCHD3P2-201ENST00000424937 NFKBIZQ9BYH8 718 aa24.73■■□□□ 1.55
PTCHD3P2-201ENST00000424937 FAM105AQ9NUU6 356 aa24.73■■□□□ 1.55
PTCHD3P2-201ENST00000424937 RNF19AQ9NV58 838 aa24.73■■□□□ 1.55
PTCHD3P2-201ENST00000424937 TSPAN1O60635 241 aa24.72■■□□□ 1.55
PTCHD3P2-201ENST00000424937 SSBP05455 408 aaKnown RBP eCLIP24.72■■□□□ 1.55
PTCHD3P2-201ENST00000424937 SKIP12755 728 aa24.72■■□□□ 1.55
PTCHD3P2-201ENST00000424937 BMPR1AP36894 532 aa24.72■■□□□ 1.55
PTCHD3P2-201ENST00000424937 UBA7P41226 1012 aa24.72■■□□□ 1.55
PTCHD3P2-201ENST00000424937 RAB27AP51159 221 aa24.72■■□□□ 1.55
PTCHD3P2-201ENST00000424937 GPM6BQ13491 265 aa24.72■■□□□ 1.55
PTCHD3P2-201ENST00000424937 PCBP1Q15365 356 aaKnown RBP eCLIP24.72■■□□□ 1.55
PTCHD3P2-201ENST00000424937 TMEM119Q4V9L6 283 aa24.72■■□□□ 1.55
PTCHD3P2-201ENST00000424937 SPOUT1Q5T280 376 aaKnown RBP24.72■■□□□ 1.55
PTCHD3P2-201ENST00000424937 ZNF598Q86UK7 904 aaKnown RBP24.72■■□□□ 1.55
PTCHD3P2-201ENST00000424937 ZBTB8OSQ8IWT0 167 aa24.72■■□□□ 1.55
PTCHD3P2-201ENST00000424937 RASSF8Q8NHQ8 419 aa24.72■■□□□ 1.55
PTCHD3P2-201ENST00000424937 CALML4Q96GE6 196 aa24.72■■□□□ 1.55
PTCHD3P2-201ENST00000424937 RUSC1Q9BVN2 902 aa24.72■■□□□ 1.55
PTCHD3P2-201ENST00000424937 TRAIPQ9BWF2 469 aa24.72■■□□□ 1.55
PTCHD3P2-201ENST00000424937 TMEM117Q9H0C3 514 aa24.72■■□□□ 1.55
PTCHD3P2-201ENST00000424937 POLD4Q9HCU8 107 aa24.72■■□□□ 1.55
PTCHD3P2-201ENST00000424937 HCSTQ9UBK5 93 aa24.72■■□□□ 1.55
PTCHD3P2-201ENST00000424937 C5orf67F2Z3F1 127 aa24.71■■□□□ 1.55
PTCHD3P2-201ENST00000424937 H3BNC9 293 aa24.71■■□□□ 1.55
PTCHD3P2-201ENST00000424937 EOMESO95936 686 aa24.71■■□□□ 1.55
PTCHD3P2-201ENST00000424937 POU3F3P20264 500 aaPredicted RBP24.71■■□□□ 1.55
PTCHD3P2-201ENST00000424937 HOXA11P31270 313 aaPredicted RBP24.71■■□□□ 1.55
PTCHD3P2-201ENST00000424937 NAMPTP43490 491 aa24.71■■□□□ 1.55
PTCHD3P2-201ENST00000424937 PPP2R5AQ15172 486 aa24.71■■□□□ 1.55
PTCHD3P2-201ENST00000424937 LONRF3Q496Y0 759 aa24.71■■□□□ 1.55
PTCHD3P2-201ENST00000424937 CLLU1OSQ5K130 101 aa24.71■■□□□ 1.55
PTCHD3P2-201ENST00000424937 CDCA2Q69YH5 1023 aaPredicted RBP24.71■■□□□ 1.55
PTCHD3P2-201ENST00000424937 KIFAP3Q92845 792 aa24.71■■□□□ 1.55
PTCHD3P2-201ENST00000424937 CPB2Q96IY4 423 aa24.71■■□□□ 1.55
PTCHD3P2-201ENST00000424937 SLC26A4O43511 780 aa24.7■■□□□ 1.54
PTCHD3P2-201ENST00000424937 RB1P06400 928 aa24.7■■□□□ 1.54
PTCHD3P2-201ENST00000424937 ZSCAN22P10073 491 aaPredicted RBP24.7■■□□□ 1.54
PTCHD3P2-201ENST00000424937 AXLP30530 894 aa24.7■■□□□ 1.54
PTCHD3P2-201ENST00000424937 NCBP1Q09161 790 aaKnown RBP24.7■■□□□ 1.54
PTCHD3P2-201ENST00000424937 AMHR2Q16671 573 aa24.7■■□□□ 1.54
PTCHD3P2-201ENST00000424937 RINT1Q6NUQ1 792 aa24.7■■□□□ 1.54
PTCHD3P2-201ENST00000424937 NOTUMQ6P988 496 aa24.7■■□□□ 1.54
PTCHD3P2-201ENST00000424937 KCTD17Q8N5Z5 321 aa24.7■■□□□ 1.54
PTCHD3P2-201ENST00000424937 DEPTORQ8TB45 409 aa24.7■■□□□ 1.54
PTCHD3P2-201ENST00000424937 HELQQ8TDG4 1101 aa24.7■■□□□ 1.54
PTCHD3P2-201ENST00000424937 LPPQ93052 612 aa24.7■■□□□ 1.54
PTCHD3P2-201ENST00000424937 IFT74Q96LB3 600 aa24.7■■□□□ 1.54
PTCHD3P2-201ENST00000424937 CASD1Q96PB1 797 aa24.7■■□□□ 1.54
PTCHD3P2-201ENST00000424937 C11orf84Q9BUA3 381 aaPredicted RBP24.7■■□□□ 1.54
PTCHD3P2-201ENST00000424937 CSRNP2Q9H175 543 aa24.7■■□□□ 1.54
PTCHD3P2-201ENST00000424937 FBXO2Q9UK22 296 aaPredicted RBP24.7■■□□□ 1.54
PTCHD3P2-201ENST00000424937 PRUNE2Q8WUY3 3088 aa24.7■■□□□ 1.54
PTCHD3P2-201ENST00000424937 TDRD15B5MCY1 1934 aaKnown RBP24.69■■□□□ 1.54
PTCHD3P2-201ENST00000424937 B4GALT5O43286 388 aa24.69■■□□□ 1.54
PTCHD3P2-201ENST00000424937 HIP1RO75146 1068 aa24.69■■□□□ 1.54
PTCHD3P2-201ENST00000424937 PDIA4P13667 645 aaKnown RBP24.69■■□□□ 1.54
PTCHD3P2-201ENST00000424937 KARSQ15046 597 aaKnown RBP24.69■■□□□ 1.54
PTCHD3P2-201ENST00000424937 LRRC43Q8N309 656 aa24.69■■□□□ 1.54
PTCHD3P2-201ENST00000424937 KIFC3Q9BVG8 833 aa24.69■■□□□ 1.54
PTCHD3P2-201ENST00000424937 PLVAPQ9BX97 442 aa24.69■■□□□ 1.54
PTCHD3P2-201ENST00000424937 C2orf40Q9H1Z8 148 aa24.69■■□□□ 1.54
PTCHD3P2-201ENST00000424937 LMCD1Q9NZU5 365 aa24.69■■□□□ 1.54
PTCHD3P2-201ENST00000424937 PCDHB2Q9Y5E7 798 aa24.69■■□□□ 1.54
PTCHD3P2-201ENST00000424937 MYO7AQ13402 2215 aa24.69■■□□□ 1.54
PTCHD3P2-201ENST00000424937 REV3LO60673 3130 aa24.68■■□□□ 1.54
PTCHD3P2-201ENST00000424937 F13A1P00488 732 aa24.68■■□□□ 1.54
PTCHD3P2-201ENST00000424937 PLA2G4BP0C869 781 aa24.68■■□□□ 1.54
PTCHD3P2-201ENST00000424937 ARF4P18085 180 aaPredicted RBP24.68■■□□□ 1.54
PTCHD3P2-201ENST00000424937 PLCG1P19174 1290 aa24.68■■□□□ 1.54
PTCHD3P2-201ENST00000424937 PKP1Q13835 747 aa24.68■■□□□ 1.54
PTCHD3P2-201ENST00000424937 PTPROQ16827 1216 aa24.68■■□□□ 1.54
PTCHD3P2-201ENST00000424937 SPECC1Q5M775 1068 aa24.68■■□□□ 1.54
PTCHD3P2-201ENST00000424937 UBXN11Q5T124 520 aa24.68■■□□□ 1.54
PTCHD3P2-201ENST00000424937 C1orf186Q6ZWK4 172 aa24.68■■□□□ 1.54
PTCHD3P2-201ENST00000424937 CCDC51Q96ER9 411 aa24.68■■□□□ 1.54
PTCHD3P2-201ENST00000424937 ZNF396Q96N95 335 aaPredicted RBP24.68■■□□□ 1.54
PTCHD3P2-201ENST00000424937 CLIC6Q96NY7 704 aa24.68■■□□□ 1.54
PTCHD3P2-201ENST00000424937 TYW1Q9NV66 732 aaKnown RBP24.68■■□□□ 1.54
PTCHD3P2-201ENST00000424937 PRMT7Q9NVM4 692 aaPredicted RBP24.68■■□□□ 1.54
PTCHD3P2-201ENST00000424937 SRPRBQ9Y5M8 271 aaKnown RBP24.68■■□□□ 1.54
PTCHD3P2-201ENST00000424937 LIG1P18858 919 aa24.67■■□□□ 1.54
PTCHD3P2-201ENST00000424937 NASPP49321 788 aaPredicted RBP24.67■■□□□ 1.54
PTCHD3P2-201ENST00000424937 SLC12A3P55017 1021 aa24.67■■□□□ 1.54
PTCHD3P2-201ENST00000424937 RAD51AP2Q09MP3 1159 aa24.67■■□□□ 1.54
PTCHD3P2-201ENST00000424937 SLC39A14Q15043 492 aa24.67■■□□□ 1.54
PTCHD3P2-201ENST00000424937 STK38Q15208 465 aa24.67■■□□□ 1.54
PTCHD3P2-201ENST00000424937 SYT2Q8N9I0 419 aaPredicted RBP24.67■■□□□ 1.54
PTCHD3P2-201ENST00000424937 LRRC15Q8TF66 581 aa24.67■■□□□ 1.54
PTCHD3P2-201ENST00000424937 PGBD4Q96DM1 585 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms