RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 ARVCFO00192 962 aa14.79□□□□□ -0.04
PRPF39-202ENST00000424478 MAPTP10636 758 aaKnown RBP14.79□□□□□ -0.04
PRPF39-202ENST00000424478 NCKAP1LP55160 1127 aa14.79□□□□□ -0.04
PRPF39-202ENST00000424478 SYCP3Q8IZU3 236 aa14.79□□□□□ -0.04
PRPF39-202ENST00000424478 CPB2Q96IY4 423 aa14.79□□□□□ -0.04
PRPF39-202ENST00000424478 A0A0U1RQG5 324 aaPredicted RBP14.78□□□□□ -0.04
PRPF39-202ENST00000424478 SMTNP53814 917 aa14.78□□□□□ -0.04
PRPF39-202ENST00000424478 PAK1Q13153 545 aa14.78□□□□□ -0.04
PRPF39-202ENST00000424478 SERINC5Q86VE9 423 aa14.78□□□□□ -0.04
PRPF39-202ENST00000424478 MLKLQ8NB16 471 aa14.78□□□□□ -0.04
PRPF39-202ENST00000424478 TCP11Q8WWU5 503 aa14.78□□□□□ -0.04
PRPF39-202ENST00000424478 FAM84AQ96KN4 292 aa14.78□□□□□ -0.04
PRPF39-202ENST00000424478 TARS2Q9BW92 718 aaKnown RBP14.78□□□□□ -0.04
PRPF39-202ENST00000424478 TBX20Q9UMR3 447 aa14.78□□□□□ -0.04
PRPF39-202ENST00000424478 TGFB1I1O43294 461 aa14.78□□□□□ -0.04
PRPF39-202ENST00000424478 GPR32O75388 356 aa14.78□□□□□ -0.04
PRPF39-202ENST00000424478 PPP1R37O75864 691 aa14.78□□□□□ -0.04
PRPF39-202ENST00000424478 ATP1A3P13637 1013 aa14.78□□□□□ -0.04
PRPF39-202ENST00000424478 NAMPTP43490 491 aa14.78□□□□□ -0.04
PRPF39-202ENST00000424478 RDH13Q8NBN7 331 aa14.78□□□□□ -0.04
PRPF39-202ENST00000424478 BICD1Q96G01 975 aa14.78□□□□□ -0.04
PRPF39-202ENST00000424478 FANCLQ9NW38 375 aa14.78□□□□□ -0.04
PRPF39-202ENST00000424478 ARHGAP28Q9P2N2 729 aa14.78□□□□□ -0.04
PRPF39-202ENST00000424478 ANKFY1Q9P2R3 1169 aa14.78□□□□□ -0.04
PRPF39-202ENST00000424478 GOLGA8IPA6NC78 632 aa14.77□□□□□ -0.04
PRPF39-202ENST00000424478 GOLGA8JA6NMD2 632 aa14.77□□□□□ -0.04
PRPF39-202ENST00000424478 K7ERI5 159 aa14.77□□□□□ -0.04
PRPF39-202ENST00000424478 IQCB1Q15051 598 aa14.77□□□□□ -0.04
PRPF39-202ENST00000424478 PPP1R12CQ9BZL4 782 aa14.77□□□□□ -0.04
PRPF39-202ENST00000424478 KCTD10Q9H3F6 313 aa14.77□□□□□ -0.04
PRPF39-202ENST00000424478 CDY2AQ9Y6F7 541 aa14.77□□□□□ -0.04
PRPF39-202ENST00000424478 SMIM35A0A1B0GVV1 85 aa14.77□□□□□ -0.05
PRPF39-202ENST00000424478 CABYRO75952 493 aa14.77□□□□□ -0.05
PRPF39-202ENST00000424478 CHRNA1P02708 482 aa14.77□□□□□ -0.05
PRPF39-202ENST00000424478 GNAT1P11488 350 aa14.77□□□□□ -0.05
PRPF39-202ENST00000424478 CYP2J2P51589 502 aa14.77□□□□□ -0.05
PRPF39-202ENST00000424478 TLE2Q04725 743 aa14.77□□□□□ -0.05
PRPF39-202ENST00000424478 PSMD2Q13200 908 aa14.77□□□□□ -0.05
PRPF39-202ENST00000424478 NCAPHQ15003 741 aa14.77□□□□□ -0.05
PRPF39-202ENST00000424478 LRRC26Q2I0M4 334 aa14.77□□□□□ -0.05
PRPF39-202ENST00000424478 SLC39A4Q6P5W5 647 aa14.77□□□□□ -0.05
PRPF39-202ENST00000424478 SLC39A5Q6ZMH5 540 aa14.77□□□□□ -0.05
PRPF39-202ENST00000424478 ZBTB33Q86T24 672 aa14.77□□□□□ -0.05
PRPF39-202ENST00000424478 P2RX5Q93086 422 aa14.77□□□□□ -0.05
PRPF39-202ENST00000424478 DUSP9Q99956 384 aaKnown RBP14.77□□□□□ -0.05
PRPF39-202ENST00000424478 CBWD1Q9BRT8 395 aa14.77□□□□□ -0.05
PRPF39-202ENST00000424478 ADAMTS10Q9H324 1103 aa14.77□□□□□ -0.05
PRPF39-202ENST00000424478 NFE2L3Q9Y4A8 694 aa14.77□□□□□ -0.05
PRPF39-202ENST00000424478 CDH23Q9H251 3354 aa14.77□□□□□ -0.05
PRPF39-202ENST00000424478 PSMA7O14818 248 aa14.77□□□□□ -0.05
PRPF39-202ENST00000424478 MXD4Q14582 209 aaPredicted RBP14.77□□□□□ -0.05
PRPF39-202ENST00000424478 ZNF618Q5T7W0 954 aa14.77□□□□□ -0.05
PRPF39-202ENST00000424478 GUF1Q8N442 669 aaKnown RBP14.77□□□□□ -0.05
PRPF39-202ENST00000424478 STRA6Q9BX79 667 aa14.77□□□□□ -0.05
PRPF39-202ENST00000424478 RNF19AQ9NV58 838 aa14.77□□□□□ -0.05
PRPF39-202ENST00000424478 SIP14410 1827 aa14.76□□□□□ -0.05
PRPF39-202ENST00000424478 HNRNPDLO14979 420 aaKnown RBP14.76□□□□□ -0.05
PRPF39-202ENST00000424478 MBTD1Q05BQ5 628 aa14.76□□□□□ -0.05
PRPF39-202ENST00000424478 KNOP1Q1ED39 458 aaKnown RBP14.76□□□□□ -0.05
PRPF39-202ENST00000424478 FAM126BQ8IXS8 530 aa14.76□□□□□ -0.05
PRPF39-202ENST00000424478 ZNF507Q8TCN5 953 aa14.76□□□□□ -0.05
PRPF39-202ENST00000424478 SAAL1Q96ER3 474 aa14.76□□□□□ -0.05
PRPF39-202ENST00000424478 JPH2Q9BR39 696 aaPredicted RBP14.76□□□□□ -0.05
PRPF39-202ENST00000424478 TIPINQ9BVW5 301 aa14.76□□□□□ -0.05
PRPF39-202ENST00000424478 HAPLN2Q9GZV7 340 aa14.76□□□□□ -0.05
PRPF39-202ENST00000424478 HSD3B7Q9H2F3 369 aa14.76□□□□□ -0.05
PRPF39-202ENST00000424478 SEL1LQ9UBV2 794 aa14.76□□□□□ -0.05
PRPF39-202ENST00000424478 GHRP10912 638 aa14.76□□□□□ -0.05
PRPF39-202ENST00000424478 CASP4P49662 377 aa14.76□□□□□ -0.05
PRPF39-202ENST00000424478 PTENP60484 403 aa14.76□□□□□ -0.05
PRPF39-202ENST00000424478 GTF2BQ00403 316 aa14.76□□□□□ -0.05
PRPF39-202ENST00000424478 TMEM132AQ24JP5 1023 aa14.76□□□□□ -0.05
PRPF39-202ENST00000424478 TTI2Q6NXR4 508 aa14.76□□□□□ -0.05
PRPF39-202ENST00000424478 TET1Q8NFU7 2136 aa14.76□□□□□ -0.05
PRPF39-202ENST00000424478 FAM200AQ8TCP9 573 aa14.76□□□□□ -0.05
PRPF39-202ENST00000424478 SPIRE2Q8WWL2 714 aa14.76□□□□□ -0.05
PRPF39-202ENST00000424478 NTPCRQ9BSD7 190 aaKnown RBP14.76□□□□□ -0.05
PRPF39-202ENST00000424478 BECN2A8MW95 431 aa14.75□□□□□ -0.05
PRPF39-202ENST00000424478 PRKCBP05771 671 aa14.75□□□□□ -0.05
PRPF39-202ENST00000424478 CDK7P50613 346 aa14.75□□□□□ -0.05
PRPF39-202ENST00000424478 OSTNP61366 133 aa14.75□□□□□ -0.05
PRPF39-202ENST00000424478 ZBTB41Q5SVQ8 909 aa14.75□□□□□ -0.05
PRPF39-202ENST00000424478 EEF1DP3Q658K8 133 aa14.75□□□□□ -0.05
PRPF39-202ENST00000424478 SCLYQ96I15 445 aa14.75□□□□□ -0.05
PRPF39-202ENST00000424478 SRRTQ9BXP5 876 aaKnown RBP14.75□□□□□ -0.05
PRPF39-202ENST00000424478 PCDHB13Q9Y5F0 798 aa14.75□□□□□ -0.05
PRPF39-202ENST00000424478 AP5Z1O43299 807 aa14.75□□□□□ -0.05
PRPF39-202ENST00000424478 COL6A1P12109 1028 aa14.75□□□□□ -0.05
PRPF39-202ENST00000424478 ADSSP30520 456 aa14.75□□□□□ -0.05
PRPF39-202ENST00000424478 MATR3P43243 847 aaKnown RBP eCLIP14.75□□□□□ -0.05
PRPF39-202ENST00000424478 CCL23P55773 120 aa14.75□□□□□ -0.05
PRPF39-202ENST00000424478 NFX1Q12986 1120 aaKnown RBP14.75□□□□□ -0.05
PRPF39-202ENST00000424478 STIM1Q13586 685 aa14.75□□□□□ -0.05
PRPF39-202ENST00000424478 PPP2R5AQ15172 486 aa14.75□□□□□ -0.05
PRPF39-202ENST00000424478 SLC43A3Q8NBI5 491 aa14.75□□□□□ -0.05
PRPF39-202ENST00000424478 AGO3Q9H9G7 860 aaKnown RBP14.75□□□□□ -0.05
PRPF39-202ENST00000424478 NOC2LQ9Y3T9 749 aaKnown RBP14.75□□□□□ -0.05
PRPF39-202ENST00000424478 CCNE1P24864 410 aa14.75□□□□□ -0.05
PRPF39-202ENST00000424478 RTP1P59025 263 aa14.75□□□□□ -0.05
PRPF39-202ENST00000424478 GSE1Q14687 1217 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms