RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 MINDY3Q9H8M7 445 aa20.71■□□□□ 0.91
PRNP-202ENST00000424424 CLIC4Q9Y696 253 aa20.71■□□□□ 0.91
PRNP-202ENST00000424424 MTCH2Q9Y6C9 303 aa20.71■□□□□ 0.91
PRNP-202ENST00000424424 H3BNC9 293 aa20.7■□□□□ 0.9
PRNP-202ENST00000424424 GATMP50440 423 aa20.7■□□□□ 0.9
PRNP-202ENST00000424424 GPM6BQ13491 265 aa20.7■□□□□ 0.9
PRNP-202ENST00000424424 SPOUT1Q5T280 376 aaKnown RBP20.7■□□□□ 0.9
PRNP-202ENST00000424424 FAM173BQ6P4H8 233 aa20.7■□□□□ 0.9
PRNP-202ENST00000424424 ZBTB8OSQ8IWT0 167 aa20.7■□□□□ 0.9
PRNP-202ENST00000424424 MICALL1Q8N3F8 863 aa20.7■□□□□ 0.9
PRNP-202ENST00000424424 KIFAP3Q92845 792 aa20.7■□□□□ 0.9
PRNP-202ENST00000424424 IFT74Q96LB3 600 aa20.7■□□□□ 0.9
PRNP-202ENST00000424424 PLVAPQ9BX97 442 aa20.7■□□□□ 0.9
PRNP-202ENST00000424424 TMEM117Q9H0C3 514 aa20.7■□□□□ 0.9
PRNP-202ENST00000424424 C2orf40Q9H1Z8 148 aa20.7■□□□□ 0.9
PRNP-202ENST00000424424 FAM105AQ9NUU6 356 aa20.7■□□□□ 0.9
PRNP-202ENST00000424424 MRPL42Q9Y6G3 142 aaKnown RBP20.7■□□□□ 0.9
PRNP-202ENST00000424424 C5orf67F2Z3F1 127 aa20.69■□□□□ 0.9
PRNP-202ENST00000424424 LPXNO60711 386 aa20.69■□□□□ 0.9
PRNP-202ENST00000424424 FGFR1P11362 822 aa20.69■□□□□ 0.9
PRNP-202ENST00000424424 CEBPZQ03701 1054 aaKnown RBP20.69■□□□□ 0.9
PRNP-202ENST00000424424 CCDC85BQ15834 202 aaPredicted RBP20.69■□□□□ 0.9
PRNP-202ENST00000424424 PTPROQ16827 1216 aa20.69■□□□□ 0.9
PRNP-202ENST00000424424 SPRYD3Q8NCJ5 442 aa20.69■□□□□ 0.9
PRNP-202ENST00000424424 RASSF8Q8NHQ8 419 aa20.69■□□□□ 0.9
PRNP-202ENST00000424424 PGBD4Q96DM1 585 aa20.69■□□□□ 0.9
PRNP-202ENST00000424424 C11orf84Q9BUA3 381 aaPredicted RBP20.69■□□□□ 0.9
PRNP-202ENST00000424424 AAASQ9NRG9 546 aa20.69■□□□□ 0.9
PRNP-202ENST00000424424 CUL9Q8IWT3 2517 aa20.69■□□□□ 0.9
PRNP-202ENST00000424424 MYH11P35749 1972 aa20.68■□□□□ 0.9
PRNP-202ENST00000424424 NAMPTP43490 491 aa20.68■□□□□ 0.9
PRNP-202ENST00000424424 MBTD1Q05BQ5 628 aa20.68■□□□□ 0.9
PRNP-202ENST00000424424 PTPAQ15257 358 aa20.68■□□□□ 0.9
PRNP-202ENST00000424424 NOTUMQ6P988 496 aa20.68■□□□□ 0.9
PRNP-202ENST00000424424 DEPTORQ8TB45 409 aa20.68■□□□□ 0.9
PRNP-202ENST00000424424 RSPH1Q8WYR4 309 aa20.68■□□□□ 0.9
PRNP-202ENST00000424424 ZNF396Q96N95 335 aaPredicted RBP20.68■□□□□ 0.9
PRNP-202ENST00000424424 PNMA5Q96PV4 448 aa20.68■□□□□ 0.9
PRNP-202ENST00000424424 PLIN2Q99541 437 aa20.68■□□□□ 0.9
PRNP-202ENST00000424424 CHD7Q9P2D1 2997 aa20.67■□□□□ 0.9
PRNP-202ENST00000424424 ZNF623O75123 536 aa20.67■□□□□ 0.9
PRNP-202ENST00000424424 SSBP05455 408 aaKnown RBP eCLIP20.67■□□□□ 0.9
PRNP-202ENST00000424424 LINC00271P0C7V0 271 aa20.67■□□□□ 0.9
PRNP-202ENST00000424424 MARCKSP29966 332 aaPredicted RBP20.67■□□□□ 0.9
PRNP-202ENST00000424424 NAALADL2Q58DX5 795 aa20.67■□□□□ 0.9
PRNP-202ENST00000424424 RINT1Q6NUQ1 792 aa20.67■□□□□ 0.9
PRNP-202ENST00000424424 KCNK18Q7Z418 384 aa20.67■□□□□ 0.9
PRNP-202ENST00000424424 ZNF598Q86UK7 904 aaKnown RBP20.67■□□□□ 0.9
PRNP-202ENST00000424424 SYT2Q8N9I0 419 aaPredicted RBP20.67■□□□□ 0.9
PRNP-202ENST00000424424 CNNM3Q8NE01 707 aa20.67■□□□□ 0.9
PRNP-202ENST00000424424 P2RX5Q93086 422 aa20.67■□□□□ 0.9
PRNP-202ENST00000424424 CCDC51Q96ER9 411 aa20.67■□□□□ 0.9
PRNP-202ENST00000424424 TIPINQ9BVW5 301 aa20.67■□□□□ 0.9
PRNP-202ENST00000424424 PRMT7Q9NVM4 692 aaPredicted RBP20.67■□□□□ 0.9
PRNP-202ENST00000424424 PCDHB12Q9Y5F1 795 aa20.67■□□□□ 0.9
PRNP-202ENST00000424424 TSPAN1O60635 241 aa20.66■□□□□ 0.9
PRNP-202ENST00000424424 HOXA11P31270 313 aaPredicted RBP20.66■□□□□ 0.9
PRNP-202ENST00000424424 CDCA2Q69YH5 1023 aaPredicted RBP20.66■□□□□ 0.9
PRNP-202ENST00000424424 HELQQ8TDG4 1101 aa20.66■□□□□ 0.9
PRNP-202ENST00000424424 PRIMPOLQ96LW4 560 aa20.66■□□□□ 0.9
PRNP-202ENST00000424424 DRC1Q96MC2 740 aa20.66■□□□□ 0.9
PRNP-202ENST00000424424 CASD1Q96PB1 797 aa20.66■□□□□ 0.9
PRNP-202ENST00000424424 USP28Q96RU2 1077 aa20.66■□□□□ 0.9
PRNP-202ENST00000424424 MRPL9Q9BYD2 267 aaKnown RBP20.66■□□□□ 0.9
PRNP-202ENST00000424424 TYW1Q9NV66 732 aaKnown RBP20.66■□□□□ 0.9
PRNP-202ENST00000424424 PCDHB2Q9Y5E7 798 aa20.66■□□□□ 0.9
PRNP-202ENST00000424424 SRPRBQ9Y5M8 271 aaKnown RBP20.66■□□□□ 0.9
PRNP-202ENST00000424424 CDH23Q9H251 3354 aa20.66■□□□□ 0.9
PRNP-202ENST00000424424 PLA2G4BP0C869 781 aa20.65■□□□□ 0.9
PRNP-202ENST00000424424 ZSCAN22P10073 491 aaPredicted RBP20.65■□□□□ 0.9
PRNP-202ENST00000424424 ATF7P17544 494 aaPredicted RBP20.65■□□□□ 0.9
PRNP-202ENST00000424424 GRIN1Q05586 938 aa20.65■□□□□ 0.9
PRNP-202ENST00000424424 SLC39A14Q15043 492 aa20.65■□□□□ 0.9
PRNP-202ENST00000424424 MAPK6Q16659 721 aa20.65■□□□□ 0.9
PRNP-202ENST00000424424 CSPP1Q1MSJ5 1256 aa20.65■□□□□ 0.9
PRNP-202ENST00000424424 TMEM119Q4V9L6 283 aa20.65■□□□□ 0.9
PRNP-202ENST00000424424 GLB1LQ6UWU2 654 aa20.65■□□□□ 0.9
PRNP-202ENST00000424424 C1orf186Q6ZWK4 172 aa20.65■□□□□ 0.9
PRNP-202ENST00000424424 LRRC43Q8N309 656 aa20.65■□□□□ 0.9
PRNP-202ENST00000424424 BSNDQ8WZ55 320 aa20.65■□□□□ 0.9
PRNP-202ENST00000424424 MRPL38Q96DV4 380 aaKnown RBP20.65■□□□□ 0.9
PRNP-202ENST00000424424 CPB2Q96IY4 423 aa20.65■□□□□ 0.9
PRNP-202ENST00000424424 TRIM6Q9C030 488 aaPredicted RBP20.65■□□□□ 0.9
PRNP-202ENST00000424424 CCSER1Q9C0I3 900 aa20.65■□□□□ 0.9
PRNP-202ENST00000424424 LMAN2LQ9H0V9 348 aa20.65■□□□□ 0.9
PRNP-202ENST00000424424 CSRNP2Q9H175 543 aa20.65■□□□□ 0.9
PRNP-202ENST00000424424 POLD4Q9HCU8 107 aa20.65■□□□□ 0.9
PRNP-202ENST00000424424 RNF19AQ9NV58 838 aa20.65■□□□□ 0.9
PRNP-202ENST00000424424 KCND2Q9NZV8 630 aa20.65■□□□□ 0.9
PRNP-202ENST00000424424 CCDC39Q9UFE4 941 aa20.65■□□□□ 0.9
PRNP-202ENST00000424424 KCNG1Q9UIX4 513 aa20.65■□□□□ 0.9
PRNP-202ENST00000424424 MORC2Q9Y6X9 1032 aaPredicted RBP20.65■□□□□ 0.9
PRNP-202ENST00000424424 PRRC2BQ5JSZ5 2229 aaKnown RBP20.64■□□□□ 0.89
PRNP-202ENST00000424424 HIP1RO75146 1068 aa20.64■□□□□ 0.89
PRNP-202ENST00000424424 ARF4P18085 180 aaPredicted RBP20.64■□□□□ 0.89
PRNP-202ENST00000424424 LAG3P18627 525 aa20.64■□□□□ 0.89
PRNP-202ENST00000424424 GUCY2CP25092 1073 aa20.64■□□□□ 0.89
PRNP-202ENST00000424424 TXLNAP40222 546 aa20.64■□□□□ 0.89
PRNP-202ENST00000424424 EFNA5P52803 228 aa20.64■□□□□ 0.89
PRNP-202ENST00000424424 STK38Q15208 465 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms