RNA–Protein interactions for RNA: ENST00000424369.5

TRIM6-204, Transcript of tripartite motif containing 6, humanhuman

TSL 3

Gene TRIM6, Length 468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-204ENST00000424369 FIBCD1Q8N539 461 aa11.66□□□□□ -0.54
TRIM6-204ENST00000424369 TGS1Q96RS0 853 aaKnown RBP11.66□□□□□ -0.54
TRIM6-204ENST00000424369 INO80BQ9C086 356 aaPredicted RBP11.66□□□□□ -0.54
TRIM6-204ENST00000424369 C1orf112Q9NSG2 853 aa11.66□□□□□ -0.54
TRIM6-204ENST00000424369 SRPRBQ9Y5M8 271 aaKnown RBP11.66□□□□□ -0.54
TRIM6-204ENST00000424369 MRPL42Q9Y6G3 142 aaKnown RBP11.66□□□□□ -0.54
TRIM6-204ENST00000424369 COL4A6Q14031 1691 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 A0A0U1RQF3 1178 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 TSPAN1O60635 241 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 HIP1RO75146 1068 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 BMP15O95972 392 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 F13A1P00488 732 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 PLA2G4BP0C869 781 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 STAG3L1P0CL83 205 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 PLCG1P19174 1290 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 SFPQP23246 707 aaKnown RBP eCLIP11.65□□□□□ -0.54
TRIM6-204ENST00000424369 LONP1P36776 959 aaKnown RBP11.65□□□□□ -0.54
TRIM6-204ENST00000424369 PHKA2P46019 1235 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 SLC12A3P55017 1021 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 MAPK7Q13164 816 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 MCM6Q14566 821 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 AMHR2Q16671 573 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 ARSHQ5FYA8 562 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 CLLU1OSQ5K130 101 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 UBXN11Q5T124 520 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 LRRC55Q6ZSA7 311 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 ZNF598Q86UK7 904 aaKnown RBP11.65□□□□□ -0.54
TRIM6-204ENST00000424369 TMEM192Q8IY95 271 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 MICALL1Q8N3F8 863 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 LINC00301Q8NCQ3 95 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 MCPH1Q8NEM0 835 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 CASD1Q96PB1 797 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 EIF2AQ9BY44 585 aaKnown RBP11.65□□□□□ -0.54
TRIM6-204ENST00000424369 RNF39Q9H2S5 420 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 PRDM6Q9NQX0 595 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 CHST12Q9NRB3 414 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 BLOC1S4Q9NUP1 217 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 TMEM161AQ9NX61 479 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 STK24Q9Y6E0 443 aa11.65□□□□□ -0.54
TRIM6-204ENST00000424369 PRRC2BQ5JSZ5 2229 aaKnown RBP11.64□□□□□ -0.55
TRIM6-204ENST00000424369 ADGRA3Q8IWK6 1321 aa11.64□□□□□ -0.55
TRIM6-204ENST00000424369 CSPG5O95196 566 aa11.64□□□□□ -0.55
TRIM6-204ENST00000424369 EDN1P05305 212 aa11.64□□□□□ -0.55
TRIM6-204ENST00000424369 BMPR1AP36894 532 aa11.64□□□□□ -0.55
TRIM6-204ENST00000424369 NASPP49321 788 aaPredicted RBP11.64□□□□□ -0.55
TRIM6-204ENST00000424369 AFF1P51825 1210 aaKnown RBP11.64□□□□□ -0.55
TRIM6-204ENST00000424369 DNM1Q05193 864 aaKnown RBP11.64□□□□□ -0.55
TRIM6-204ENST00000424369 TFDP1Q14186 410 aa11.64□□□□□ -0.55
TRIM6-204ENST00000424369 STK38Q15208 465 aa11.64□□□□□ -0.55
TRIM6-204ENST00000424369 SYT2Q8N9I0 419 aaPredicted RBP11.64□□□□□ -0.55
TRIM6-204ENST00000424369 FBXO22Q8NEZ5 403 aa11.64□□□□□ -0.55
TRIM6-204ENST00000424369 MAFAQ8NHW3 353 aaPredicted RBP11.64□□□□□ -0.55
TRIM6-204ENST00000424369 HELQQ8TDG4 1101 aa11.64□□□□□ -0.55
TRIM6-204ENST00000424369 SYMPKQ92797 1274 aaKnown RBP11.64□□□□□ -0.55
TRIM6-204ENST00000424369 CDK5RAP3Q96JB5 506 aa11.64□□□□□ -0.55
TRIM6-204ENST00000424369 AK8Q96MA6 479 aa11.64□□□□□ -0.55
TRIM6-204ENST00000424369 GAS2L1Q99501 681 aaPredicted RBP11.64□□□□□ -0.55
TRIM6-204ENST00000424369 AGPAT5Q9NUQ2 364 aa11.64□□□□□ -0.55
TRIM6-204ENST00000424369 FAM105AQ9NUU6 356 aa11.64□□□□□ -0.55
TRIM6-204ENST00000424369 TYW1Q9NV66 732 aaKnown RBP11.64□□□□□ -0.55
TRIM6-204ENST00000424369 HES2Q9Y543 173 aa11.64□□□□□ -0.55
TRIM6-204ENST00000424369 PCDHB2Q9Y5E7 798 aa11.64□□□□□ -0.55
TRIM6-204ENST00000424369 MTCH2Q9Y6C9 303 aa11.64□□□□□ -0.55
TRIM6-204ENST00000424369 EYSQ5T1H1 3165 aa11.63□□□□□ -0.55
TRIM6-204ENST00000424369 MYO7AQ13402 2215 aa11.63□□□□□ -0.55
TRIM6-204ENST00000424369 A0A087X0B3 334 aa11.63□□□□□ -0.55
TRIM6-204ENST00000424369 CCDC169A6NNP5 214 aa11.63□□□□□ -0.55
TRIM6-204ENST00000424369 SPTLC2O15270 562 aa11.63□□□□□ -0.55
TRIM6-204ENST00000424369 ERLIN2O94905 339 aa11.63□□□□□ -0.55
TRIM6-204ENST00000424369 ARF4P18085 180 aaPredicted RBP11.63□□□□□ -0.55
TRIM6-204ENST00000424369 CTNNB1P35222 781 aa11.63□□□□□ -0.55
TRIM6-204ENST00000424369 PBX3P40426 434 aa11.63□□□□□ -0.55
TRIM6-204ENST00000424369 PEX3P56589 373 aa11.63□□□□□ -0.55
TRIM6-204ENST00000424369 POU5F1BQ06416 359 aa11.63□□□□□ -0.55
TRIM6-204ENST00000424369 GPM6BQ13491 265 aa11.63□□□□□ -0.55
TRIM6-204ENST00000424369 IFNLR1Q8IU57 520 aaPredicted RBP11.63□□□□□ -0.55
TRIM6-204ENST00000424369 CMTR2Q8IYT2 770 aaKnown RBP11.63□□□□□ -0.55
TRIM6-204ENST00000424369 CLP1Q92989 425 aaKnown RBP11.63□□□□□ -0.55
TRIM6-204ENST00000424369 CALML4Q96GE6 196 aa11.63□□□□□ -0.55
TRIM6-204ENST00000424369 ZNF396Q96N95 335 aaPredicted RBP11.63□□□□□ -0.55
TRIM6-204ENST00000424369 CCSER1Q9C0I3 900 aa11.63□□□□□ -0.55
TRIM6-204ENST00000424369 FZD8Q9H461 694 aa11.63□□□□□ -0.55
TRIM6-204ENST00000424369 ELAC1Q9H777 363 aaKnown RBP11.63□□□□□ -0.55
TRIM6-204ENST00000424369 ALG13Q9NP73 1137 aaKnown RBP11.63□□□□□ -0.55
TRIM6-204ENST00000424369 DACT1Q9NYF0 836 aa11.63□□□□□ -0.55
TRIM6-204ENST00000424369 GRM6O15303 877 aa11.62□□□□□ -0.55
TRIM6-204ENST00000424369 SLC16A4O15374 487 aa11.62□□□□□ -0.55
TRIM6-204ENST00000424369 OFD1O75665 1012 aa11.62□□□□□ -0.55
TRIM6-204ENST00000424369 BRD1O95696 1058 aa11.62□□□□□ -0.55
TRIM6-204ENST00000424369 DDIT3P35638 169 aa11.62□□□□□ -0.55
TRIM6-204ENST00000424369 NPTX2P47972 431 aa11.62□□□□□ -0.55
TRIM6-204ENST00000424369 SPOUT1Q5T280 376 aaKnown RBP11.62□□□□□ -0.55
TRIM6-204ENST00000424369 CDCA2Q69YH5 1023 aaPredicted RBP11.62□□□□□ -0.55
TRIM6-204ENST00000424369 AGMOQ6ZNB7 445 aa11.62□□□□□ -0.55
TRIM6-204ENST00000424369 GPBP1Q86WP2 473 aa11.62□□□□□ -0.55
TRIM6-204ENST00000424369 KRI1Q8N9T8 703 aaKnown RBP11.62□□□□□ -0.55
TRIM6-204ENST00000424369 SMG8Q8ND04 991 aaKnown RBP11.62□□□□□ -0.55
TRIM6-204ENST00000424369 RASSF8Q8NHQ8 419 aa11.62□□□□□ -0.55
TRIM6-204ENST00000424369 DEPTORQ8TB45 409 aa11.62□□□□□ -0.55
TRIM6-204ENST00000424369 RAD54LQ92698 747 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms