RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 C1GALT1Q9NS00 363 aa5.68□□□□□ -1.5
CDC42EP3-202ENST00000422687 MORF4L1Q9UBU8 362 aa5.68□□□□□ -1.5
CDC42EP3-202ENST00000422687 SFMBT1Q9UHJ3 866 aa5.68□□□□□ -1.5
CDC42EP3-202ENST00000422687 ZMYND8Q9ULU4 1186 aaPredicted RBP5.68□□□□□ -1.5
CDC42EP3-202ENST00000422687 DIS3Q9Y2L1 958 aaKnown RBP5.68□□□□□ -1.5
CDC42EP3-202ENST00000422687 MGAMO43451 1857 aa5.68□□□□□ -1.5
CDC42EP3-202ENST00000422687 PFASO15067 1338 aa5.68□□□□□ -1.5
CDC42EP3-202ENST00000422687 RPTORQ8N122 1335 aa5.68□□□□□ -1.5
CDC42EP3-202ENST00000422687 CHD9Q3L8U1 2897 aa5.68□□□□□ -1.5
CDC42EP3-202ENST00000422687 BDP1A6H8Y1 2624 aa5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 HMX2A2RU54 273 aa5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 KIAA1324LA8MWY0 1029 aaPredicted RBP5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 PARNO95453 639 aaKnown RBP5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 MAP4K4O95819 1239 aaPredicted RBP5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 PMLP29590 882 aa5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 HOXC12P31275 282 aa5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 CD97P48960 835 aa5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 RHBDL3P58872 404 aa5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 GABREP78334 506 aa5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 SNW1Q13573 536 aaKnown RBP5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 NTRK3Q16288 839 aa5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 SLC35F1Q5T1Q4 408 aa5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 BEND4Q6ZU67 534 aa5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 FAM214BQ7L5A3 538 aa5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 DDX42Q86XP3 938 aaKnown RBP eCLIP5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 ANKRD13CQ8N6S4 541 aa5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 SMCR8Q8TEV9 937 aaPredicted RBP5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 ZNF384Q8TF68 577 aa5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 DDX1Q92499 740 aaKnown RBP5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 TRIB2Q92519 343 aa5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 USP6NLQ92738 828 aa5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 CCDC140Q96MF4 163 aa5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 C11orf49Q9H6J7 331 aa5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 DENND2AQ9ULE3 1009 aa5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 LRRFIP2Q9Y608 721 aaKnown RBP5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 PTPRCP08575 1304 aa5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 ZNF521Q96K83 1311 aa5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 PHIPQ8WWQ0 1821 aa5.67□□□□□ -1.5
CDC42EP3-202ENST00000422687 PTPRFP10586 1907 aa5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 DOCK3Q8IZD9 2030 aa5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 GPR75-ASB3A0A0A6YYF3 556 aa5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 TRIM75PA6NK02 468 aa5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 EFCAB14O75071 495 aa5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 KCNH1O95259 989 aa5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 CNGA1P29973 690 aa5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 HOXA7P31268 230 aaPredicted RBP5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 PHKA1P46020 1223 aa5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 SPP2Q13103 211 aa5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 RRP1BQ14684 758 aaKnown RBP5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 SF1Q15637 639 aaKnown RBP5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 ATP2B3Q16720 1220 aa5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 C22orf34Q6ZV56 151 aa5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 BRAPQ7Z569 592 aa5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 PPM1KQ8N3J5 372 aa5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 FIBCD1Q8N539 461 aa5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 ZGPATQ8N5A5 531 aaKnown RBP5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 KCTD13Q8WZ19 329 aa5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 BRF1Q92994 677 aa5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 SCLYQ96I15 445 aa5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 GUCD1Q96NT3 240 aa5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 DUSP23Q9BVJ7 150 aa5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 OSBPL5Q9H0X9 879 aaPredicted RBP5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 ASCC2Q9H1I8 757 aaPredicted RBP5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 CYP26B1Q9NR63 512 aa5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 HOMER2Q9NSB8 354 aa5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 GNL3LQ9NVN8 582 aaKnown RBP5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.66□□□□□ -1.5
CDC42EP3-202ENST00000422687 LOC285556D6RIA3 1793 aa5.65□□□□□ -1.5
CDC42EP3-202ENST00000422687 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.65□□□□□ -1.5
CDC42EP3-202ENST00000422687 SIGLEC6O43699 453 aa5.65□□□□□ -1.5
CDC42EP3-202ENST00000422687 LRRN2O75325 713 aa5.65□□□□□ -1.5
CDC42EP3-202ENST00000422687 NPTXRO95502 500 aa5.65□□□□□ -1.5
CDC42EP3-202ENST00000422687 EYA4O95677 639 aa5.65□□□□□ -1.5
CDC42EP3-202ENST00000422687 S100BP04271 92 aaPredicted RBP5.65□□□□□ -1.5
CDC42EP3-202ENST00000422687 SYN1P17600 705 aa5.65□□□□□ -1.5
CDC42EP3-202ENST00000422687 CYP7A1P22680 504 aa5.65□□□□□ -1.5
CDC42EP3-202ENST00000422687 MAP4P27816 1152 aaKnown RBP5.65□□□□□ -1.5
CDC42EP3-202ENST00000422687 ZEB1P37275 1124 aaPredicted RBP5.65□□□□□ -1.5
CDC42EP3-202ENST00000422687 NFKB2Q00653 900 aa5.65□□□□□ -1.5
CDC42EP3-202ENST00000422687 CDK5R2Q13319 367 aa5.65□□□□□ -1.5
CDC42EP3-202ENST00000422687 CPSF6Q16630 551 aaKnown RBP eCLIP5.65□□□□□ -1.5
CDC42EP3-202ENST00000422687 LRRC26Q2I0M4 334 aa5.65□□□□□ -1.5
CDC42EP3-202ENST00000422687 MAMDC2Q7Z304 686 aaPredicted RBP5.65□□□□□ -1.5
CDC42EP3-202ENST00000422687 TOP6BLQ8N6T0 577 aa5.65□□□□□ -1.5
CDC42EP3-202ENST00000422687 DTWD2Q8NBA8 298 aa5.65□□□□□ -1.5
CDC42EP3-202ENST00000422687 KREMEN2Q8NCW0 462 aa5.65□□□□□ -1.5
CDC42EP3-202ENST00000422687 SOCS4Q8WXH5 440 aa5.65□□□□□ -1.5
CDC42EP3-202ENST00000422687 PTPRN2Q92932 1015 aa5.65□□□□□ -1.5
CDC42EP3-202ENST00000422687 Q96M66 194 aa5.65□□□□□ -1.5
CDC42EP3-202ENST00000422687 KCNF1Q9H3M0 494 aa5.65□□□□□ -1.5
CDC42EP3-202ENST00000422687 NOL6Q9H6R4 1146 aaKnown RBP5.65□□□□□ -1.5
CDC42EP3-202ENST00000422687 GFOD1Q9NXC2 390 aa5.65□□□□□ -1.5
CDC42EP3-202ENST00000422687 MCM8Q9UJA3 840 aa5.65□□□□□ -1.5
CDC42EP3-202ENST00000422687 FBXL21Q9UKT6 434 aa5.65□□□□□ -1.5
CDC42EP3-202ENST00000422687 MROH7-TTC4A0A0A0MT08 1334 aa5.65□□□□□ -1.51
CDC42EP3-202ENST00000422687 PLXNB2O15031 1838 aa5.64□□□□□ -1.51
CDC42EP3-202ENST00000422687 DOCK2Q92608 1830 aa5.64□□□□□ -1.51
CDC42EP3-202ENST00000422687 DOCK1Q14185 1865 aa5.64□□□□□ -1.51
CDC42EP3-202ENST00000422687 PRR19A6NJB7 356 aa5.64□□□□□ -1.51
CDC42EP3-202ENST00000422687 ALG1L2C9J202 215 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms